N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 50

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g18340
Nbe.v1.1.chr17g18340.1
Nbe.v1.s00010g18340
Nbe.v1.1.chr17:126161201-126161476
+
Niben101Scf04832g02004.1
zinc ion binding protein
zinc ion binding
Nbe.v1.1.chr17g21440
Nbe.v1.1.chr17g21440.1
Nbe.v1.s00010g21440
Nbe.v1.1.chr17:113895919-113899710
+
Avr9/Cf-9 rapidly elicited protein
NULL
Nbe.v1.1.chr05g10250
Nbe.v1.1.chr05g10250.1
Nbe.v1.s00030g10250
Nbe.v1.1.chr05:35226931-35227296
+
Histone H3 K4-specific methyltransferase SET7/9 family protein
Histone H3 K4-specific methyltransferase SET7/9 family protein
Nbe.v1.1.chr05g15340
Nbe.v1.1.chr05g15340.1
Nbe.v1.s00030g15340
Nbe.v1.1.chr05:51975982-51981900
+
Niben101Scf00031g00002.1
Alg9-like mannosyltransferase family
Alg9-like mannosyltransferase family
Nbe.v1.1.chr05g16190
Nbe.v1.1.chr05g16190.1
Nbe.v1.s00030g16190
Nbe.v1.1.chr05:55215143-55223951
+
No description
Nbe.v1.1.chr09g32660
Nbe.v1.1.chr09g32660.1
Nbe.v1.s00040g32660
Nbe.v1.1.chr09:38600958-38605876
-
sodium hydrogen exchanger 2
NULL
Nbe.v1.1.chr09g40570
Nbe.v1.1.chr09g40570.1
Nbe.v1.s00040g40570
Nbe.v1.1.chr09:7540542-7544938
+
No description
Nbe.v1.1.chr10g20540
Nbe.v1.1.chr10g20540.1
Nbe.v1.s00050g20540
Nbe.v1.1.chr10:70323437-70329776
+
No description
Nbe.v1.1.chr19g04040
Nbe.v1.1.chr19g04040.1
Nbe.v1.s00060g04040
Nbe.v1.1.chr19:129898466-129900088
+
No description
Nbe.v1.1.chr19g07060
Nbe.v1.1.chr19g07060.1
Nbe.v1.s00060g07060
Nbe.v1.1.chr19:117087785-117095408
-
No description
Nbe.v1.1.chr12g07650
Nbe.v1.1.chr12g07650.1
Nbe.v1.s00070g07650
Nbe.v1.1.chr12:115923529-115930417
+
DCD (Development and Cell Death) domain protein
DCD (Development and Cell Death) domain protein
Nbe.v1.1.chr12g23890
Nbe.v1.1.chr12g23890.1
Nbe.v1.s00070g23890
Nbe.v1.1.chr12:61255161-61261423
+
No description
Nbe.v1.1.chr12g33300
Nbe.v1.1.chr12g33300.1
Nbe.v1.s00070g33300
Nbe.v1.1.chr12:33991918-33997352
+
Niben101Scf00034g01012.1
related to vernalization1 1
NULL
Nbe.v1.1.chr08g27640
Nbe.v1.1.chr08g27640.1
Nbe.v1.s00080g27640
Nbe.v1.1.chr08:99563988-99574452
-
Niben101Scf01460g04028.1
Endosomal targeting BRO1-like domain-containing protein
Endosomal targeting BRO1-like domain-containing protein
Nbe.v1.1.chr08g31430
Nbe.v1.1.chr08g31430.1
Nbe.v1.s00080g31430
Nbe.v1.1.chr08:113654689-113656565
-
No description
Nbe.v1.1.chr08g31440
Nbe.v1.1.chr08g31440.1
Nbe.v1.s00080g31440
Nbe.v1.1.chr08:113656611-113660899
-
No description
Nbe.v1.1.chr08g31450
Nbe.v1.1.chr08g31450.1
Nbe.v1.s00080g31450
Nbe.v1.1.chr08:113661583-113663006
-
No description
Nbe.v1.1.chr02g37900
Nbe.v1.1.chr02g37900.1
Nbe.v1.s00090g37900
Nbe.v1.1.chr02:27953467-27971252
+
Niben101Scf04028g01007.1
histone-lysine N-methyltransferase
NULL
Nbe.v1.1.chr02g42540
Nbe.v1.1.chr02g42540.1
Nbe.v1.s00090g42540
Nbe.v1.1.chr02:9045462-9051879
+
No description
Nbe.v1.1.chr07g23940
Nbe.v1.1.chr07g23940.1
Nbe.v1.s00100g23940
Nbe.v1.1.chr07:49534236-49535691
+
No description
Nbe.v1.1.chr07g33570
Nbe.v1.1.chr07g33570.1
Nbe.v1.s00100g33570
Nbe.v1.1.chr07:13483349-13485063
-
No description
Nbe.v1.1.chr18g14280
Nbe.v1.1.chr18g14280.1
Nbe.v1.s00110g14280
Nbe.v1.1.chr18:94892422-94895683
+
No description
Nbe.v1.1.chr18g15170
Nbe.v1.1.chr18g15170.1
Nbe.v1.s00110g15170
Nbe.v1.1.chr18:91688049-91692500
-
hypothetical protein
NULL
Nbe.v1.1.chr18g18120
Nbe.v1.1.chr18g18120.1
Nbe.v1.s00110g18120
Nbe.v1.1.chr18:80532583-80541836
+
No description
Nbe.v1.1.chr18g22190
Nbe.v1.1.chr18g22190.1
Nbe.v1.s00110g22190
Nbe.v1.1.chr18:66080521-66082622
+
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr18g22710
Nbe.v1.1.chr18g22710.1
Nbe.v1.s00110g22710
Nbe.v1.1.chr18:64633416-64636033
-
No description
Nbe.v1.1.chr18g24880
Nbe.v1.1.chr18g24880.1
Nbe.v1.s00110g24880
Nbe.v1.1.chr18:56991142-56999092
-
No description
Nbe.v1.1.chr18g31240
Nbe.v1.1.chr18g31240.1
Nbe.v1.s00110g31240
Nbe.v1.1.chr18:36588838-36596262
-
No description
Nbe.v1.1.chr18g31510
Nbe.v1.1.chr18g31510.1
Nbe.v1.s00110g31510
Nbe.v1.1.chr18:35890321-35893757
+
Niben101Scf02824g03019.1
Armadillo/beta-catenin-like repeat family protein
Armadillo/beta-catenin-like repeat family protein
Nbe.v1.1.chr13g33210
Nbe.v1.1.chr13g33210.1
Nbe.v1.s00120g33210
Nbe.v1.1.chr13:94846924-94854711
-
Niben101Scf01573g01003.1
Transcription initiation factor TFIID subunit A
Transcription initiation factor TFIID subunit A
Nbe.v1.1.chr04g28850
Nbe.v1.1.chr04g28850.1
Nbe.v1.s00130g28850
Nbe.v1.1.chr04:16326110-16335958
-
Niben101Scf04109g03009.1
Endosomal targeting BRO1-like domain-containing protein
Endosomal targeting BRO1-like domain-containing protein
Nbe.v1.1.chr14g04180
Nbe.v1.1.chr14g04180.1
Nbe.v1.s00140g04180
Nbe.v1.1.chr14:117094113-117105348
+
No description
Nbe.v1.1.chr14g14550
Nbe.v1.1.chr14g14550.1
Nbe.v1.s00140g14550
Nbe.v1.1.chr14:82109169-82112405
-
No description
Nbe.v1.1.chr14g19410
Nbe.v1.1.chr14g19410.1
Nbe.v1.s00140g19410
Nbe.v1.1.chr14:69345650-69362552
-
Niben101Scf00884g00009.1
phosphatidylglycerolphosphate synthase 1
phosphatidylglycerolphosphate synthase 1
Nbe.v1.1.chr14g40110
Nbe.v1.1.chr14g40110.1
Nbe.v1.s00140g40110
Nbe.v1.1.chr14:6441897-6445378
-
No description
Nbe.v1.1.chr14g42230
Nbe.v1.1.chr14g42230.1
Nbe.v1.s00140g42230
Nbe.v1.1.chr14:693914-698164
-
No description
Nbe.v1.1.chr03g10660
Nbe.v1.1.chr03g10660.1
Nbe.v1.s00150g10660
Nbe.v1.1.chr03:35820608-35822793
-
transmembrane protein
NULL
Nbe.v1.1.chr03g23480
Nbe.v1.1.chr03g23480.1
Nbe.v1.s00150g23480
Nbe.v1.1.chr03:84664689-84665114
-
SPT2 chromatin protein
SPT2 chromatin protein
Nbe.v1.1.chr01g18880
Nbe.v1.1.chr01g18880.1
Nbe.v1.s00160g18880
Nbe.v1.1.chr01:65943774-65954264
+
No description
Nbe.v1.1.chr11g29430
Nbe.v1.1.chr11g29430.1
Nbe.v1.s00170g29430
Nbe.v1.1.chr11:44358593-44360225
+
No description
Nbe.v1.1.chr11g31210
Nbe.v1.1.chr11g31210.1
Nbe.v1.s00170g31210
Nbe.v1.1.chr11:37981382-37985057
-
Niben101Scf05146g00011.1
No description
Nbe.v1.1.chr11g38190
Nbe.v1.1.chr11g38190.1
Nbe.v1.s00170g38190
Nbe.v1.1.chr11:15594727-15597677
+
No description
Nbe.v1.1.chr16g15440
Nbe.v1.1.chr16g15440.1
Nbe.v1.s00180g15440
Nbe.v1.1.chr16:126020898-126023020
-
Niben101Scf08259g01002.1
cation exchanger 11
cation exchanger 11
Nbe.v1.1.chr15g01320
Nbe.v1.1.chr15g01320.1
Nbe.v1.s00190g01320
Nbe.v1.1.chr15:173244021-173252119
+
No description
Nbe.v1.1.chr15g03300
Nbe.v1.1.chr15g03300.1
Nbe.v1.s00190g03300
Nbe.v1.1.chr15:167751649-167764601
-
No description
Nbe.v1.1.chr15g07920
Nbe.v1.1.chr15g07920.1
Nbe.v1.s00190g07920
Nbe.v1.1.chr15:151244900-151255415
-
Niben101Scf00031g00002.1
Alg9-like mannosyltransferase family
Alg9-like mannosyltransferase family
Nbe.v1.1.chr15g27770
Nbe.v1.1.chr15g27770.1
Nbe.v1.s00190g27770
Nbe.v1.1.chr15:80750285-80750629
+
Niben101Scf04832g02004.1
phosphoribosylformylglycinamidine cyclo-ligase%2C chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
Nbe.v1.1.chr16g44450
Nbe.v1.1.chr16g44450.1
Nbe.v1.s00200g13040
Nbe.v1.1.chr16:35617268-35629665
+
Niben101Scf07974g03008.1
transcriptional corepressor LEUNIG
LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
Nbe.v1.1.chr16g44820
Nbe.v1.1.chr16g44820.1
Nbe.v1.s00200g13410
Nbe.v1.1.chr16:36833576-36843233
-
Niben101Scf04973g02006.1
Endosomal targeting BRO1-like domain-containing protein
Endosomal targeting BRO1-like domain-containing protein
Nbe.v1.1.chr15g48850
Nbe.v1.1.chr15g48850.1
Nbe.v1.s00210g16500
Nbe.v1.1.chr15:5810663-5811085
-
No description