N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 34

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g07820
Nbe.v1.1.chr17g07820.1
Nbe.v1.s00010g07820
Nbe.v1.1.chr17:164397345-164403882
+
Niben101Scf05047g04009.1
Phosphofructokinase family protein
Phosphofructokinase family protein
Nbe.v1.1.chr17g25120
Nbe.v1.1.chr17g25120.1
Nbe.v1.s00010g25120
Nbe.v1.1.chr17:100336083-100338260
-
Niben101Scf02714g06021.1
Nucleoporin autopeptidase
NULL
Nbe.v1.1.chr17g27960
Nbe.v1.1.chr17g27960.1
Nbe.v1.s00010g27960
Nbe.v1.1.chr17:90584944-90586426
-
Niben101Scf04619g00001.1
F-box/RNI-like superfamily protein
NULL
Nbe.v1.1.chr17g42780
Nbe.v1.1.chr17g42780.1
Nbe.v1.s00010g42780
Nbe.v1.1.chr17:34484112-34485179
-
Niben101Scf01620g02009.1
Ran BP2/NZF zinc finger-like superfamily protein
NULL
Nbe.v1.1.chr06g03480
Nbe.v1.1.chr06g03480.1
Nbe.v1.s00020g03480
Nbe.v1.1.chr06:141719739-141730553
-
Niben101Scf09310g02003.1
protein kinase family protein / protein phosphatase 2C ( PP2C) family protein
NULL
Nbe.v1.1.chr06g38550
Nbe.v1.1.chr06g38550.1
Nbe.v1.s00020g38550
Nbe.v1.1.chr06:11712535-11718571
-
Niben101Scf01346g01006.1
diacylglycerol kinase1
NULL
Nbe.v1.1.chr05g01670
Nbe.v1.1.chr05g01670.1
Nbe.v1.s00030g01670
Nbe.v1.1.chr05:5935081-5946020
-
Niben101Scf01970g01011.1
magnesium transporter%2C putative (DUF803)
Protein of unknown function (DUF803)
Nbe.v1.1.chr05g06400
Nbe.v1.1.chr05g06400.1
Nbe.v1.s00030g06400
Nbe.v1.1.chr05:23409916-23417809
+
Niben101Scf06397g03002.1
RING/U-box superfamily protein
NULL
Nbe.v1.1.chr05g33470
Nbe.v1.1.chr05g33470.1
Nbe.v1.s00030g33470
Nbe.v1.1.chr05:121596986-121626517
+
Niben101Scf01795g19019.1
phosphatidylinositol 4-OH kinase beta1
phosphatidylinositol 4-OH kinase beta1
Nbe.v1.1.chr09g14970
Nbe.v1.1.chr09g14970.1
Nbe.v1.s00040g14970
Nbe.v1.1.chr09:97371885-97372406
+
Niben101Scf01911g00001.1
FASCICLIN-like arabinogalactan-protein 11
FASCICLIN-like arabinogalactan-protein 11
Nbe.v1.1.chr09g37950
Nbe.v1.1.chr09g37950.1
Nbe.v1.s00040g37950
Nbe.v1.1.chr09:19781621-19782990
+
Niben101Scf04528g09007.1
diacylglycerol kinase 5
diacylglycerol kinase 5
Nbe.v1.1.chr09g41560
Nbe.v1.1.chr09g41560.1
Nbe.v1.s00040g41560
Nbe.v1.1.chr09:668511-671627
+
Niben101Scf03652g01004.1
nonsense-mediated mRNA decay NMD3 family protein
nonsense-mediated mRNA decay NMD3 family protein
Nbe.v1.1.chr10g00010
Nbe.v1.1.chr10g00010.1
Nbe.v1.s00050g00010
Nbe.v1.1.chr10:194963-210802
-
Niben101Scf19517g00019.1
diacylglycerol kinase 7
diacylglycerol kinase 7
Nbe.v1.1.chr10g15900
Nbe.v1.1.chr10g15900.1
Nbe.v1.s00050g15900
Nbe.v1.1.chr10:55737591-55745183
+
Niben101Scf04375g13006.1
diacylglycerol kinase 2
diacylglycerol kinase 2
Nbe.v1.1.chr19g06330
Nbe.v1.1.chr19g06330.1
Nbe.v1.s00060g06330
Nbe.v1.1.chr19:119700244-119707429
-
Niben101Scf01346g01006.1
diacylglycerol kinase1
NULL
Nbe.v1.1.chr19g12080
Nbe.v1.1.chr19g12080.1
Nbe.v1.s00060g12080
Nbe.v1.1.chr19:95993105-96001166
-
Niben101Scf01970g01011.1
magnesium transporter%2C putative (DUF803)
Protein of unknown function (DUF803)
Nbe.v1.1.chr19g30500
Nbe.v1.1.chr19g30500.1
Nbe.v1.s00060g30500
Nbe.v1.1.chr19:38749691-38756285
-
Niben101Scf01448g02005.1
proline-rich receptor-like kinase%2C putative (DUF1421)
Protein of unknown function (DUF1421)
Nbe.v1.1.chr19g35550
Nbe.v1.1.chr19g35550.1
Nbe.v1.s00060g35550
Nbe.v1.1.chr19:26240626-26248843
+
Niben101Scf08446g03001.1
glucan synthase-like 1
glucan synthase-like 1
Nbe.v1.1.chr19g40020
Nbe.v1.1.chr19g40020.1
Nbe.v1.s00060g40020
Nbe.v1.1.chr19:15068315-15086185
+
Niben101Scf01785g10006.1
tobamovirus multiplication protein
NULL
Nbe.v1.1.chr08g10100
Nbe.v1.1.chr08g10100.1
Nbe.v1.s00080g10100
Nbe.v1.1.chr08:35682957-35695053
+
Niben101Scf01409g10007.1
diacylglycerol kinase 7
diacylglycerol kinase 7
Nbe.v1.1.chr02g12140
Nbe.v1.1.chr02g12140.1
Nbe.v1.s00090g12140
Nbe.v1.1.chr02:116946431-116961948
+
Niben101Scf01785g10006.1
tobamovirus multiplication protein
NULL
Nbe.v1.1.chr02g31690
Nbe.v1.1.chr02g31690.1
Nbe.v1.s00090g31690
Nbe.v1.1.chr02:58175887-58176779
-
Niben101Scf00709g04011.1
glycosyltransferase-like protein
NULL
Nbe.v1.1.chr07g29020
Nbe.v1.1.chr07g29020.1
Nbe.v1.s00100g29020
Nbe.v1.1.chr07:30037213-30037670
+
Niben101Scf04905g01005.1
casein kinase I-like 8
casein kinase I-like 8
Nbe.v1.1.chr18g15240
Nbe.v1.1.chr18g15240.1
Nbe.v1.s00110g15240
Nbe.v1.1.chr18:91390646-91391059
-
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Nbe.v1.1.chr18g28160
Nbe.v1.1.chr18g28160.1
Nbe.v1.s00110g28160
Nbe.v1.1.chr18:45772497-45777634
+
Niben101Scf03797g00003.1
Duplicated homeodomain-like superfamily protein
Duplicated homeodomain-like superfamily protein
Nbe.v1.1.chr13g00590
Nbe.v1.1.chr13g00590.1
Nbe.v1.s00120g00590
Nbe.v1.1.chr13:1555880-1569922
-
Niben101Scf01409g10007.1
diacylglycerol kinase 7
diacylglycerol kinase 7
Nbe.v1.1.chr13g06980
Nbe.v1.1.chr13g06980.1
Nbe.v1.s00120g06980
Nbe.v1.1.chr13:23896188-23901066
-
Niben101Scf05395g02001.1
mitotic-like cyclin 3B from Arabidopsi
mitotic-like cyclin 3B from Arabidopsis
Nbe.v1.1.chr13g12440
Nbe.v1.1.chr13g12440.1
Nbe.v1.s00120g12440
Nbe.v1.1.chr13:36658220-36662998
+
Niben101Scf08721g01029.1
diacylglycerol kinase1
NULL
Nbe.v1.1.chr14g16880
Nbe.v1.1.chr14g16880.1
Nbe.v1.s00140g16880
Nbe.v1.1.chr14:76175463-76178370
-
Niben101Scf00326g01011.1
RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-binding (RRM/RBD/RNP motifs) family protein
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g35800
Nbe.v1.1.chr03g35800.1
Nbe.v1.s00150g35800
Nbe.v1.1.chr03:114224497-114228756
+
Niben101Scf11806g00006.1
diacylglycerol kinase1
NULL
Nbe.v1.1.chr01g35210
Nbe.v1.1.chr01g35210.1
Nbe.v1.s00160g35210
Nbe.v1.1.chr01:24627555-24632877
-
Niben101Scf06950g00004.1
Diacylglycerol kinase family protein
Diacylglycerol kinase family protein
Nbe.v1.1.chr11g14570
Nbe.v1.1.chr11g14570.1
Nbe.v1.s00170g14570
Nbe.v1.1.chr11:91480250-91485127
-
Niben101Scf01718g09029.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr16g39660
Nbe.v1.1.chr16g39660.1
Nbe.v1.s00200g08250
Nbe.v1.1.chr16:21816764-21820147
+
Niben101Scf09101g00001.1
Calcineurin-like metallo-phosphoesterase superfamily protein
Calcineurin-like metallo-phosphoesterase superfamily protein