N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 60

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00270
Nbe.v1.1.chr17g00270.1
Nbe.v1.s00010g00270
Nbe.v1.1.chr17:183766823-183768038
-
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr17g00510
Nbe.v1.1.chr17g00510.1
Nbe.v1.s00010g00510
Nbe.v1.1.chr17:183434396-183435698
-
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr17g03110
Nbe.v1.1.chr17g03110.1
Nbe.v1.s00010g03110
Nbe.v1.1.chr17:177309710-177310502
-
Plant thionin family protein
Plant thionin family protein
Nbe.v1.1.chr17g10270
Nbe.v1.1.chr17g10270.1
Nbe.v1.s00010g10270
Nbe.v1.1.chr17:157334797-157341522
+
molybdopterin biosynthesis MoaE family protein
molybdopterin biosynthesis MoaE family protein
Nbe.v1.1.chr17g11750
Nbe.v1.1.chr17g11750.1
Nbe.v1.s00010g11750
Nbe.v1.1.chr17:151620538-151621035
-
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr17g11870
Nbe.v1.1.chr17g11870.1
Nbe.v1.s00010g11870
Nbe.v1.1.chr17:151185987-151186908
-
WEB family protein (DUF827)
NULL
Nbe.v1.1.chr17g33180
Nbe.v1.1.chr17g33180.1
Nbe.v1.s00010g33180
Nbe.v1.1.chr17:72151692-72165520
+
Niben101Scf02523g00008.1
Cysteine proteinases superfamily protein
Cysteine proteinases superfamily protein
Nbe.v1.1.chr17g33640
Nbe.v1.1.chr17g33640.1
Nbe.v1.s00010g33640
Nbe.v1.1.chr17:70141864-70143253
-
WEB family protein (DUF827)
Plant protein of unknown function (DUF827)
Nbe.v1.1.chr17g52980
Nbe.v1.1.chr17g52980.1
Nbe.v1.s00010g52980
Nbe.v1.1.chr17:4457909-4458418
-
nitrite reductase 1
nitrite reductase 1
Nbe.v1.1.chr06g04550
Nbe.v1.1.chr06g04550.1
Nbe.v1.s00020g04550
Nbe.v1.1.chr06:137959816-137960729
+
WEB family protein (DUF827)
NULL
Nbe.v1.1.chr05g09400
Nbe.v1.1.chr05g09400.1
Nbe.v1.s00030g09400
Nbe.v1.1.chr05:32378983-32382419
-
Copia-like polyprotein/retrotransposon
NULL
Nbe.v1.1.chr05g33370
Nbe.v1.1.chr05g33370.1
Nbe.v1.s00030g33370
Nbe.v1.1.chr05:121160239-121165382
-
Niben101Scf04872g00002.1
calcium-dependent protein kinase 21
NULL
Nbe.v1.1.chr05g38770
Nbe.v1.1.chr05g38770.1
Nbe.v1.s00030g38770
Nbe.v1.1.chr05:145707822-145736218
+
Niben101Scf02803g00009.1
Armadillo/beta-catenin repeat family protein / kinesin motor family protein
NULL
Nbe.v1.1.chr09g00280
Nbe.v1.1.chr09g00280.1
Nbe.v1.s00040g00280
Nbe.v1.1.chr09:145110120-145111491
+
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr09g26290
Nbe.v1.1.chr09g26290.1
Nbe.v1.s00040g26290
Nbe.v1.1.chr09:60547029-60547322
-
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr09g36110
Nbe.v1.1.chr09g36110.1
Nbe.v1.s00040g36110
Nbe.v1.1.chr09:26171899-26172698
-
HSP40/DnaJ peptide-binding protein
HSP40/DnaJ peptide-binding protein
Nbe.v1.1.chr10g00850
Nbe.v1.1.chr10g00850.1
Nbe.v1.s00050g00850
Nbe.v1.1.chr10:2210323-2216107
-
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr10g08790
Nbe.v1.1.chr10g08790.1
Nbe.v1.s00050g08790
Nbe.v1.1.chr10:27746544-27747297
+
HSP40/DnaJ peptide-binding protein
HSP40/DnaJ peptide-binding protein
Nbe.v1.1.chr10g11910
Nbe.v1.1.chr10g11910.1
Nbe.v1.s00050g11910
Nbe.v1.1.chr10:39784790-39785699
-
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr10g29870
Nbe.v1.1.chr10g29870.1
Nbe.v1.s00050g29870
Nbe.v1.1.chr10:100402248-100408293
-
SPA1-related 3
NULL
Nbe.v1.1.chr10g34340
Nbe.v1.1.chr10g34340.1
Nbe.v1.s00050g34340
Nbe.v1.1.chr10:117759583-117760289
+
related to vernalization1 1
NULL
Nbe.v1.1.chr19g06460
Nbe.v1.1.chr19g06460.1
Nbe.v1.s00060g06460
Nbe.v1.1.chr19:119225003-119232185
+
Niben101Scf06542g00001.1
HXXXD-type acyl-transferase family protein
HXXXD-type acyl-transferase family protein
Nbe.v1.1.chr19g07850
Nbe.v1.1.chr19g07850.1
Nbe.v1.s00060g07850
Nbe.v1.1.chr19:114374270-114376772
-
cell division cycle protein 48-related / CDC48-like protein
cell division cycle protein 48-related / CDC48-related
Nbe.v1.1.chr19g36770
Nbe.v1.1.chr19g36770.1
Nbe.v1.s00060g36770
Nbe.v1.1.chr19:23038831-23045551
+
pentatricopeptide (PPR) repeat-containing protein
pentatricopeptide (PPR) repeat-containing protein
Nbe.v1.1.chr19g40330
Nbe.v1.1.chr19g40330.1
Nbe.v1.s00060g40330
Nbe.v1.1.chr19:14310551-14323922
-
Niben101Scf04339g08009.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr19g40360
Nbe.v1.1.chr19g40360.1
Nbe.v1.s00060g40360
Nbe.v1.1.chr19:14269769-14283180
-
Niben101Scf04339g08009.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr12g07100
Nbe.v1.1.chr12g07100.1
Nbe.v1.s00070g07100
Nbe.v1.1.chr12:117672508-117682907
+
proteinase inhibitor I4%2C serpin (DUF716)
Family of unknown function (DUF716)
Nbe.v1.1.chr12g19250
Nbe.v1.1.chr12g19250.1
Nbe.v1.s00070g19250
Nbe.v1.1.chr12:74874455-74874928
-
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g39630
Nbe.v1.1.chr12g39630.1
Nbe.v1.s00070g39630
Nbe.v1.1.chr12:13658939-13660214
+
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr12g39780
Nbe.v1.1.chr12g39780.1
Nbe.v1.s00070g39780
Nbe.v1.1.chr12:13212099-13213013
-
elongation factor family protein
elongation factor family protein
Nbe.v1.1.chr12g42760
Nbe.v1.1.chr12g42760.1
Nbe.v1.s00070g42760
Nbe.v1.1.chr12:4531330-4532634
+
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr08g14540
Nbe.v1.1.chr08g14540.1
Nbe.v1.s00080g14540
Nbe.v1.1.chr08:51168408-51179367
+
Niben101Scf08157g02012.1
cyclic nucleotide-gated cation channel 4
NULL
Nbe.v1.1.chr08g17290
Nbe.v1.1.chr08g17290.1
Nbe.v1.s00080g17290
Nbe.v1.1.chr08:60840622-60850834
+
TRAF-like superfamily protein
TRAF-like superfamily protein
Nbe.v1.1.chr08g31060
Nbe.v1.1.chr08g31060.1
Nbe.v1.s00080g31060
Nbe.v1.1.chr08:112169701-112176192
+
related to vernalization1 1
NULL
Nbe.v1.1.chr08g34890
Nbe.v1.1.chr08g34890.1
Nbe.v1.s00080g34890
Nbe.v1.1.chr08:126526479-126554514
+
Niben101Scf06698g00008.1
phosphofructokinase 3
phosphofructokinase 3
Nbe.v1.1.chr02g04020
Nbe.v1.1.chr02g04020.1
Nbe.v1.s00090g04020
Nbe.v1.1.chr02:134863884-134872991
+
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr02g27390
Nbe.v1.1.chr02g27390.1
Nbe.v1.s00090g27390
Nbe.v1.1.chr02:73971445-73971669
-
HSP40/DnaJ peptide-binding protein
HSP40/DnaJ peptide-binding protein
Nbe.v1.1.chr02g34650
Nbe.v1.1.chr02g34650.1
Nbe.v1.s00090g34650
Nbe.v1.1.chr02:42899148-42899450
-
calcium-dependent protein kinase 21
NULL
Nbe.v1.1.chr02g43260
Nbe.v1.1.chr02g43260.1
Nbe.v1.s00090g43260
Nbe.v1.1.chr02:5542326-5543636
-
Di-glucose binding protein with Kinesin motor domain-containing protein
NULL
Nbe.v1.1.chr02g43860
Nbe.v1.1.chr02g43860.1
Nbe.v1.s00090g43860
Nbe.v1.1.chr02:3622215-3622670
-
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr02g43990
Nbe.v1.1.chr02g43990.1
Nbe.v1.s00090g43990
Nbe.v1.1.chr02:3141084-3141482
-
calcium-dependent protein kinase 21
NULL
Nbe.v1.1.chr18g28300
Nbe.v1.1.chr18g28300.1
Nbe.v1.s00110g28300
Nbe.v1.1.chr18:45156103-45156453
+
ankyrin repeat family protein
ankyrin repeat family protein
Nbe.v1.1.chr04g06340
Nbe.v1.1.chr04g06340.1
Nbe.v1.s00130g06340
Nbe.v1.1.chr04:102999277-103000185
+
LONGIFOLIA protein
NULL
Nbe.v1.1.chr04g20650
Nbe.v1.1.chr04g20650.1
Nbe.v1.s00130g20650
Nbe.v1.1.chr04:45806470-45807655
+
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr04g31700
Nbe.v1.1.chr04g31700.1
Nbe.v1.s00130g31700
Nbe.v1.1.chr04:9327411-9334942
-
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr14g27450
Nbe.v1.1.chr14g27450.1
Nbe.v1.s00140g27450
Nbe.v1.1.chr14:45026468-45032589
+
nitrite reductase 1
nitrite reductase 1
Nbe.v1.1.chr03g11830
Nbe.v1.1.chr03g11830.1
Nbe.v1.s00150g11830
Nbe.v1.1.chr03:40624099-40625008
-
elongation factor family protein
elongation factor family protein
Nbe.v1.1.chr03g15720
Nbe.v1.1.chr03g15720.1
Nbe.v1.s00150g15720
Nbe.v1.1.chr03:57382220-57384078
-
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr03g33140
Nbe.v1.1.chr03g33140.1
Nbe.v1.s00150g33140
Nbe.v1.1.chr03:108567476-108568865
+
Sec23/Sec24 protein transport family protein
Sec23/Sec24 protein transport family protein
Nbe.v1.1.chr11g11080
Nbe.v1.1.chr11g11080.1
Nbe.v1.s00170g11080
Nbe.v1.1.chr11:99738630-99744877
+
Niben101Scf16244g01002.1
phospholipase D alpha 1
phospholipase D alpha 1
Nbe.v1.1.chr11g25160
Nbe.v1.1.chr11g25160.1
Nbe.v1.s00170g25160
Nbe.v1.1.chr11:59690466-59690810
+
related to vernalization1 1
NULL
Nbe.v1.1.chr16g03930
Nbe.v1.1.chr16g03930.1
Nbe.v1.s00180g03930
Nbe.v1.1.chr16:81724362-81726000
+
Tetratricopeptide repeat (TPR)-like superfamily protein
NULL
Nbe.v1.1.chr15g28850
Nbe.v1.1.chr15g28850.1
Nbe.v1.s00190g28850
Nbe.v1.1.chr15:76176823-76177732
+
elongation factor family protein
elongation factor family protein
Nbe.v1.1.chr16g34460
Nbe.v1.1.chr16g34460.1
Nbe.v1.s00200g03050
Nbe.v1.1.chr16:7441131-7449187
+
Niben101Scf12382g00011.1
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr16g35280
Nbe.v1.1.chr16g35280.1
Nbe.v1.s00200g03870
Nbe.v1.1.chr16:9719830-9728930
+
Niben101Scf00298g02021.1
Small nuclear ribonucleoprotein family protein
Small nuclear ribonucleoprotein family protein
Nbe.v1.1.chr16g40610
Nbe.v1.1.chr16g40610.1
Nbe.v1.s00200g09200
Nbe.v1.1.chr16:24290185-24291094
-
nitrite reductase 1
nitrite reductase 1
Nbe.v1.1.chr16g49340
Nbe.v1.1.chr16g49340.1
Nbe.v1.s00200g17930
Nbe.v1.1.chr16:54693999-54694797
+
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Nbe.v1.1.chr15g45690
Nbe.v1.1.chr15g45690.1
Nbe.v1.s00210g13340
Nbe.v1.1.chr15:17227416-17234675
-
Niben101Scf14562g00007.1
elongation factor family protein
elongation factor family protein
Nbe.v1.1.chr15g46560
Nbe.v1.1.chr15g46560.1
Nbe.v1.s00210g14210
Nbe.v1.1.chr15:13705049-13705964
-
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr15g47620
Nbe.v1.1.chr15g47620.1
Nbe.v1.s00210g15270
Nbe.v1.1.chr15:10392047-10392836
+
nitrite reductase 1
nitrite reductase 1