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Expression in Grafting Time series
Expression in Agroinfiltration
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Differentially Expressed Gene Analysis
Group A
- Select -
Intact stem
2 HAG
1 DAG
3 DAG
5 DAG
7 DAG
14 DAG
28 DAG
Mature apical regions
Stem 0-3 cm
Stem 3-6 cm
Stem 6-9 cm
Stem 9-12 cm
Young leaves
Young petioles
Mature leaves
Mature Petioles
Flowers
Mature roots
Seedling apical meristems
Seedling cotyledons
Seedling hypocotyls
Seedling roots
Buffer control
Agroinfiltrated
Group B
- Select -
Intact stem
2 HAG
1 DAG
3 DAG
5 DAG
7 DAG
14 DAG
28 DAG
Mature apical regions
Stem 0-3 cm
Stem 3-6 cm
Stem 6-9 cm
Stem 9-12 cm
Young leaves
Young petioles
Mature leaves
Mature Petioles
Flowers
Mature roots
Seedling apical meristems
Seedling cotyledons
Seedling hypocotyls
Seedling roots
Buffer control
Agroinfiltrated
Parameters
pseudo count
Exp count limit
p-value (FDR) threshold
Log2FC threshold
Figure settings
color map
RdBu_r
YlOrBr
YlOrRd
Reds
jet
figure_xsize
figure_ysize
Remarkable gene FC
RNAseq data were mapped with HISAT2 and expression quantified with StringTie. Data were obtained as raw counts. Differential expression analysis (DEA) is performed with PyDEseq2.
Please select Group_A and Group_B
×
Please select Group_A and Group_B
