N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 18

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g07680
Nbe.v1.1.chr06g07680.1
Nbe.v1.s00020g07680
Nbe.v1.1.chr06:128110372-128111488
+
myosin
NULL
Nbe.v1.1.chr06g25700
Nbe.v1.1.chr06g25700.1
Nbe.v1.s00020g25700
Nbe.v1.1.chr06:60676090-60677431
+
No description
Nbe.v1.1.chr12g14180
Nbe.v1.1.chr12g14180.1
Nbe.v1.s00070g14180
Nbe.v1.1.chr12:91418142-91419523
-
No description
Nbe.v1.1.chr12g25680
Nbe.v1.1.chr12g25680.1
Nbe.v1.s00070g25680
Nbe.v1.1.chr12:54790784-54791309
-
No description
Nbe.v1.1.chr08g01070
Nbe.v1.1.chr08g01070.1
Nbe.v1.s00080g01070
Nbe.v1.1.chr08:2932812-2933066
-
DNA/RNA polymerases superfamily protein
DNA/RNA polymerases superfamily protein
Nbe.v1.1.chr08g03530
Nbe.v1.1.chr08g03530.1
Nbe.v1.s00080g03530
Nbe.v1.1.chr08:10442456-10444729
+
GRAS family transcription factor
GRAS family transcription factor
Nbe.v1.1.chr07g26590
Nbe.v1.1.chr07g26590.1
Nbe.v1.s00100g26590
Nbe.v1.1.chr07:39006158-39015092
-
temperature-induced lipocalin
temperature-induced lipocalin
Nbe.v1.1.chr07g33260
Nbe.v1.1.chr07g33260.1
Nbe.v1.s00100g33260
Nbe.v1.1.chr07:14040513-14041994
-
No description
Nbe.v1.1.chr07g36440
Nbe.v1.1.chr07g36440.1
Nbe.v1.s00100g36440
Nbe.v1.1.chr07:3655937-3659062
+
No description
Nbe.v1.1.chr07g36450
Nbe.v1.1.chr07g36450.1
Nbe.v1.s00100g36450
Nbe.v1.1.chr07:3653983-3655809
+
hypothetical protein
NULL
Nbe.v1.1.chr18g05480
Nbe.v1.1.chr18g05480.1
Nbe.v1.s00110g05480
Nbe.v1.1.chr18:124476473-124477541
-
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Nbe.v1.1.chr13g29890
Nbe.v1.1.chr13g29890.1
Nbe.v1.s00120g29890
Nbe.v1.1.chr13:88220419-88220802
+
CAP (Cysteine-rich secretory proteins%2C Antigen 5%2C and Pathogenesis-related 1 protein) superfamily protein
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Nbe.v1.1.chr13g42730
Nbe.v1.1.chr13g42730.1
Nbe.v1.s00120g42730
Nbe.v1.1.chr13:120604943-120605290
+
ATP-dependent caseinolytic (Clp) protease/crotonase family protein
NULL
Nbe.v1.1.chr13g47910
Nbe.v1.1.chr13g47910.1
Nbe.v1.s00120g47910
Nbe.v1.1.chr13:137684592-137685395
+
CDK-activating kinase 1AT
NULL
Nbe.v1.1.chr14g14790
Nbe.v1.1.chr14g14790.1
Nbe.v1.s00140g14790
Nbe.v1.1.chr14:81494144-81496286
-
Protein phosphatase 2C family protein
Protein phosphatase 2C family protein
Nbe.v1.1.chr03g09690
Nbe.v1.1.chr03g09690.1
Nbe.v1.s00150g09690
Nbe.v1.1.chr03:31616639-31617981
-
global transcription factor group A2
global transcription factor group A2
Nbe.v1.1.chr15g05560
Nbe.v1.1.chr15g05560.1
Nbe.v1.s00190g05560
Nbe.v1.1.chr15:160392267-160392944
-
hydroxyproline-rich glycoprotein family protein
hydroxyproline-rich glycoprotein family protein
Nbe.v1.1.chr15g05570
Nbe.v1.1.chr15g05570.1
Nbe.v1.s00190g05570
Nbe.v1.1.chr15:160390643-160391982
-
Niben101Scf08441g00001.1
No description