N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 5

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
81516	Nbe.v1.1.chr10g17460	Nbe.v1.1.chr10g17460.1	Nbe.v1.s00050g17460	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:60983787-60984632	+	Niben101Scf01834g02012.1	AT2G34930.1	disease resistance family protein / LRR family protein	disease resistance family protein / LRR family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
81517	Nbe.v1.1.chr10g17470	Nbe.v1.1.chr10g17470.1	Nbe.v1.s00050g17470	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:60990288-60991808	+	Niben101Scf01834g02012.1	AT2G25470.1	receptor like protein 21	receptor like protein 21	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
81518	Nbe.v1.1.chr10g17480	Nbe.v1.1.chr10g17480.1	Nbe.v1.s00050g17480	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:61012948-61014465	-	Niben101Scf01834g02003.1	AT1G07390.2	receptor like protein 1	receptor like protein 1	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
81519	Nbe.v1.1.chr10g17490	Nbe.v1.1.chr10g17490.1	Nbe.v1.s00050g17490	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:61015710-61017119	-	Niben101Scf01834g02009.1	AT2G34930.1	disease resistance family protein / LRR family protein	disease resistance family protein / LRR family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
9973	Nbe.v1.1.chr12g18080	Nbe.v1.1.chr12g18080.1	Nbe.v1.s00070g18080	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr12:78379576-78382656	+	Niben101Scf03138g01049.1	AT2G34930.1	disease resistance family protein / LRR family protein	disease resistance family protein / LRR family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries