N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 40

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g09590
Nbe.v1.1.chr06g09590.1
Nbe.v1.s00020g09590
Nbe.v1.1.chr06:121233611-121236934
-
No description
Nbe.v1.1.chr06g28080
Nbe.v1.1.chr06g28080.1
Nbe.v1.s00020g28080
Nbe.v1.1.chr06:53698792-53701471
+
Niben101Scf02348g06005.1
Cellulose-synthase-like C12
NULL
Nbe.v1.1.chr05g01800
Nbe.v1.1.chr05g01800.1
Nbe.v1.s00030g01800
Nbe.v1.1.chr05:6329821-6331102
-
No description
Nbe.v1.1.chr09g24250
Nbe.v1.1.chr09g24250.1
Nbe.v1.s00040g24250
Nbe.v1.1.chr09:67067660-67069456
+
Niben101Scf00870g08002.1
exocyst subunit exo70 family protein D1
exocyst subunit exo70 family protein D1
Nbe.v1.1.chr19g01780
Nbe.v1.1.chr19g01780.1
Nbe.v1.s00060g01780
Nbe.v1.1.chr19:137288710-137289859
-
zinc knuckle (CCHC-type) family protein
zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr19g21600
Nbe.v1.1.chr19g21600.1
Nbe.v1.s00060g21600
Nbe.v1.1.chr19:64588349-64588840
-
Niben101Scf07321g00016.1
casein kinase I-like 8
casein kinase I-like 8
Nbe.v1.1.chr12g26780
Nbe.v1.1.chr12g26780.1
Nbe.v1.s00070g26780
Nbe.v1.1.chr12:51502772-51503183
-
Niben101Ctg15819g00003.1
myb-like transcription factor family protein
myb-like transcription factor family protein
Nbe.v1.1.chr12g31600
Nbe.v1.1.chr12g31600.1
Nbe.v1.s00070g31600
Nbe.v1.1.chr12:39399871-39400946
-
MuDR family transposase
NULL
Nbe.v1.1.chr08g00170
Nbe.v1.1.chr08g00170.1
Nbe.v1.s00080g00170
Nbe.v1.1.chr08:572291-573843
-
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NULL
Nbe.v1.1.chr08g09700
Nbe.v1.1.chr08g09700.1
Nbe.v1.s00080g09700
Nbe.v1.1.chr08:34474906-34476083
-
Niben101Scf12361g03010.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr08g37060
Nbe.v1.1.chr08g37060.1
Nbe.v1.s00080g37060
Nbe.v1.1.chr08:133832517-133840819
+
Niben101Scf02348g06005.1
Cellulose-synthase-like C12
NULL
Nbe.v1.1.chr08g39510
Nbe.v1.1.chr08g39510.1
Nbe.v1.s00080g39510
Nbe.v1.1.chr08:141933643-141934431
-
Niben101Scf01837g03007.1
Ribose 5-phosphate isomerase%2C type A protein
Ribose 5-phosphate isomerase, type A protein
Nbe.v1.1.chr02g02510
Nbe.v1.1.chr02g02510.1
Nbe.v1.s00090g02510
Nbe.v1.1.chr02:137751204-137753548
+
Niben101Scf15579g00003.1
DNAse I-like superfamily protein
NULL
Nbe.v1.1.chr02g06260
Nbe.v1.1.chr02g06260.1
Nbe.v1.s00090g06260
Nbe.v1.1.chr02:129531545-129532719
+
Niben101Scf13394g00021.1
F-box family protein
F-box family protein
Nbe.v1.1.chr07g13020
Nbe.v1.1.chr07g13020.1
Nbe.v1.s00100g13020
Nbe.v1.1.chr07:86293318-86295027
-
Niben101Scf02510g05028.1
MuDR family transposase
NULL
Nbe.v1.1.chr07g28940
Nbe.v1.1.chr07g28940.1
Nbe.v1.s00100g28940
Nbe.v1.1.chr07:30390296-30391438
-
Niben101Scf20961g00015.1
MuDR family transposase
NULL
Nbe.v1.1.chr07g30280
Nbe.v1.1.chr07g30280.1
Nbe.v1.s00100g30280
Nbe.v1.1.chr07:24855543-24856175
-
DNA repair ATPase-like protein
DNA repair ATPase-related
Nbe.v1.1.chr18g01630
Nbe.v1.1.chr18g01630.1
Nbe.v1.s00110g01630
Nbe.v1.1.chr18:136708694-136711891
-
Niben101Scf14312g00006.1
RNA helicase family protein
NULL
Nbe.v1.1.chr18g23280
Nbe.v1.1.chr18g23280.1
Nbe.v1.s00110g23280
Nbe.v1.1.chr18:62517090-62517982
-
Niben101Scf08263g01001.1
Ribosomal RNA processing Brix domain protein
Ribosomal RNA processing Brix domain protein
Nbe.v1.1.chr18g39860
Nbe.v1.1.chr18g39860.1
Nbe.v1.s00110g39860
Nbe.v1.1.chr18:6165017-6165688
-
Disease resistance protein (TIR-NBS-LRR class) family
NULL
Nbe.v1.1.chr13g26660
Nbe.v1.1.chr13g26660.1
Nbe.v1.s00120g26660
Nbe.v1.1.chr13:80103478-80119170
+
Niben101Scf06825g02001.1
Cytochrome P450 superfamily protein
Cytochrome P450 superfamily protein
Nbe.v1.1.chr04g02530
Nbe.v1.1.chr04g02530.1
Nbe.v1.s00130g02530
Nbe.v1.1.chr04:123777725-123778773
-
fasciclin-like arabinogalactan protein
NULL
Nbe.v1.1.chr04g14920
Nbe.v1.1.chr04g14920.1
Nbe.v1.s00130g14920
Nbe.v1.1.chr04:66512775-66513960
+
MuDR family transposase
NULL
Nbe.v1.1.chr03g05750
Nbe.v1.1.chr03g05750.1
Nbe.v1.s00150g05750
Nbe.v1.1.chr03:19254130-19256577
+
Niben101Scf08263g01001.1
MuDR family transposase
NULL
Nbe.v1.1.chr03g08190
Nbe.v1.1.chr03g08190.1
Nbe.v1.s00150g08190
Nbe.v1.1.chr03:27718090-27718921
+
Niben101Scf09559g02010.1
lipase class 3 family protein
lipase class 3 family protein
Nbe.v1.1.chr03g26080
Nbe.v1.1.chr03g26080.1
Nbe.v1.s00150g26080
Nbe.v1.1.chr03:91488773-91495690
-
Niben101Scf00530g10010.1
highly ABA-induced PP2C protein 2
highly ABA-induced PP2C gene 2
Nbe.v1.1.chr03g41500
Nbe.v1.1.chr03g41500.1
Nbe.v1.s00150g41500
Nbe.v1.1.chr03:126052255-126052911
+
DNA (cytosine-5-)-methyltransferase family protein
DNA (cytosine-5-)-methyltransferase family protein
Nbe.v1.1.chr01g25740
Nbe.v1.1.chr01g25740.1
Nbe.v1.s00160g25740
Nbe.v1.1.chr01:46744420-46745522
-
Niben101Scf07321g00040.1
Toll-Interleukin-Resistance (TIR) domain-containing protein
Toll-Interleukin-Resistance (TIR) domain-containing protein
Nbe.v1.1.chr11g13000
Nbe.v1.1.chr11g13000.1
Nbe.v1.s00170g13000
Nbe.v1.1.chr11:95265218-95265571
-
myb-like transcription factor family protein
myb-like transcription factor family protein
Nbe.v1.1.chr11g18390
Nbe.v1.1.chr11g18390.1
Nbe.v1.s00170g18390
Nbe.v1.1.chr11:81793577-81802231
+
Niben101Scf07321g00040.1
Disease resistance protein (TIR-NBS-LRR class) family
NULL
Nbe.v1.1.chr11g20590
Nbe.v1.1.chr11g20590.1
Nbe.v1.s00170g20590
Nbe.v1.1.chr11:76210729-76211576
+
Niben101Scf00646g08008.1
rRNA processing protein-like protein
rRNA processing protein-related
Nbe.v1.1.chr16g05670
Nbe.v1.1.chr16g05670.1
Nbe.v1.s00180g05670
Nbe.v1.1.chr16:88397061-88397609
-
Niben101Scf04841g00024.1
No description
Nbe.v1.1.chr16g08170
Nbe.v1.1.chr16g08170.1
Nbe.v1.s00180g08170
Nbe.v1.1.chr16:97901159-97902973
-
Niben101Scf02589g04005.1
ARM repeat superfamily protein
ARM repeat superfamily protein
Nbe.v1.1.chr16g15970
Nbe.v1.1.chr16g15970.1
Nbe.v1.s00180g15970
Nbe.v1.1.chr16:128497289-128553213
+
Niben101Scf04198g01001.1
glutamate synthase 1
glutamate synthase 1
Nbe.v1.1.chr16g29310
Nbe.v1.1.chr16g29310.1
Nbe.v1.s00180g29310
Nbe.v1.1.chr16:174834683-174843065
-
myb-like transcription factor family protein
myb-like transcription factor family protein
Nbe.v1.1.chr15g14010
Nbe.v1.1.chr15g14010.1
Nbe.v1.s00190g14010
Nbe.v1.1.chr15:131880378-131881019
+
Niben101Scf01374g11013.1
hydroxyproline-rich glycoprotein family protein
hydroxyproline-rich glycoprotein family protein
Nbe.v1.1.chr15g22890
Nbe.v1.1.chr15g22890.1
Nbe.v1.s00190g22890
Nbe.v1.1.chr15:98954737-98955248
+
No description
Nbe.v1.1.chr16g49640
Nbe.v1.1.chr16g49640.1
Nbe.v1.s00200g18230
Nbe.v1.1.chr16:56032250-56033471
+
Niben101Scf16234g01018.1
MuDR family transposase
NULL
Nbe.v1.1.chr15g41300
Nbe.v1.1.chr15g41300.1
Nbe.v1.s00210g08950
Nbe.v1.1.chr15:33760884-33761450
-
Niben101Scf12589g00033.1
pectinesterase family protein
pectinesterase family protein
Nbe.v1.1.chr15g43020
Nbe.v1.1.chr15g43020.1
Nbe.v1.s00210g10670
Nbe.v1.1.chr15:27470699-27495140
+
Niben101Scf12966g00016.1
glutamate synthase 1
glutamate synthase 1