N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 63

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g13180
Nbe.v1.1.chr17g13180.1
Nbe.v1.s00010g13180
Nbe.v1.1.chr17:146696758-146713405
-
Niben101Scf08665g01006.1
K+ efflux antiporter 2
K+ efflux antiporter 2
Nbe.v1.1.chr06g20000
Nbe.v1.1.chr06g20000.1
Nbe.v1.s00020g20000
Nbe.v1.1.chr06:82671300-82676898
+
No description
Nbe.v1.1.chr06g23960
Nbe.v1.1.chr06g23960.1
Nbe.v1.s00020g23960
Nbe.v1.1.chr06:66965428-66965778
+
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr05g21200
Nbe.v1.1.chr05g21200.1
Nbe.v1.s00030g21200
Nbe.v1.1.chr05:72995149-72996721
-
Niben101Scf06089g00009.1
zinc knuckle (CCHC-type) family protein
zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr05g24300
Nbe.v1.1.chr05g24300.1
Nbe.v1.s00030g24300
Nbe.v1.1.chr05:84308621-84310303
+
Pentatricopeptide repeat (PPR) superfamily protein
NULL
Nbe.v1.1.chr09g05170
Nbe.v1.1.chr09g05170.1
Nbe.v1.s00040g05170
Nbe.v1.1.chr09:131602086-131604996
-
Niben101Scf13966g00013.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g29290
Nbe.v1.1.chr09g29290.1
Nbe.v1.s00040g29290
Nbe.v1.1.chr09:50660494-50682840
-
Niben101Scf00505g04013.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr09g30540
Nbe.v1.1.chr09g30540.1
Nbe.v1.s00040g30540
Nbe.v1.1.chr09:45832407-45835372
-
Auxin efflux carrier family protein
NULL
Nbe.v1.1.chr10g18810
Nbe.v1.1.chr10g18810.1
Nbe.v1.s00050g18810
Nbe.v1.1.chr10:65075803-65077912
+
Niben101Scf03129g07010.1
Plant invertase/pectin methylesterase inhibitor superfamily
Plant invertase/pectin methylesterase inhibitor superfamily
Nbe.v1.1.chr19g04040
Nbe.v1.1.chr19g04040.1
Nbe.v1.s00060g04040
Nbe.v1.1.chr19:129898466-129900088
+
No description
Nbe.v1.1.chr19g28860
Nbe.v1.1.chr19g28860.1
Nbe.v1.s00060g28860
Nbe.v1.1.chr19:42210164-42212373
-
Niben101Scf06172g00013.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr19g29620
Nbe.v1.1.chr19g29620.1
Nbe.v1.s00060g29620
Nbe.v1.1.chr19:40611940-40613505
+
Niben101Scf04626g00009.1
Peroxidase superfamily protein
Peroxidase superfamily protein
Nbe.v1.1.chr19g30800
Nbe.v1.1.chr19g30800.1
Nbe.v1.s00060g30800
Nbe.v1.1.chr19:38038667-38040747
+
Niben101Scf07788g04023.1
MATE efflux family protein
MATE efflux family protein
Nbe.v1.1.chr12g09090
Nbe.v1.1.chr12g09090.1
Nbe.v1.s00070g09090
Nbe.v1.1.chr12:110751408-110751734
-
Pectate lyase family protein
Pectate lyase family protein
Nbe.v1.1.chr12g14150
Nbe.v1.1.chr12g14150.1
Nbe.v1.s00070g14150
Nbe.v1.1.chr12:91521730-91525881
+
Niben101Scf00072g10012.1
Auxin efflux carrier family protein
NULL
Nbe.v1.1.chr12g20930
Nbe.v1.1.chr12g20930.1
Nbe.v1.s00070g20930
Nbe.v1.1.chr12:70042056-70042495
-
Niben101Scf05916g02016.1
glutathione S-transferase TAU 15
glutathione S-transferase TAU 15
Nbe.v1.1.chr12g23890
Nbe.v1.1.chr12g23890.1
Nbe.v1.s00070g23890
Nbe.v1.1.chr12:61255161-61261423
+
No description
Nbe.v1.1.chr12g37400
Nbe.v1.1.chr12g37400.1
Nbe.v1.s00070g37400
Nbe.v1.1.chr12:20734079-20734408
+
phosphate transporter 1%3B4
phosphate transporter 1;4
Nbe.v1.1.chr12g39920
Nbe.v1.1.chr12g39920.1
Nbe.v1.s00070g39920
Nbe.v1.1.chr12:12726510-12728190
-
Niben101Scf00639g02005.1
FER-like regulator of iron uptake
NULL
Nbe.v1.1.chr08g10810
Nbe.v1.1.chr08g10810.1
Nbe.v1.s00080g10810
Nbe.v1.1.chr08:37772226-37776169
+
Niben101Scf11741g00001.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr08g31430
Nbe.v1.1.chr08g31430.1
Nbe.v1.s00080g31430
Nbe.v1.1.chr08:113654689-113656565
-
No description
Nbe.v1.1.chr08g31440
Nbe.v1.1.chr08g31440.1
Nbe.v1.s00080g31440
Nbe.v1.1.chr08:113656611-113660899
-
No description
Nbe.v1.1.chr08g40040
Nbe.v1.1.chr08g40040.1
Nbe.v1.s00080g40040
Nbe.v1.1.chr08:143713191-143716399
+
Niben101Scf01222g01011.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr07g34540
Nbe.v1.1.chr07g34540.1
Nbe.v1.s00100g34540
Nbe.v1.1.chr07:10608129-10610687
-
Niben101Scf03262g02006.1
Leucine-rich repeat protein kinase family protein
Leucine-rich repeat protein kinase family protein
Nbe.v1.1.chr18g05820
Nbe.v1.1.chr18g05820.1
Nbe.v1.s00110g05820
Nbe.v1.1.chr18:123513782-123516709
+
DNAse I-like superfamily protein
DNAse I-like superfamily protein
Nbe.v1.1.chr18g19100
Nbe.v1.1.chr18g19100.1
Nbe.v1.s00110g19100
Nbe.v1.1.chr18:76898663-76899007
+
hypothetical protein
NULL
Nbe.v1.1.chr18g30780
Nbe.v1.1.chr18g30780.1
Nbe.v1.s00110g30780
Nbe.v1.1.chr18:38029429-38030229
+
pumilio 5
pumilio 5
Nbe.v1.1.chr18g41910
Nbe.v1.1.chr18g41910.1
Nbe.v1.s00110g41910
Nbe.v1.1.chr18:717095-720764
+
Niben101Scf05434g03014.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr13g00240
Nbe.v1.1.chr13g00240.1
Nbe.v1.s00120g00240
Nbe.v1.1.chr13:662178-666051
+
Niben101Scf01409g00016.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr13g10720
Nbe.v1.1.chr13g10720.1
Nbe.v1.s00120g10720
Nbe.v1.1.chr13:33084720-33089319
-
Niben101Scf07451g01004.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr13g14450
Nbe.v1.1.chr13g14450.1
Nbe.v1.s00120g14450
Nbe.v1.1.chr13:42049502-42057953
+
Niben101Scf09582g01008.1
actin-related protein 8
actin-related protein 8
Nbe.v1.1.chr13g36920
Nbe.v1.1.chr13g36920.1
Nbe.v1.s00120g36920
Nbe.v1.1.chr13:104583726-104586546
+
Niben101Scf05956g01015.1
BAX inhibitor 1
BAX inhibitor 1
Nbe.v1.1.chr04g09090
Nbe.v1.1.chr04g09090.1
Nbe.v1.s00130g09090
Nbe.v1.1.chr04:89436873-89437732
-
ovate family protein 13
ovate family protein 13
Nbe.v1.1.chr04g27560
Nbe.v1.1.chr04g27560.1
Nbe.v1.s00130g27560
Nbe.v1.1.chr04:21041015-21042286
+
Niben101Scf00193g01010.1
non-ATPase subunit 9
NULL
Nbe.v1.1.chr04g27750
Nbe.v1.1.chr04g27750.1
Nbe.v1.s00130g27750
Nbe.v1.1.chr04:20570758-20573099
-
Niben101Scf03971g02003.1
suppressor SRP40-like protein
NULL
Nbe.v1.1.chr04g29160
Nbe.v1.1.chr04g29160.1
Nbe.v1.s00130g29160
Nbe.v1.1.chr04:15529665-15532618
+
Niben101Scf06090g02010.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr14g14400
Nbe.v1.1.chr14g14400.1
Nbe.v1.s00140g14400
Nbe.v1.1.chr14:82505426-82505818
-
lon protease 1
lon protease 1
Nbe.v1.1.chr14g14550
Nbe.v1.1.chr14g14550.1
Nbe.v1.s00140g14550
Nbe.v1.1.chr14:82109169-82112405
-
No description
Nbe.v1.1.chr14g16380
Nbe.v1.1.chr14g16380.1
Nbe.v1.s00140g16380
Nbe.v1.1.chr14:77395460-77405212
-
Niben101Scf02358g02002.1
serine carboxypeptidase-like 27
serine carboxypeptidase-like 27
Nbe.v1.1.chr14g20240
Nbe.v1.1.chr14g20240.1
Nbe.v1.s00140g20240
Nbe.v1.1.chr14:67182172-67186570
-
Niben101Scf01107g00011.1
Transducin/WD40 repeat-like superfamily protein
Transducin/WD40 repeat-like superfamily protein
Nbe.v1.1.chr14g22450
Nbe.v1.1.chr14g22450.1
Nbe.v1.s00140g22450
Nbe.v1.1.chr14:61193193-61196009
-
Niben101Scf07044g00008.1
Auxin efflux carrier family protein
NULL
Nbe.v1.1.chr14g40800
Nbe.v1.1.chr14g40800.1
Nbe.v1.s00140g40800
Nbe.v1.1.chr14:4461450-4464324
-
Niben101Scf02303g00023.1
BAX inhibitor 1
BAX inhibitor 1
Nbe.v1.1.chr03g23480
Nbe.v1.1.chr03g23480.1
Nbe.v1.s00150g23480
Nbe.v1.1.chr03:84664689-84665114
-
SPT2 chromatin protein
SPT2 chromatin protein
Nbe.v1.1.chr03g39290
Nbe.v1.1.chr03g39290.1
Nbe.v1.s00150g39290
Nbe.v1.1.chr03:121680330-121684137
+
Niben101Scf08653g07017.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr01g14060
Nbe.v1.1.chr01g14060.1
Nbe.v1.s00160g14060
Nbe.v1.1.chr01:81636937-81640247
-
Niben101Scf00293g09003.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr01g15870
Nbe.v1.1.chr01g15870.1
Nbe.v1.s00160g15870
Nbe.v1.1.chr01:75463945-75465374
+
Niben101Scf08441g00001.1
phragmoplastin interacting protein 1
phragmoplastin interacting protein 1
Nbe.v1.1.chr01g34000
Nbe.v1.1.chr01g34000.1
Nbe.v1.s00160g34000
Nbe.v1.1.chr01:27560846-27563736
+
protein kinase family protein / WD-40 repeat family protein
protein kinase family protein / WD-40 repeat family protein
Nbe.v1.1.chr01g36280
Nbe.v1.1.chr01g36280.1
Nbe.v1.s00160g36280
Nbe.v1.1.chr01:22208912-22221262
+
Niben101Scf07168g00003.1
K+ efflux antiporter 2
K+ efflux antiporter 2
Nbe.v1.1.chr01g45290
Nbe.v1.1.chr01g45290.1
Nbe.v1.s00160g45290
Nbe.v1.1.chr01:1822437-1828008
+
Niben101Scf04223g01035.1
like AUXIN RESISTANT 2
like AUXIN RESISTANT 2
Nbe.v1.1.chr11g26860
Nbe.v1.1.chr11g26860.1
Nbe.v1.s00170g26860
Nbe.v1.1.chr11:53494693-53497563
+
Niben101Scf03006g02002.1
L-aspartate oxidase
L-aspartate oxidase
Nbe.v1.1.chr11g27390
Nbe.v1.1.chr11g27390.1
Nbe.v1.s00170g27390
Nbe.v1.1.chr11:52034139-52036140
-
Niben101Scf00414g08002.1
transmembrane protein C9orf5 protein
NULL
Nbe.v1.1.chr11g27750
Nbe.v1.1.chr11g27750.1
Nbe.v1.s00170g27750
Nbe.v1.1.chr11:50603109-50606929
-
Niben101Scf10189g01001.1
Calcium-binding EF-hand family protein
NULL
Nbe.v1.1.chr11g30140
Nbe.v1.1.chr11g30140.1
Nbe.v1.s00170g30140
Nbe.v1.1.chr11:41496432-41498377
-
Niben101Scf02249g03002.1
Transducin family protein / WD-40 repeat family protein
Transducin family protein / WD-40 repeat family protein
Nbe.v1.1.chr16g00880
Nbe.v1.1.chr16g00880.1
Nbe.v1.s00180g00880
Nbe.v1.1.chr16:71015204-71028062
-
Niben101Scf00948g00001.1
Auxin efflux carrier family protein
NULL
Nbe.v1.1.chr16g00890
Nbe.v1.1.chr16g00890.1
Nbe.v1.s00180g00890
Nbe.v1.1.chr16:71034484-71036655
-
Niben101Scf00948g00001.1
Auxin efflux carrier family protein
NULL
Nbe.v1.1.chr16g00910
Nbe.v1.1.chr16g00910.1
Nbe.v1.s00180g00910
Nbe.v1.1.chr16:71066971-71068395
-
Niben101Scf00948g00001.1
Auxin efflux carrier family protein
NULL
Nbe.v1.1.chr16g11780
Nbe.v1.1.chr16g11780.1
Nbe.v1.s00180g11780
Nbe.v1.1.chr16:112313887-112317318
+
Niben101Scf19315g00012.1
calmodulin-binding family protein
NULL
Nbe.v1.1.chr16g12270
Nbe.v1.1.chr16g12270.1
Nbe.v1.s00180g12270
Nbe.v1.1.chr16:113768118-113770916
-
Niben101Scf10031g04007.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr15g15200
Nbe.v1.1.chr15g15200.1
Nbe.v1.s00190g15200
Nbe.v1.1.chr15:128483970-128493433
+
Niben101Scf09582g01008.1
actin-related protein 8
actin-related protein 8
Nbe.v1.1.chr15g16860
Nbe.v1.1.chr15g16860.1
Nbe.v1.s00190g16860
Nbe.v1.1.chr15:122835236-122838096
-
Niben101Scf04157g01008.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr16g46080
Nbe.v1.1.chr16g46080.1
Nbe.v1.s00200g14670
Nbe.v1.1.chr16:41488690-41491061
-
Niben101Scf03971g02003.1
suppressor SRP40-like protein
NULL
Nbe.v1.1.chr16g46330
Nbe.v1.1.chr16g46330.1
Nbe.v1.s00200g14920
Nbe.v1.1.chr16:42089092-42090363
+
Niben101Scf08163g00001.1
non-ATPase subunit 9
NULL