N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 13

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g24860
Nbe.v1.1.chr17g24860.1
Nbe.v1.s00010g24860
Nbe.v1.1.chr17:101292502-101293086
+
Niben101Scf06467g05002.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Plant invertase/pectin methylesterase inhibitor superfamily protein
Nbe.v1.1.chr05g02690
Nbe.v1.1.chr05g02690.1
Nbe.v1.s00030g02690
Nbe.v1.1.chr05:10454299-10457946
+
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Nbe.v1.1.chr05g37750
Nbe.v1.1.chr05g37750.1
Nbe.v1.s00030g37750
Nbe.v1.1.chr05:139627408-139628121
+
Niben101Scf06467g05002.1
RAB GTPase homolog A6A
RAB GTPase homolog A6A
Nbe.v1.1.chr09g38880
Nbe.v1.1.chr09g38880.1
Nbe.v1.s00040g38880
Nbe.v1.1.chr09:15877168-15878426
+
Niben101Scf12266g01004.1
Late embryogenesis abundant protein (LEA) family protein
Late embryogenesis abundant protein (LEA) family protein
Nbe.v1.1.chr19g03620
Nbe.v1.1.chr19g03620.1
Nbe.v1.s00060g03620
Nbe.v1.1.chr19:131366492-131367193
+
Dihydropterin pyrophosphokinase / Dihydropteroate synthase
Dihydropterin pyrophosphokinase / Dihydropteroate synthase
Nbe.v1.1.chr19g05650
Nbe.v1.1.chr19g05650.1
Nbe.v1.s00060g05650
Nbe.v1.1.chr19:122701048-122720921
+
Niben101Scf05827g07003.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr08g25190
Nbe.v1.1.chr08g25190.1
Nbe.v1.s00080g25190
Nbe.v1.1.chr08:90120540-90121752
+
Niben101Scf06467g05002.1
UDP-glucosyl transferase 71B1
UDP-glucosyl transferase 71B1
Nbe.v1.1.chr13g23010
Nbe.v1.1.chr13g23010.1
Nbe.v1.s00120g23010
Nbe.v1.1.chr13:70739016-70739467
+
zinc knuckle (CCHC-type) family protein
zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr03g03390
Nbe.v1.1.chr03g03390.1
Nbe.v1.s00150g03390
Nbe.v1.1.chr03:10234118-10235283
+
Niben101Scf07382g00001.1
Late embryogenesis abundant protein (LEA) family protein
Late embryogenesis abundant protein (LEA) family protein
Nbe.v1.1.chr01g15490
Nbe.v1.1.chr01g15490.1
Nbe.v1.s00160g15490
Nbe.v1.1.chr01:76867691-76869877
+
Niben101Scf01612g02008.1
transmembrane protein
NULL
Nbe.v1.1.chr01g15530
Nbe.v1.1.chr01g15530.1
Nbe.v1.s00160g15530
Nbe.v1.1.chr01:76697067-76697435
+
Niben101Scf01612g00004.1
PAS domain-containing protein tyrosine kinase family protein
PAS domain-containing protein tyrosine kinase family protein
Nbe.v1.1.chr15g16800
Nbe.v1.1.chr15g16800.1
Nbe.v1.s00190g16800
Nbe.v1.1.chr15:123101833-123103149
+
Transducin/WD40 repeat-like superfamily protein
Transducin/WD40 repeat-like superfamily protein
Nbe.v1.1.chr15g22300
Nbe.v1.1.chr15g22300.1
Nbe.v1.s00190g22300
Nbe.v1.1.chr15:101308367-101308699
-
Niben101Scf02653g00003.1
microtubule-associated futsch-like protein
NULL