N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 38

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g04880
Nbe.v1.1.chr17g04880.1
Nbe.v1.s00010g04880
Nbe.v1.1.chr17:172715152-172735533
+
Niben101Scf01205g03001.1
LSD1-like 3
NULL
Nbe.v1.1.chr17g16330
Nbe.v1.1.chr17g16330.1
Nbe.v1.s00010g16330
Nbe.v1.1.chr17:135126450-135126752
+
ubiquitin carboxyl-terminal hydrolase-like protein%2C putative (DUF627 and DUF629)
Protein with domains of unknown function (DUF627 and DUF629)
Nbe.v1.1.chr17g19780
Nbe.v1.1.chr17g19780.1
Nbe.v1.s00010g19780
Nbe.v1.1.chr17:119953172-119957522
+
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit
Ankyrin repeat family protein
Nbe.v1.1.chr17g28810
Nbe.v1.1.chr17g28810.1
Nbe.v1.s00010g28810
Nbe.v1.1.chr17:88164329-88171477
+
Niben101Scf05078g06007.1
proline-rich extensin-like receptor kinase 10
proline-rich extensin-like receptor kinase 10
Nbe.v1.1.chr17g31990
Nbe.v1.1.chr17g31990.1
Nbe.v1.s00010g31990
Nbe.v1.1.chr17:77424108-77425331
+
No description
Nbe.v1.1.chr06g25800
Nbe.v1.1.chr06g25800.1
Nbe.v1.s00020g25800
Nbe.v1.1.chr06:60435696-60445067
+
Exostosin family protein
Exostosin family protein
Nbe.v1.1.chr06g33870
Nbe.v1.1.chr06g33870.1
Nbe.v1.s00020g33870
Nbe.v1.1.chr06:31256820-31261117
+
NPK1-related protein kinase 1
NPK1-related protein kinase 1
Nbe.v1.1.chr05g21200
Nbe.v1.1.chr05g21200.1
Nbe.v1.s00030g21200
Nbe.v1.1.chr05:72995149-72996721
-
Niben101Scf06089g00009.1
zinc knuckle (CCHC-type) family protein
zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr05g30820
Nbe.v1.1.chr05g30820.1
Nbe.v1.s00030g30820
Nbe.v1.1.chr05:110207043-110209474
-
No description
Nbe.v1.1.chr09g11730
Nbe.v1.1.chr09g11730.1
Nbe.v1.s00040g11730
Nbe.v1.1.chr09:109152188-109153860
+
No description
Nbe.v1.1.chr09g20100
Nbe.v1.1.chr09g20100.1
Nbe.v1.s00040g20100
Nbe.v1.1.chr09:80941025-80941354
-
Niben101Scf02172g06022.1
Kinase interacting (KIP1-like) family protein
Kinase interacting (KIP1-like) family protein
Nbe.v1.1.chr10g16330
Nbe.v1.1.chr10g16330.1
Nbe.v1.s00050g16330
Nbe.v1.1.chr10:57188675-57191336
+
Niben101Scf01105g01021.1
GATA transcription factor 10
GATA transcription factor 10
Nbe.v1.1.chr10g18010
Nbe.v1.1.chr10g18010.1
Nbe.v1.s00050g18010
Nbe.v1.1.chr10:62783983-62789212
-
Niben101Scf07227g02008.1
Pre-mRNA-splicing factor 3
NULL
Nbe.v1.1.chr10g32020
Nbe.v1.1.chr10g32020.1
Nbe.v1.s00050g32020
Nbe.v1.1.chr10:108679940-108681340
+
cysteine-rich RECEPTOR-like kinase
NULL
Nbe.v1.1.chr19g07060
Nbe.v1.1.chr19g07060.1
Nbe.v1.s00060g07060
Nbe.v1.1.chr19:117087785-117095408
-
No description
Nbe.v1.1.chr19g09010
Nbe.v1.1.chr19g09010.1
Nbe.v1.s00060g09010
Nbe.v1.1.chr19:109286909-109290746
+
Niben101Scf08259g01002.1
No description
Nbe.v1.1.chr19g12560
Nbe.v1.1.chr19g12560.1
Nbe.v1.s00060g12560
Nbe.v1.1.chr19:94878540-94880645
-
Chaperone DnaJ-domain superfamily protein
Chaperone DnaJ-domain superfamily protein
Nbe.v1.1.chr19g13100
Nbe.v1.1.chr19g13100.1
Nbe.v1.s00060g13100
Nbe.v1.1.chr19:93217216-93225614
+
Niben101Scf04329g05020.1
RNA-binding (RRM/RBD/RNP motifs) family protein
NULL
Nbe.v1.1.chr12g09200
Nbe.v1.1.chr12g09200.1
Nbe.v1.s00070g09200
Nbe.v1.1.chr12:110474933-110475181
+
hypothetical protein
NULL
Nbe.v1.1.chr12g23890
Nbe.v1.1.chr12g23890.1
Nbe.v1.s00070g23890
Nbe.v1.1.chr12:61255161-61261423
+
No description
Nbe.v1.1.chr12g43550
Nbe.v1.1.chr12g43550.1
Nbe.v1.s00070g43550
Nbe.v1.1.chr12:2988611-2995740
-
Niben101Scf09792g03017.1
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
NULL
Nbe.v1.1.chr08g00010
Nbe.v1.1.chr08g00010.1
Nbe.v1.s00080g00010
Nbe.v1.1.chr08:68238-68477
-
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr08g31430
Nbe.v1.1.chr08g31430.1
Nbe.v1.s00080g31430
Nbe.v1.1.chr08:113654689-113656565
-
No description
Nbe.v1.1.chr08g31440
Nbe.v1.1.chr08g31440.1
Nbe.v1.s00080g31440
Nbe.v1.1.chr08:113656611-113660899
-
No description
Nbe.v1.1.chr07g23940
Nbe.v1.1.chr07g23940.1
Nbe.v1.s00100g23940
Nbe.v1.1.chr07:49534236-49535691
+
No description
Nbe.v1.1.chr07g34420
Nbe.v1.1.chr07g34420.1
Nbe.v1.s00100g34420
Nbe.v1.1.chr07:10879062-10888497
+
Niben101Scf00209g00009.1
C-terminal domain phosphatase-like 4
C-terminal domain phosphatase-like 4
Nbe.v1.1.chr18g14280
Nbe.v1.1.chr18g14280.1
Nbe.v1.s00110g14280
Nbe.v1.1.chr18:94892422-94895683
+
No description
Nbe.v1.1.chr18g31240
Nbe.v1.1.chr18g31240.1
Nbe.v1.s00110g31240
Nbe.v1.1.chr18:36588838-36596262
-
No description
Nbe.v1.1.chr13g02190
Nbe.v1.1.chr13g02190.1
Nbe.v1.s00120g02190
Nbe.v1.1.chr13:6186227-6197093
+
Niben101Scf00209g00009.1
C-terminal domain phosphatase-like 4
C-terminal domain phosphatase-like 4
Nbe.v1.1.chr04g08170
Nbe.v1.1.chr04g08170.1
Nbe.v1.s00130g08170
Nbe.v1.1.chr04:93891591-93902766
-
Niben101Scf06261g03005.1
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr04g12440
Nbe.v1.1.chr04g12440.1
Nbe.v1.s00130g12440
Nbe.v1.1.chr04:75227112-75240489
+
Niben101Scf01205g03001.1
LSD1-like 3
NULL
Nbe.v1.1.chr04g32420
Nbe.v1.1.chr04g32420.1
Nbe.v1.s00130g32420
Nbe.v1.1.chr04:7384709-7395664
-
Niben101Scf00449g03001.1
P-glycoprotein 20
P-glycoprotein 20
Nbe.v1.1.chr14g14420
Nbe.v1.1.chr14g14420.1
Nbe.v1.s00140g14420
Nbe.v1.1.chr14:82432319-82432645
-
No description
Nbe.v1.1.chr14g18820
Nbe.v1.1.chr14g18820.1
Nbe.v1.s00140g18820
Nbe.v1.1.chr14:70926870-70937599
+
Niben101Scf00449g03001.1
P-glycoprotein 20
P-glycoprotein 20
Nbe.v1.1.chr03g36130
Nbe.v1.1.chr03g36130.1
Nbe.v1.s00150g36130
Nbe.v1.1.chr03:115138044-115141067
+
Niben101Scf00063g04015.1
actin binding protein
actin binding
Nbe.v1.1.chr16g00930
Nbe.v1.1.chr16g00930.1
Nbe.v1.s00180g00930
Nbe.v1.1.chr16:71256726-71259014
+
Niben101Scf00039g01010.1
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr15g01320
Nbe.v1.1.chr15g01320.1
Nbe.v1.s00190g01320
Nbe.v1.1.chr15:173244021-173252119
+
No description
Nbe.v1.1.chr15g10080
Nbe.v1.1.chr15g10080.1
Nbe.v1.s00190g10080
Nbe.v1.1.chr15:143676530-143677545
-
Pre-mRNA cleavage complex II
Pre-mRNA cleavage complex II