N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 12

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g07680
Nbe.v1.1.chr06g07680.1
Nbe.v1.s00020g07680
Nbe.v1.1.chr06:128110372-128111488
+
myosin
NULL
Nbe.v1.1.chr08g03530
Nbe.v1.1.chr08g03530.1
Nbe.v1.s00080g03530
Nbe.v1.1.chr08:10442456-10444729
+
GRAS family transcription factor
GRAS family transcription factor
Nbe.v1.1.chr07g02470
Nbe.v1.1.chr07g02470.1
Nbe.v1.s00100g02470
Nbe.v1.1.chr07:135865986-135868008
-
Rad21/Rec8-like family protein
Rad21/Rec8-like family protein
Nbe.v1.1.chr07g26600
Nbe.v1.1.chr07g26600.1
Nbe.v1.s00100g26600
Nbe.v1.1.chr07:39005654-39006112
-
DEA(D/H)-box RNA helicase family protein
DEA(D/H)-box RNA helicase family protein
Nbe.v1.1.chr07g33250
Nbe.v1.1.chr07g33250.1
Nbe.v1.s00100g33250
Nbe.v1.1.chr07:14042080-14042376
-
Transcriptional factor B3 family protein
Transcriptional factor B3 family protein
Nbe.v1.1.chr07g36450
Nbe.v1.1.chr07g36450.1
Nbe.v1.s00100g36450
Nbe.v1.1.chr07:3653983-3655809
+
hypothetical protein
NULL
Nbe.v1.1.chr18g05480
Nbe.v1.1.chr18g05480.1
Nbe.v1.s00110g05480
Nbe.v1.1.chr18:124476473-124477541
-
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Nbe.v1.1.chr13g29870
Nbe.v1.1.chr13g29870.1
Nbe.v1.s00120g29870
Nbe.v1.1.chr13:88218615-88219943
+
Transducin/WD40 repeat-like superfamily protein
NULL
Nbe.v1.1.chr13g47910
Nbe.v1.1.chr13g47910.1
Nbe.v1.s00120g47910
Nbe.v1.1.chr13:137684592-137685395
+
CDK-activating kinase 1AT
NULL
Nbe.v1.1.chr03g09690
Nbe.v1.1.chr03g09690.1
Nbe.v1.s00150g09690
Nbe.v1.1.chr03:31616639-31617981
-
global transcription factor group A2
global transcription factor group A2
Nbe.v1.1.chr15g05560
Nbe.v1.1.chr15g05560.1
Nbe.v1.s00190g05560
Nbe.v1.1.chr15:160392267-160392944
-
hydroxyproline-rich glycoprotein family protein
hydroxyproline-rich glycoprotein family protein
Nbe.v1.1.chr15g05570
Nbe.v1.1.chr15g05570.1
Nbe.v1.s00190g05570
Nbe.v1.1.chr15:160390643-160391982
-
Niben101Scf08441g00001.1
No description