Heatmap tool

clustering method

distance

figure_xsize

figure_ysize

font_scale

color map

center value

max value

min value

Sample clustering

robust

This tool uses seaborn.clustermap. Please refer to the seaborn developer's page ("https://seaborn.pydata.org/) for information on how to set parameters.

Input data

(sample data)Nbe.v1.1 ID,mature apical region,stem 0-3 cm,stem 3-6 cm,stem 6-9 cm,stem 9-12 cm,young leaves,young petioles,mature leaves,mature petioles,flowers,mature roots,seedling apical meristems,seedling cotyledons,seedling hypocotyls,seedling roots
Nbe.v1.1.chr17g00670,54.883502,107.8686447,127.4554777,146.483078,130.8369013,40.921693,69.33952333,16.28238167,126.03377,58.17631667,47.29566833,53.919001,18.72284833,112.6344707,75.50176233
Nbe.v1.1.chr17g01710,73.86203,3.004882667,0.250904333,0.446007333,1.80603,36.60574967,2.253539,0.208704333,0.165197,36.92396233,17.195055,31.23978333,2.613645667,1.984833,1.214208667
Nbe.v1.1.chr17g02190,1.024452667,8.333327667,12.32448667,9.371369333,4.281266667,3.639785333,5.293682333,3.831377,6.316324333,42.96534567,12.18860867,0.0,0.0,0.0,0.0
Nbe.v1.1.chr17g05250,21.58359733,68.525186,74.097519,84.420237,84.16454833,20.20509,57.34016667,11.237349,85.90513133,13.753611,35.78918333,18.539338,6.547956,24.46896867,15.78462067
Nbe.v1.1.chr17g25300,69.93221067,235.5707803,266.3237917,283.8569133,280.2263387,62.91804,225.0176797,54.370416,269.6385547,57.82129,158.9917197,75.41451533,18.198412,122.691551,96.12923933
Nbe.v1.1.chr17g52390,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr06g32500,5.486984333,22.32404967,22.47439567,22.40146667,20.14153033,7.648247667,23.91979133,1.800192333,37.79386467,1.852988667,5.459726333,3.260803333,1.18046,10.92937333,24.401013
Nbe.v1.1.chr05g02200,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr05g03090,0.177262333,20.45108333,21.43968333,9.755223333,4.856175,0.731096333,18.975138,0.988590333,46.78410033,0.308223333,0.891172,1.766366667,0.102967667,5.124488667,1.704152
Nbe.v1.1.chr05g11980,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr05g16290,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr05g32600,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr09g16830,120.4351377,13.02015267,0.254002,0.191994,0.150833333,4.004160333,6.982949667,0.025347,0.173148,305.5295513,0.263804333,41.679011,0.758161333,4.839678333,1.485510667
Nbe.v1.1.chr09g26290,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.004241,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr09g26620,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.020775333
Nbe.v1.1.chr09g26770,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr09g26940,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr10g21640,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,4.440492667,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr10g30560,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr10g40920,0.774227667,4.567765333,6.068863667,4.186368,1.832462,0.995164,2.612532,1.357656333,2.149839333,7.161727333,4.554760667,0.112253667,0.0,0.0,0.0
Nbe.v1.1.chr10g41730,12.83446967,29.51992167,33.461504,33.33544233,27.52620433,10.49097967,17.847878,6.676901333,28.13432667,16.24379,12.441013,14.99816633,7.506684,27.03107533,16.37845133
Nbe.v1.1.chr10g41740,59.96055467,152.6401113,169.2171633,171.9029543,154.400655,59.12197767,91.433922,32.26212933,146.7026317,85.91904967,71.06369033,94.821953,44.96423467,164.728887,100.6567383
Nbe.v1.1.chr19g13580,47.26529567,35.533015,48.82314067,59.760166,58.552011,25.64226033,13.66734067,2.706805333,7.318563667,42.22924067,88.503891,64.211699,10.764127,46.59172933,29.91378733
Nbe.v1.1.chr19g24930,3.573372,20.897204,15.491829,11.93076033,9.060463,4.798283333,21.72701633,2.778897667,42.841922,4.569062667,2.175171667,1.859292,0.394995667,7.823276667,21.050339
Nbe.v1.1.chr19g45110,0.032487,0.0,0.060445333,0.0,0.0,0.071902667,0.0,0.032100667,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr12g14770,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr12g19250,0.0,0.0,0.006899667,0.0,0.008074333,0.0,0.0,0.0,0.0,0.0,0.0,0.064660667,0.048504667,0.0,0.0
Nbe.v1.1.chr12g30840,0.129292667,0.02823,0.0,0.047144,0.0,0.0,0.090508333,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.065322
Nbe.v1.1.chr12g41820,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr08g03190,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr08g09450,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr02g12100,1.753644,0.607162667,0.503626,0.414901667,0.637442333,1.906153667,0.864901667,0.452291333,0.304506,0.959873667,0.434169,3.195954,1.706097333,1.294975,1.694519
Nbe.v1.1.chr02g19160,0.358552,0.136522667,0.251448333,0.061767333,0.0,0.828767,0.802472333,0.241747333,0.126686333,0.480824333,0.0,0.798784333,3.263253667,1.494495333,0.0
Nbe.v1.1.chr02g41890,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr02g43860,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.007632333,0.002734333,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr07g21090,38.36489,189.4984587,204.7264963,230.4476727,256.444687,49.40571467,156.3166757,48.01681767,254.9211987,35.577146,148.7517803,47.22075533,15.350987,106.9440003,89.21367633
Nbe.v1.1.chr07g25000,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr18g07070,5.288147333,35.06111733,27.64658333,23.544487,17.03301733,4.324086333,22.687783,3.601911333,29.94222767,12.16875633,5.050251333,12.744842,0.484373333,16.82999033,1.675662667
Nbe.v1.1.chr18g10090,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr13g17470,0.0,0.177401667,0.52402,0.257852333,0.0,0.0,0.0,0.418927667,0.252246333,0.684770333,0.757117333,0.0,0.367206333,0.0,6.957799333
Nbe.v1.1.chr04g12830,22.74052233,67.02718333,73.31142933,84.123962,75.09386467,23.374702,57.20115433,12.58024033,83.63557967,15.84942367,22.78256567,22.61998233,6.344358,23.14848767,14.39219767
Nbe.v1.1.chr04g26260,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.118718,1.309779,0.0,0.0,0.0,44.06393433
Nbe.v1.1.chr14g10910,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr14g12670,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.313933667,0.613664667,0.0,0.0,0.0,68.62399133
Nbe.v1.1.chr14g34930,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr14g35180,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr14g35300,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr03g05040,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr03g13420,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr03g13560,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.109708667
Nbe.v1.1.chr03g21630,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr03g30690,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr03g44190,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr01g11290,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr01g12710,84.071406,64.843399,15.317197,9.776069667,3.966282667,17.89114467,30.04692267,1.014240667,2.036628333,113.8891373,8.487945,105.3153023,3.112441333,34.456534,32.79329167
Nbe.v1.1.chr01g14960,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr01g19430,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr01g26090,16.112284,38.848816,50.71294533,68.17648433,76.211591,21.088374,27.46796733,23.437112,48.88098,26.71316767,146.0184783,30.28282467,36.36767567,80.679189,48.862966
Nbe.v1.1.chr01g40600,0.019659,0.01507,0.017764667,0.003426333,0.005544,0.0,0.0,0.0,0.009021333,0.020898333,0.009399667,0.050098333,0.016194333,0.168750333,0.034151333
Nbe.v1.1.chr01g44520,15.53857133,10.74438767,8.357058,5.729275,5.026866,9.407933333,16.25217733,1.42846,4.338900667,5.853940333,3.000646333,24.07448667,3.649106,9.286018667,5.849008667
Nbe.v1.1.chr11g04940,118.012047,68.29751433,19.816702,16.49085567,12.994995,43.024422,51.13662333,3.765561333,6.628176333,40.07390467,22.80277967,99.442444,11.878314,37.72565333,30.01860167
Nbe.v1.1.chr11g16300,5.616293667,1.895407667,0.701073333,0.141894,0.126431667,1.449755333,2.509077,0.217879667,0.148160667,3.779767,0.329745333,6.773352667,0.408895667,3.993967,1.693415667
Nbe.v1.1.chr11g18080,24.217269,57.432826,65.95634967,82.30887367,81.050059,30.81103,43.30136333,35.21650633,74.18842333,44.08004133,94.68419867,34.419434,51.4882,97.42119833,54.69880333
Nbe.v1.1.chr11g37270,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.010997,0.0,0.0,0.0,0.0,0.0,0.021737667
Nbe.v1.1.chr16g23880,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr15g12810,0.626354,8.139906667,6.218566333,3.56413,1.688035,1.026795667,15.19471467,0.941958667,29.565054,0.301553667,0.508732,0.979147333,0.047286667,1.883085333,1.093367333
Nbe.v1.1.chr15g24000,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr15g37030,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr08g09560,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
Nbe.v1.1.chr03g18250,1.331170667,5.838363,13.49401733,18.93916433,21.45048,0.510697333,1.729838667,0.640999333,2.65552,14.60586467,25.346604,5.563133333,0.426358,25.35447933,62.77557767
Nbe.v1.1.chr11g34660,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0

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