N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 33

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g28760
Nbe.v1.1.chr17g28760.1
Nbe.v1.s00010g28760
Nbe.v1.1.chr17:88251524-88258379
-
No description
Nbe.v1.1.chr17g40240
Nbe.v1.1.chr17g40240.1
Nbe.v1.s00010g40240
Nbe.v1.1.chr17:42928180-42930990
-
Niben101Scf01998g07001.1
indeterminate(ID)-domain 7
NULL
Nbe.v1.1.chr17g46240
Nbe.v1.1.chr17g46240.1
Nbe.v1.s00010g46240
Nbe.v1.1.chr17:21139602-21141010
-
SART-1 family
NULL
Nbe.v1.1.chr06g04810
Nbe.v1.1.chr06g04810.1
Nbe.v1.s00020g04810
Nbe.v1.1.chr06:137430265-137431626
+
Niben101Scf00207g03002.1
hypothetical protein
NULL
Nbe.v1.1.chr06g22870
Nbe.v1.1.chr06g22870.1
Nbe.v1.s00020g22870
Nbe.v1.1.chr06:71171880-71180968
-
Niben101Scf02915g08013.1
syntaxin of plants 81
syntaxin of plants 81
Nbe.v1.1.chr09g34980
Nbe.v1.1.chr09g34980.1
Nbe.v1.s00040g34980
Nbe.v1.1.chr09:30100900-30101777
-
Niben101Scf07466g02010.1
RAP
RAP
Nbe.v1.1.chr09g34990
Nbe.v1.1.chr09g34990.1
Nbe.v1.s00040g34990
Nbe.v1.1.chr09:30098688-30100886
-
Niben101Scf07466g02010.1
RAP
RAP
Nbe.v1.1.chr09g40570
Nbe.v1.1.chr09g40570.1
Nbe.v1.s00040g40570
Nbe.v1.1.chr09:7540542-7544938
+
No description
Nbe.v1.1.chr10g31590
Nbe.v1.1.chr10g31590.1
Nbe.v1.s00050g31590
Nbe.v1.1.chr10:107059114-107060541
+
31-kDa RNA binding protein
NULL
Nbe.v1.1.chr19g11260
Nbe.v1.1.chr19g11260.1
Nbe.v1.s00060g11260
Nbe.v1.1.chr19:100485273-100528785
-
Niben101Scf00460g04028.1
ARM repeat superfamily protein
NULL
Nbe.v1.1.chr19g11270
Nbe.v1.1.chr19g11270.1
Nbe.v1.s00060g11270
Nbe.v1.1.chr19:100424886-100473667
-
Niben101Scf00460g04029.1
ARM repeat superfamily protein
NULL
Nbe.v1.1.chr12g22500
Nbe.v1.1.chr12g22500.1
Nbe.v1.s00070g22500
Nbe.v1.1.chr12:65913603-65915444
-
No description
Nbe.v1.1.chr08g01960
Nbe.v1.1.chr08g01960.1
Nbe.v1.s00080g01960
Nbe.v1.1.chr08:6244888-6246723
+
BRI1 like
BRI1 like
Nbe.v1.1.chr08g16280
Nbe.v1.1.chr08g16280.1
Nbe.v1.s00080g16280
Nbe.v1.1.chr08:56545958-56547982
+
No description
Nbe.v1.1.chr08g19350
Nbe.v1.1.chr08g19350.1
Nbe.v1.s00080g19350
Nbe.v1.1.chr08:70397959-70401783
-
Niben101Scf05653g00004.1
trichome birefringence-like protein (DUF828)
Plant protein of unknown function (DUF828)
Nbe.v1.1.chr08g31440
Nbe.v1.1.chr08g31440.1
Nbe.v1.s00080g31440
Nbe.v1.1.chr08:113656611-113660899
-
No description
Nbe.v1.1.chr02g04020
Nbe.v1.1.chr02g04020.1
Nbe.v1.s00090g04020
Nbe.v1.1.chr02:134863884-134872991
+
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr02g30530
Nbe.v1.1.chr02g30530.1
Nbe.v1.s00090g30530
Nbe.v1.1.chr02:63090492-63091015
+
Niben101Scf02990g02012.1
poly ADP-ribose polymerase 3
NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases
Nbe.v1.1.chr18g15170
Nbe.v1.1.chr18g15170.1
Nbe.v1.s00110g15170
Nbe.v1.1.chr18:91688049-91692500
-
hypothetical protein
NULL
Nbe.v1.1.chr13g21510
Nbe.v1.1.chr13g21510.1
Nbe.v1.s00120g21510
Nbe.v1.1.chr13:66845153-66845557
+
No description
Nbe.v1.1.chr04g13230
Nbe.v1.1.chr04g13230.1
Nbe.v1.s00130g13230
Nbe.v1.1.chr04:71930442-71931155
-
hypothetical protein
NULL
Nbe.v1.1.chr14g02220
Nbe.v1.1.chr14g02220.1
Nbe.v1.s00140g02220
Nbe.v1.1.chr14:125068907-125071739
-
Niben101Scf01664g02019.1
No description
Nbe.v1.1.chr14g30010
Nbe.v1.1.chr14g30010.1
Nbe.v1.s00140g30010
Nbe.v1.1.chr14:37376239-37382992
+
Niben101Scf01339g06013.1
inositol transporter 1
inositol transporter 1
Nbe.v1.1.chr14g40110
Nbe.v1.1.chr14g40110.1
Nbe.v1.s00140g40110
Nbe.v1.1.chr14:6441897-6445378
-
No description
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr11g04690
Nbe.v1.1.chr11g04690.1
Nbe.v1.s00170g04690
Nbe.v1.1.chr11:118408551-118420310
-
Niben101Scf04941g03015.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr11g28180
Nbe.v1.1.chr11g28180.1
Nbe.v1.s00170g28180
Nbe.v1.1.chr11:49079517-49082681
-
Niben101Scf07466g02010.1
RAP
RAP
Nbe.v1.1.chr11g31720
Nbe.v1.1.chr11g31720.1
Nbe.v1.s00170g31720
Nbe.v1.1.chr11:36088159-36091323
-
Niben101Scf07466g02010.1
RAP
RAP
Nbe.v1.1.chr16g26610
Nbe.v1.1.chr16g26610.1
Nbe.v1.s00180g26610
Nbe.v1.1.chr16:165224513-165226126
-
Niben101Scf03634g09019.1
No description
Nbe.v1.1.chr15g04640
Nbe.v1.1.chr15g04640.1
Nbe.v1.s00190g04640
Nbe.v1.1.chr15:163524807-163531370
+
Niben101Scf02050g01003.1
S-domain-2 5
S-domain-2 5
Nbe.v1.1.chr15g13050
Nbe.v1.1.chr15g13050.1
Nbe.v1.s00190g13050
Nbe.v1.1.chr15:134917218-134919011
-
heteroglycan glucosidase 1
heteroglycan glucosidase 1
Nbe.v1.1.chr15g16060
Nbe.v1.1.chr15g16060.1
Nbe.v1.s00190g16060
Nbe.v1.1.chr15:125991599-125993178
+
aspartate/glutamate/uridylate kinase family protein
aspartate/glutamate/uridylate kinase family protein
Nbe.v1.1.chr15g37540
Nbe.v1.1.chr15g37540.1
Nbe.v1.s00210g05190
Nbe.v1.1.chr15:49636485-49645586
-
Niben101Scf00457g02012.1
transducin family protein / WD-40 repeat family protein
transducin family protein / WD-40 repeat family protein