N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 33

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g02140
Nbe.v1.1.chr17g02140.1
Nbe.v1.s00010g02140
Nbe.v1.1.chr17:179729449-179729898
-
Mitochondrial ATP synthase D chain-related protein
NULL
Nbe.v1.1.chr17g23790
Nbe.v1.1.chr17g23790.1
Nbe.v1.s00010g23790
Nbe.v1.1.chr17:104860176-104873104
+
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr06g07040
Nbe.v1.1.chr06g07040.1
Nbe.v1.s00020g07040
Nbe.v1.1.chr06:130562483-130565557
-
Niben101Scf03075g00001.1
hypothetical protein
NULL
Nbe.v1.1.chr06g18170
Nbe.v1.1.chr06g18170.1
Nbe.v1.s00020g18170
Nbe.v1.1.chr06:88974445-88980577
-
COP1-interactive protein 1
NULL
Nbe.v1.1.chr06g22500
Nbe.v1.1.chr06g22500.1
Nbe.v1.s00020g22500
Nbe.v1.1.chr06:72854173-72855913
+
AGAMOUS-like 67
NULL
Nbe.v1.1.chr06g32630
Nbe.v1.1.chr06g32630.1
Nbe.v1.s00020g32630
Nbe.v1.1.chr06:35455651-35456052
+
P-glycoprotein 14
P-glycoprotein 14
Nbe.v1.1.chr05g25050
Nbe.v1.1.chr05g25050.1
Nbe.v1.s00030g25050
Nbe.v1.1.chr05:87245468-87245674
-
Leucine-rich repeat protein kinase family protein
NULL
Nbe.v1.1.chr05g27820
Nbe.v1.1.chr05g27820.1
Nbe.v1.s00030g27820
Nbe.v1.1.chr05:98169111-98175091
+
Plant invertase/pectin methylesterase inhibitor superfamily
Plant invertase/pectin methylesterase inhibitor superfamily
Nbe.v1.1.chr05g35480
Nbe.v1.1.chr05g35480.1
Nbe.v1.s00030g35480
Nbe.v1.1.chr05:128540556-128543818
-
holocarboxylase synthetase 2
NULL
Nbe.v1.1.chr05g38170
Nbe.v1.1.chr05g38170.1
Nbe.v1.s00030g38170
Nbe.v1.1.chr05:142444862-142445188
-
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Protein of unknown function (DUF579)
Nbe.v1.1.chr19g29020
Nbe.v1.1.chr19g29020.1
Nbe.v1.s00060g29020
Nbe.v1.1.chr19:41931174-41931491
-
Calcium-dependent lipid-binding (CaLB domain) family protein
Calcium-dependent lipid-binding (CaLB domain) family protein
Nbe.v1.1.chr19g45720
Nbe.v1.1.chr19g45720.1
Nbe.v1.s00060g45720
Nbe.v1.1.chr19:317941-323525
+
Flavin-binding monooxygenase family protein
Flavin-binding monooxygenase family protein
Nbe.v1.1.chr12g44240
Nbe.v1.1.chr12g44240.1
Nbe.v1.s00070g44240
Nbe.v1.1.chr12:1365242-1365598
-
APRATAXIN-like protein
APRATAXIN-like
Nbe.v1.1.chr08g26230
Nbe.v1.1.chr08g26230.1
Nbe.v1.s00080g26230
Nbe.v1.1.chr08:94326454-94326702
+
aluminum induced protein with YGL and LRDR motifs
Aluminium induced protein with YGL and LRDR motifs
Nbe.v1.1.chr08g26520
Nbe.v1.1.chr08g26520.1
Nbe.v1.s00080g26520
Nbe.v1.1.chr08:95591587-95609475
+
Niben101Scf00577g08003.1
Major facilitator superfamily protein
Major facilitator superfamily protein
Nbe.v1.1.chr08g32260
Nbe.v1.1.chr08g32260.1
Nbe.v1.s00080g32260
Nbe.v1.1.chr08:116931542-116937006
+
Niben101Scf03978g02001.1
peptidase M1 family protein
peptidase M1 family protein
Nbe.v1.1.chr08g32970
Nbe.v1.1.chr08g32970.1
Nbe.v1.s00080g32970
Nbe.v1.1.chr08:119476076-119479536
+
Niben101Scf03939g05009.1
SufE/NifU family protein
SufE/NifU family protein
Nbe.v1.1.chr02g07420
Nbe.v1.1.chr02g07420.1
Nbe.v1.s00090g07420
Nbe.v1.1.chr02:127108985-127112173
+
envelope glycoprotein B
NULL
Nbe.v1.1.chr02g35750
Nbe.v1.1.chr02g35750.1
Nbe.v1.s00090g35750
Nbe.v1.1.chr02:36662339-36662728
-
NAC domain protein
NAC domain containing protein 77
Nbe.v1.1.chr02g36070
Nbe.v1.1.chr02g36070.1
Nbe.v1.s00090g36070
Nbe.v1.1.chr02:35950774-35951100
+
ERD (early-responsive to dehydration stress) family protein
ERD (early-responsive to dehydration stress) family protein
Nbe.v1.1.chr07g02400
Nbe.v1.1.chr07g02400.1
Nbe.v1.s00100g02400
Nbe.v1.1.chr07:136302857-136304714
+
Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
Nbe.v1.1.chr18g00470
Nbe.v1.1.chr18g00470.1
Nbe.v1.s00110g00470
Nbe.v1.1.chr18:139898752-139898994
+
eukaryotic translation initiation factor 4G
eukaryotic translation initiation factor 4G
Nbe.v1.1.chr18g11790
Nbe.v1.1.chr18g11790.1
Nbe.v1.s00110g11790
Nbe.v1.1.chr18:102733624-102734028
+
YCF54
NULL
Nbe.v1.1.chr13g03780
Nbe.v1.1.chr13g03780.1
Nbe.v1.s00120g03780
Nbe.v1.1.chr13:11990488-11990889
+
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr04g32330
Nbe.v1.1.chr04g32330.1
Nbe.v1.s00130g32330
Nbe.v1.1.chr04:7572400-7572789
+
Protein prenylyltransferase superfamily protein
Protein prenylyltransferase superfamily protein
Nbe.v1.1.chr01g40120
Nbe.v1.1.chr01g40120.1
Nbe.v1.s00160g40120
Nbe.v1.1.chr01:12859792-12860043
+
RELA/SPOT homolog 1
RELA/SPOT homolog 1
Nbe.v1.1.chr01g40160
Nbe.v1.1.chr01g40160.1
Nbe.v1.s00160g40160
Nbe.v1.1.chr01:12810656-12810907
+
RELA/SPOT homolog 1
RELA/SPOT homolog 1
Nbe.v1.1.chr16g15650
Nbe.v1.1.chr16g15650.1
Nbe.v1.s00180g15650
Nbe.v1.1.chr16:127410330-127411985
-
glucan synthase-like 12
glucan synthase-like 12
Nbe.v1.1.chr15g10330
Nbe.v1.1.chr15g10330.1
Nbe.v1.s00190g10330
Nbe.v1.1.chr15:142753018-142753224
+
heavy metal atpase 4
NULL
Nbe.v1.1.chr15g13850
Nbe.v1.1.chr15g13850.1
Nbe.v1.s00190g13850
Nbe.v1.1.chr15:132508854-132509105
-
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr15g20850
Nbe.v1.1.chr15g20850.1
Nbe.v1.s00190g20850
Nbe.v1.1.chr15:107602289-107602690
+
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr15g23800
Nbe.v1.1.chr15g23800.1
Nbe.v1.s00190g23800
Nbe.v1.1.chr15:95498319-95498717
+
casein lytic proteinase B4
casein lytic proteinase B4
Nbe.v1.1.chr15g44720
Nbe.v1.1.chr15g44720.1
Nbe.v1.s00210g12370
Nbe.v1.1.chr15:20089646-20090041
+
P-glycoprotein 9
NULL