N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 8

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
33337	Nbe.v1.1.chr17g28430	Nbe.v1.1.chr17g28430.1	Nbe.v1.s00010g28430	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr17:89130004-89133395	+	Niben101Scf04406g04023.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
80729	Nbe.v1.1.chr10g09560	Nbe.v1.1.chr10g09560.1	Nbe.v1.s00050g09560	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:30418142-30420265	-	Niben101Scf01957g00005.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
10604	Nbe.v1.1.chr12g24420	Nbe.v1.1.chr12g24420.1	Nbe.v1.s00070g24420	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr12:59230744-59234605	-	Niben101Scf05034g02001.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
46262	Nbe.v1.1.chr07g16540	Nbe.v1.1.chr07g16540.1	Nbe.v1.s00100g16540	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr07:75082028-75085267	-	Niben101Scf04406g04023.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
49202	Nbe.v1.1.chr13g08620	Nbe.v1.1.chr13g08620.1	Nbe.v1.s00120g08620	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr13:27861540-27867051	-	Niben101Scf10448g01003.1	AT4G18030.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
50309	Nbe.v1.1.chr13g19670	Nbe.v1.1.chr13g19670.1	Nbe.v1.s00120g19670	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr13:62141232-62143795	-	Niben101Scf04096g12002.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
38288	Nbe.v1.1.chr03g23780	Nbe.v1.1.chr03g23780.1	Nbe.v1.s00150g23780	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr03:85630818-85633998	+	Niben101Scf27001g00003.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
29620	Nbe.v1.1.chr01g37410	Nbe.v1.1.chr01g37410.1	Nbe.v1.s00160g37410	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr01:19591761-19597400	-	Niben101Scf03159g00001.1	AT4G00750.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries