N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 24

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g04120
Nbe.v1.1.chr06g04120.1
Nbe.v1.s00020g04120
Nbe.v1.1.chr06:139338094-139338363
-
cytokinin response factor 1
cytokinin response factor 1
Nbe.v1.1.chr06g14800
Nbe.v1.1.chr06g14800.1
Nbe.v1.s00020g14800
Nbe.v1.1.chr06:102388457-102388711
-
mechanosensitive channel of small conductance-like 10
mechanosensitive channel of small conductance-like 10
Nbe.v1.1.chr05g14760
Nbe.v1.1.chr05g14760.1
Nbe.v1.s00030g14760
Nbe.v1.1.chr05:49663120-49664472
-
NAC domain containing protein 82
NULL
Nbe.v1.1.chr09g09640
Nbe.v1.1.chr09g09640.1
Nbe.v1.s00040g09640
Nbe.v1.1.chr09:115979393-115992915
-
Niben101Scf03671g03028.1
E1 C-terminal related 1
E1 C-terminal related 1
Nbe.v1.1.chr09g14930
Nbe.v1.1.chr09g14930.1
Nbe.v1.s00040g14930
Nbe.v1.1.chr09:97786063-97788083
-
Niben101Scf00482g10005.1
RmlC-like cupins superfamily protein
RmlC-like cupins superfamily protein
Nbe.v1.1.chr09g32830
Nbe.v1.1.chr09g32830.1
Nbe.v1.s00040g32830
Nbe.v1.1.chr09:38155873-38156313
-
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
NULL
Nbe.v1.1.chr10g11890
Nbe.v1.1.chr10g11890.1
Nbe.v1.s00050g11890
Nbe.v1.1.chr10:39600986-39602065
-
Niben101Scf05993g00014.1
Clathrin adaptor complex small chain family protein
Clathrin adaptor complex small chain family protein
Nbe.v1.1.chr19g16210
Nbe.v1.1.chr19g16210.1
Nbe.v1.s00060g16210
Nbe.v1.1.chr19:85068873-85069776
+
DNA repair-recombination protein (RAD50)
DNA repair-recombination protein (RAD50)
Nbe.v1.1.chr19g27920
Nbe.v1.1.chr19g27920.1
Nbe.v1.s00060g27920
Nbe.v1.1.chr19:44431125-44432636
-
Niben101Scf08863g01031.1
UDP-glucosyl transferase 71D1
UDP-glucosyl transferase 71D1
Nbe.v1.1.chr12g11810
Nbe.v1.1.chr12g11810.1
Nbe.v1.s00070g11810
Nbe.v1.1.chr12:100792825-100793271
-
WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827)
Plant protein of unknown function (DUF827)
Nbe.v1.1.chr12g37520
Nbe.v1.1.chr12g37520.1
Nbe.v1.s00070g37520
Nbe.v1.1.chr12:20224932-20232417
+
Niben101Scf12102g01001.1
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Nbe.v1.1.chr08g30460
Nbe.v1.1.chr08g30460.1
Nbe.v1.s00080g30460
Nbe.v1.1.chr08:109485632-109490090
-
Niben101Scf06106g01016.1
glycosyl hydrolase family 35 protein
glycosyl hydrolase family 35 protein
Nbe.v1.1.chr07g18260
Nbe.v1.1.chr07g18260.1
Nbe.v1.s00100g18260
Nbe.v1.1.chr07:68824276-68826015
-
beta-1%2C4-N-acetylglucosaminyltransferase family protein
beta-1,4-N-acetylglucosaminyltransferase family protein
Nbe.v1.1.chr07g22690
Nbe.v1.1.chr07g22690.1
Nbe.v1.s00100g22690
Nbe.v1.1.chr07:53965059-53967697
+
Niben101Scf05697g05017.1
cold shock domain protein 1
NULL
Nbe.v1.1.chr07g29200
Nbe.v1.1.chr07g29200.1
Nbe.v1.s00100g29200
Nbe.v1.1.chr07:29302019-29302744
+
VEFS-Box of polycomb protein
VEFS-Box of polycomb protein
Nbe.v1.1.chr13g16280
Nbe.v1.1.chr13g16280.1
Nbe.v1.s00120g16280
Nbe.v1.1.chr13:50784727-50784975
-
WEB family protein (DUF827)
Plant protein of unknown function (DUF827)
Nbe.v1.1.chr14g04650
Nbe.v1.1.chr14g04650.1
Nbe.v1.s00140g04650
Nbe.v1.1.chr14:116060540-116061153
+
ABC-2 type transporter family protein
NULL
Nbe.v1.1.chr03g04570
Nbe.v1.1.chr03g04570.1
Nbe.v1.s00150g04570
Nbe.v1.1.chr03:15282594-15283112
-
Niben101Scf03457g01001.1
Serine/Threonine-kinase
NULL
Nbe.v1.1.chr03g19960
Nbe.v1.1.chr03g19960.1
Nbe.v1.s00150g19960
Nbe.v1.1.chr03:73390690-73391095
-
multidrug resistance-associated protein 11
NULL
Nbe.v1.1.chr01g15020
Nbe.v1.1.chr01g15020.1
Nbe.v1.s00160g15020
Nbe.v1.1.chr01:78078048-78085365
+
nuclear pore anchor
nuclear pore anchor
Nbe.v1.1.chr11g02230
Nbe.v1.1.chr11g02230.1
Nbe.v1.s00170g02230
Nbe.v1.1.chr11:125668598-125676737
+
Niben101Scf08264g00007.1
catalytics
catalytics
Nbe.v1.1.chr11g34640
Nbe.v1.1.chr11g34640.1
Nbe.v1.s00170g34640
Nbe.v1.1.chr11:27308448-27310555
+
Niben101Scf05372g05015.1
RmlC-like cupins superfamily protein
RmlC-like cupins superfamily protein
Nbe.v1.1.chr16g17280
Nbe.v1.1.chr16g17280.1
Nbe.v1.s00180g17280
Nbe.v1.1.chr16:133585735-133585989
+
Calmodulin-binding protein
Calmodulin-binding protein
Nbe.v1.1.chr16g27790
Nbe.v1.1.chr16g27790.1
Nbe.v1.s00180g27790
Nbe.v1.1.chr16:169441132-169441476
+
Nse4%2C component of Smc5/6 DNA repair complex
Nse4, component of Smc5/6 DNA repair complex