N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 9

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g01930
Nbe.v1.1.chr17g01930.1
Nbe.v1.s00010g01930
Nbe.v1.1.chr17:180221445-180224210
-
Niben101Scf08819g01014.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr17g39920
Nbe.v1.1.chr17g39920.1
Nbe.v1.s00010g39920
Nbe.v1.1.chr17:43732794-43733315
+
Niben101Scf02210g09008.1
DNAJ heat shock N-terminal domain-containing protein
DNAJ heat shock N-terminal domain-containing protein
Nbe.v1.1.chr05g04520
Nbe.v1.1.chr05g04520.1
Nbe.v1.s00030g04520
Nbe.v1.1.chr05:17034948-17037146
+
Niben101Scf13036g00009.1
heat shock transcription factor A3
NULL
Nbe.v1.1.chr10g41230
Nbe.v1.1.chr10g41230.1
Nbe.v1.s00050g41230
Nbe.v1.1.chr10:140236977-140239737
-
Niben101Scf08819g01014.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr19g03210
Nbe.v1.1.chr19g03210.1
Nbe.v1.s00060g03210
Nbe.v1.1.chr19:133643538-133644284
-
Niben101Scf03488g12009.1
No description
Nbe.v1.1.chr19g07740
Nbe.v1.1.chr19g07740.1
Nbe.v1.s00060g07740
Nbe.v1.1.chr19:114883966-114885860
+
Pentatricopeptide repeat (PPR-like) superfamily protein
Pentatricopeptide repeat (PPR-like) superfamily protein
Nbe.v1.1.chr02g12660
Nbe.v1.1.chr02g12660.1
Nbe.v1.s00090g12660
Nbe.v1.1.chr02:115545689-115559039
-
Niben101Scf01395g04002.1
cleavage and polyadenylation specificity factor 30
cleavage and polyadenylation specificity factor 30
Nbe.v1.1.chr07g13430
Nbe.v1.1.chr07g13430.1
Nbe.v1.s00100g13430
Nbe.v1.1.chr07:85269781-85271517
+
proline-rich protein 1
proline-rich protein 1
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3