N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 93

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g15420
Nbe.v1.1.chr17g15420.1
Nbe.v1.s00010g15420
Nbe.v1.1.chr17:138449443-138450187
-
No description
Nbe.v1.1.chr17g17370
Nbe.v1.1.chr17g17370.1
Nbe.v1.s00010g17370
Nbe.v1.1.chr17:129953876-129954415
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
NULL
Nbe.v1.1.chr17g21440
Nbe.v1.1.chr17g21440.1
Nbe.v1.s00010g21440
Nbe.v1.1.chr17:113895919-113899710
+
Avr9/Cf-9 rapidly elicited protein
NULL
Nbe.v1.1.chr17g27950
Nbe.v1.1.chr17g27950.1
Nbe.v1.s00010g27950
Nbe.v1.1.chr17:90743848-90744345
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr17g31990
Nbe.v1.1.chr17g31990.1
Nbe.v1.s00010g31990
Nbe.v1.1.chr17:77424108-77425331
+
No description
Nbe.v1.1.chr17g44460
Nbe.v1.1.chr17g44460.1
Nbe.v1.s00010g44460
Nbe.v1.1.chr17:27838550-27839074
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr17g52640
Nbe.v1.1.chr17g52640.1
Nbe.v1.s00010g52640
Nbe.v1.1.chr17:5493034-5493393
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr06g18680
Nbe.v1.1.chr06g18680.1
Nbe.v1.s00020g18680
Nbe.v1.1.chr06:86973329-86973913
-
Ribonuclease H-like superfamily protein
Ribonuclease H-like superfamily protein
Nbe.v1.1.chr06g25800
Nbe.v1.1.chr06g25800.1
Nbe.v1.s00020g25800
Nbe.v1.1.chr06:60435696-60445067
+
Exostosin family protein
Exostosin family protein
Nbe.v1.1.chr05g16190
Nbe.v1.1.chr05g16190.1
Nbe.v1.s00030g16190
Nbe.v1.1.chr05:55215143-55223951
+
No description
Nbe.v1.1.chr05g27920
Nbe.v1.1.chr05g27920.1
Nbe.v1.s00030g27920
Nbe.v1.1.chr05:98343056-98343975
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
NULL
Nbe.v1.1.chr09g05650
Nbe.v1.1.chr09g05650.1
Nbe.v1.s00040g05650
Nbe.v1.1.chr09:130055451-130055933
+
Niben101Scf35993g00002.1
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
NULL
Nbe.v1.1.chr09g11730
Nbe.v1.1.chr09g11730.1
Nbe.v1.s00040g11730
Nbe.v1.1.chr09:109152188-109153860
+
No description
Nbe.v1.1.chr09g15840
Nbe.v1.1.chr09g15840.1
Nbe.v1.s00040g15840
Nbe.v1.1.chr09:93370272-93371671
+
No description
Nbe.v1.1.chr09g32660
Nbe.v1.1.chr09g32660.1
Nbe.v1.s00040g32660
Nbe.v1.1.chr09:38600958-38605876
-
sodium hydrogen exchanger 2
NULL
Nbe.v1.1.chr09g40570
Nbe.v1.1.chr09g40570.1
Nbe.v1.s00040g40570
Nbe.v1.1.chr09:7540542-7544938
+
No description
Nbe.v1.1.chr10g20540
Nbe.v1.1.chr10g20540.1
Nbe.v1.s00050g20540
Nbe.v1.1.chr10:70323437-70329776
+
No description
Nbe.v1.1.chr10g37950
Nbe.v1.1.chr10g37950.1
Nbe.v1.s00050g37950
Nbe.v1.1.chr10:129681788-129682069
-
HSP20-like chaperones superfamily protein
HSP20-like chaperones superfamily protein
Nbe.v1.1.chr19g07060
Nbe.v1.1.chr19g07060.1
Nbe.v1.s00060g07060
Nbe.v1.1.chr19:117087785-117095408
-
No description
Nbe.v1.1.chr19g19780
Nbe.v1.1.chr19g19780.1
Nbe.v1.s00060g19780
Nbe.v1.1.chr19:72483077-72493147
-
Niben101Scf06909g04007.1
aminophospholipid ATPase 1
aminophospholipid ATPase 1
Nbe.v1.1.chr19g24210
Nbe.v1.1.chr19g24210.1
Nbe.v1.s00060g24210
Nbe.v1.1.chr19:54367683-54370835
+
No description
Nbe.v1.1.chr19g39220
Nbe.v1.1.chr19g39220.1
Nbe.v1.s00060g39220
Nbe.v1.1.chr19:17017822-17025735
+
mitochondrial ferredoxin 1
NULL
Nbe.v1.1.chr12g05090
Nbe.v1.1.chr12g05090.1
Nbe.v1.s00070g05090
Nbe.v1.1.chr12:124604797-124605372
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr12g07650
Nbe.v1.1.chr12g07650.1
Nbe.v1.s00070g07650
Nbe.v1.1.chr12:115923529-115930417
+
DCD (Development and Cell Death) domain protein
DCD (Development and Cell Death) domain protein
Nbe.v1.1.chr12g12300
Nbe.v1.1.chr12g12300.1
Nbe.v1.s00070g12300
Nbe.v1.1.chr12:98967182-98968471
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr12g23890
Nbe.v1.1.chr12g23890.1
Nbe.v1.s00070g23890
Nbe.v1.1.chr12:61255161-61261423
+
No description
Nbe.v1.1.chr12g33300
Nbe.v1.1.chr12g33300.1
Nbe.v1.s00070g33300
Nbe.v1.1.chr12:33991918-33997352
+
Niben101Scf00034g01012.1
related to vernalization1 1
NULL
Nbe.v1.1.chr12g39420
Nbe.v1.1.chr12g39420.1
Nbe.v1.s00070g39420
Nbe.v1.1.chr12:14227962-14228600
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr12g41340
Nbe.v1.1.chr12g41340.1
Nbe.v1.s00070g41340
Nbe.v1.1.chr12:8475284-8475901
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
NULL
Nbe.v1.1.chr12g42670
Nbe.v1.1.chr12g42670.1
Nbe.v1.s00070g42670
Nbe.v1.1.chr12:4811172-4811729
-
Ribonuclease H-like superfamily protein
Ribonuclease H-like superfamily protein
Nbe.v1.1.chr08g07180
Nbe.v1.1.chr08g07180.1
Nbe.v1.s00080g07180
Nbe.v1.1.chr08:24792233-24797685
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr08g16630
Nbe.v1.1.chr08g16630.1
Nbe.v1.s00080g16630
Nbe.v1.1.chr08:57925149-57925544
+
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
NULL
Nbe.v1.1.chr08g19950
Nbe.v1.1.chr08g19950.1
Nbe.v1.s00080g19950
Nbe.v1.1.chr08:72902708-72902995
-
Disease resistance protein (TIR-NBS-LRR class) family
NULL
Nbe.v1.1.chr08g29950
Nbe.v1.1.chr08g29950.1
Nbe.v1.s00080g29950
Nbe.v1.1.chr08:108383928-108384320
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr08g31430
Nbe.v1.1.chr08g31430.1
Nbe.v1.s00080g31430
Nbe.v1.1.chr08:113654689-113656565
-
No description
Nbe.v1.1.chr08g31440
Nbe.v1.1.chr08g31440.1
Nbe.v1.s00080g31440
Nbe.v1.1.chr08:113656611-113660899
-
No description
Nbe.v1.1.chr08g38600
Nbe.v1.1.chr08g38600.1
Nbe.v1.s00080g38600
Nbe.v1.1.chr08:139374922-139375248
+
No description
Nbe.v1.1.chr02g05730
Nbe.v1.1.chr02g05730.1
Nbe.v1.s00090g05730
Nbe.v1.1.chr02:130624808-130625125
+
Alpha amylase family protein
Alpha amylase family protein
Nbe.v1.1.chr02g33140
Nbe.v1.1.chr02g33140.1
Nbe.v1.s00090g33140
Nbe.v1.1.chr02:51125496-51130314
-
No description
Nbe.v1.1.chr02g35380
Nbe.v1.1.chr02g35380.1
Nbe.v1.s00090g35380
Nbe.v1.1.chr02:38249602-38249937
+
Niben101Scf01474g01001.1
UDP-glucosyl transferase 71B5
UDP-glucosyl transferase 71B5
Nbe.v1.1.chr02g37900
Nbe.v1.1.chr02g37900.1
Nbe.v1.s00090g37900
Nbe.v1.1.chr02:27953467-27971252
+
Niben101Scf04028g01007.1
histone-lysine N-methyltransferase
NULL
Nbe.v1.1.chr02g42540
Nbe.v1.1.chr02g42540.1
Nbe.v1.s00090g42540
Nbe.v1.1.chr02:9045462-9051879
+
No description
Nbe.v1.1.chr02g42680
Nbe.v1.1.chr02g42680.1
Nbe.v1.s00090g42680
Nbe.v1.1.chr02:8453332-8455384
+
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr07g04500
Nbe.v1.1.chr07g04500.1
Nbe.v1.s00100g04500
Nbe.v1.1.chr07:127428167-127431290
+
Niben101Scf03953g03001.1
roline-rich extensin-like receptor kinase 4
NULL
Nbe.v1.1.chr07g23940
Nbe.v1.1.chr07g23940.1
Nbe.v1.s00100g23940
Nbe.v1.1.chr07:49534236-49535691
+
No description
Nbe.v1.1.chr07g33570
Nbe.v1.1.chr07g33570.1
Nbe.v1.s00100g33570
Nbe.v1.1.chr07:13483349-13485063
-
No description
Nbe.v1.1.chr07g37090
Nbe.v1.1.chr07g37090.1
Nbe.v1.s00100g37090
Nbe.v1.1.chr07:1044492-1049850
-
Niben101Scf06295g04002.1
lectin protein kinase family protein
NULL
Nbe.v1.1.chr18g06040
Nbe.v1.1.chr18g06040.1
Nbe.v1.s00110g06040
Nbe.v1.1.chr18:123095085-123095399
-
mucin-5AC-like protein
NULL
Nbe.v1.1.chr18g06350
Nbe.v1.1.chr18g06350.1
Nbe.v1.s00110g06350
Nbe.v1.1.chr18:122135628-122135909
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr18g14280
Nbe.v1.1.chr18g14280.1
Nbe.v1.s00110g14280
Nbe.v1.1.chr18:94892422-94895683
+
No description
Nbe.v1.1.chr18g15170
Nbe.v1.1.chr18g15170.1
Nbe.v1.s00110g15170
Nbe.v1.1.chr18:91688049-91692500
-
hypothetical protein
NULL
Nbe.v1.1.chr18g18120
Nbe.v1.1.chr18g18120.1
Nbe.v1.s00110g18120
Nbe.v1.1.chr18:80532583-80541836
+
No description
Nbe.v1.1.chr18g20000
Nbe.v1.1.chr18g20000.1
Nbe.v1.s00110g20000
Nbe.v1.1.chr18:73724414-73724818
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr18g21490
Nbe.v1.1.chr18g21490.1
Nbe.v1.s00110g21490
Nbe.v1.1.chr18:68507510-68509557
-
Niben101Scf12515g00030.1
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr18g22190
Nbe.v1.1.chr18g22190.1
Nbe.v1.s00110g22190
Nbe.v1.1.chr18:66080521-66082622
+
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr18g22710
Nbe.v1.1.chr18g22710.1
Nbe.v1.s00110g22710
Nbe.v1.1.chr18:64633416-64636033
-
No description
Nbe.v1.1.chr18g24880
Nbe.v1.1.chr18g24880.1
Nbe.v1.s00110g24880
Nbe.v1.1.chr18:56991142-56999092
-
No description
Nbe.v1.1.chr18g26570
Nbe.v1.1.chr18g26570.1
Nbe.v1.s00110g26570
Nbe.v1.1.chr18:50795183-50795734
-
Ribonuclease H-like superfamily protein
Ribonuclease H-like superfamily protein
Nbe.v1.1.chr18g29870
Nbe.v1.1.chr18g29870.1
Nbe.v1.s00110g29870
Nbe.v1.1.chr18:40774645-40775199
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr18g31240
Nbe.v1.1.chr18g31240.1
Nbe.v1.s00110g31240
Nbe.v1.1.chr18:36588838-36596262
-
No description
Nbe.v1.1.chr18g31360
Nbe.v1.1.chr18g31360.1
Nbe.v1.s00110g31360
Nbe.v1.1.chr18:36363583-36364056
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr18g33040
Nbe.v1.1.chr18g33040.1
Nbe.v1.s00110g33040
Nbe.v1.1.chr18:32187130-32189506
-
No description
Nbe.v1.1.chr13g16980
Nbe.v1.1.chr13g16980.1
Nbe.v1.s00120g16980
Nbe.v1.1.chr13:53337132-53337620
+
Putative lysine decarboxylase family protein
Putative lysine decarboxylase family protein
Nbe.v1.1.chr13g17930
Nbe.v1.1.chr13g17930.1
Nbe.v1.s00120g17930
Nbe.v1.1.chr13:56273058-56287101
-
Niben101Scf02494g12014.1
AT-hook motif nuclear-localized protein 1
AT-hook motif nuclear-localized protein 1
Nbe.v1.1.chr13g38650
Nbe.v1.1.chr13g38650.1
Nbe.v1.s00120g38650
Nbe.v1.1.chr13:109033549-109035708
-
Niben101Scf09510g02015.1
No description
Nbe.v1.1.chr04g25380
Nbe.v1.1.chr04g25380.1
Nbe.v1.s00130g25380
Nbe.v1.1.chr04:29276814-29277092
-
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr14g04180
Nbe.v1.1.chr14g04180.1
Nbe.v1.s00140g04180
Nbe.v1.1.chr14:117094113-117105348
+
No description
Nbe.v1.1.chr14g04690
Nbe.v1.1.chr14g04690.1
Nbe.v1.s00140g04690
Nbe.v1.1.chr14:115938750-115939031
-
ARM repeat superfamily protein
ARM repeat superfamily protein
Nbe.v1.1.chr14g10350
Nbe.v1.1.chr14g10350.1
Nbe.v1.s00140g10350
Nbe.v1.1.chr14:96512278-96513431
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr14g15570
Nbe.v1.1.chr14g15570.1
Nbe.v1.s00140g15570
Nbe.v1.1.chr14:79168445-79170795
-
No description
Nbe.v1.1.chr14g19410
Nbe.v1.1.chr14g19410.1
Nbe.v1.s00140g19410
Nbe.v1.1.chr14:69345650-69362552
-
Niben101Scf00884g00009.1
phosphatidylglycerolphosphate synthase 1
phosphatidylglycerolphosphate synthase 1
Nbe.v1.1.chr14g25540
Nbe.v1.1.chr14g25540.1
Nbe.v1.s00140g25540
Nbe.v1.1.chr14:50428715-50431092
+
Niben101Scf23958g00002.1
E3 Ubiquitin ligase family protein
NULL
Nbe.v1.1.chr14g37470
Nbe.v1.1.chr14g37470.1
Nbe.v1.s00140g37470
Nbe.v1.1.chr14:13807187-13807537
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr14g40110
Nbe.v1.1.chr14g40110.1
Nbe.v1.s00140g40110
Nbe.v1.1.chr14:6441897-6445378
-
No description
Nbe.v1.1.chr14g42230
Nbe.v1.1.chr14g42230.1
Nbe.v1.s00140g42230
Nbe.v1.1.chr14:693914-698164
-
No description
Nbe.v1.1.chr03g10660
Nbe.v1.1.chr03g10660.1
Nbe.v1.s00150g10660
Nbe.v1.1.chr03:35820608-35822793
-
transmembrane protein
NULL
Nbe.v1.1.chr03g11860
Nbe.v1.1.chr03g11860.1
Nbe.v1.s00150g11860
Nbe.v1.1.chr03:40754710-40755198
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr01g18880
Nbe.v1.1.chr01g18880.1
Nbe.v1.s00160g18880
Nbe.v1.1.chr01:65943774-65954264
+
No description
Nbe.v1.1.chr01g37860
Nbe.v1.1.chr01g37860.1
Nbe.v1.s00160g37860
Nbe.v1.1.chr01:18182534-18183070
+
Niben101Scf05917g01021.1
paired amphipathic helix repeat-containing protein
paired amphipathic helix repeat-containing protein
Nbe.v1.1.chr11g22930
Nbe.v1.1.chr11g22930.1
Nbe.v1.s00170g22930
Nbe.v1.1.chr11:69639335-69639733
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr11g29430
Nbe.v1.1.chr11g29430.1
Nbe.v1.s00170g29430
Nbe.v1.1.chr11:44358593-44360225
+
No description
Nbe.v1.1.chr11g31210
Nbe.v1.1.chr11g31210.1
Nbe.v1.s00170g31210
Nbe.v1.1.chr11:37981382-37985057
-
Niben101Scf05146g00011.1
No description
Nbe.v1.1.chr11g33740
Nbe.v1.1.chr11g33740.1
Nbe.v1.s00170g33740
Nbe.v1.1.chr11:29781643-29782230
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr11g38190
Nbe.v1.1.chr11g38190.1
Nbe.v1.s00170g38190
Nbe.v1.1.chr11:15594727-15597677
+
No description
Nbe.v1.1.chr16g14490
Nbe.v1.1.chr16g14490.1
Nbe.v1.s00180g14490
Nbe.v1.1.chr16:122013227-122020863
+
Niben101Scf05950g00001.1
photosystem I light harvesting complex protein
photosystem I light harvesting complex gene 2
Nbe.v1.1.chr15g01320
Nbe.v1.1.chr15g01320.1
Nbe.v1.s00190g01320
Nbe.v1.1.chr15:173244021-173252119
+
No description
Nbe.v1.1.chr15g03300
Nbe.v1.1.chr15g03300.1
Nbe.v1.s00190g03300
Nbe.v1.1.chr15:167751649-167764601
-
No description
Nbe.v1.1.chr15g18030
Nbe.v1.1.chr15g18030.1
Nbe.v1.s00190g18030
Nbe.v1.1.chr15:116028157-116028456
+
Protein kinase family protein
Protein kinase family protein
Nbe.v1.1.chr15g31420
Nbe.v1.1.chr15g31420.1
Nbe.v1.s00190g31420
Nbe.v1.1.chr15:69515307-69515755
+
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr16g33210
Nbe.v1.1.chr16g33210.1
Nbe.v1.s00200g01800
Nbe.v1.1.chr16:4101096-4106235
-
Niben101Scf00739g00007.1
histone deacetylase 6
histone deacetylase 6
Nbe.v1.1.chr16g41590
Nbe.v1.1.chr16g41590.1
Nbe.v1.s00200g10180
Nbe.v1.1.chr16:26990361-26996223
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
NULL
Nbe.v1.1.chr16g44740
Nbe.v1.1.chr16g44740.1
Nbe.v1.s00200g13330
Nbe.v1.1.chr16:36482953-36483982
-
Uncharacterized protein family (UPF0016)
Uncharacterized protein family (UPF0016)
Nbe.v1.1.chr15g39870
Nbe.v1.1.chr15g39870.1
Nbe.v1.s00210g07520
Nbe.v1.1.chr15:39633146-39633670
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein