N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 65

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g15280
Nbe.v1.1.chr17g15280.1
Nbe.v1.s00010g15280
Nbe.v1.1.chr17:139091483-139091932
-
Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g30030
Nbe.v1.1.chr17g30030.1
Nbe.v1.s00010g30030
Nbe.v1.1.chr17:84643105-84669076
-
Niben101Scf05767g08017.1
Spc97 / Spc98 family of spindle pole body (SBP) component
Spc97 / Spc98 family of spindle pole body (SBP) component
Nbe.v1.1.chr17g44310
Nbe.v1.1.chr17g44310.1
Nbe.v1.s00010g44310
Nbe.v1.1.chr17:28363145-28365199
-
Niben101Scf06065g02015.1
plant U-box 13
plant U-box 13
Nbe.v1.1.chr06g09750
Nbe.v1.1.chr06g09750.1
Nbe.v1.s00020g09750
Nbe.v1.1.chr06:120545897-120553612
-
Niben101Scf06065g02015.1
ARM repeat superfamily protein
ARM repeat superfamily protein
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr06g41430
Nbe.v1.1.chr06g41430.1
Nbe.v1.s00020g41430
Nbe.v1.1.chr06:3226975-3227304
+
casein kinase I-like 4
casein kinase I-like 4
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g01160
Nbe.v1.1.chr09g01160.1
Nbe.v1.s00040g01160
Nbe.v1.1.chr09:142970057-142982113
-
Niben101Scf05300g01001.1
Kinesin motor family protein
Kinesin motor family protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g31320
Nbe.v1.1.chr10g31320.1
Nbe.v1.s00050g31320
Nbe.v1.1.chr10:106306338-106306715
+
Zinc finger%2C C3HC4 type (RING finger) family protein
Zinc finger, C3HC4 type (RING finger) family protein
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g12850
Nbe.v1.1.chr19g12850.1
Nbe.v1.s00060g12850
Nbe.v1.1.chr19:94071660-94072784
-
Niben101Scf03674g01015.1
cytochrome P450%2C family 94%2C subfamily C%2C polypeptide 1
cytochrome P450, family 94, subfamily C, polypeptide 1
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g14540
Nbe.v1.1.chr19g14540.1
Nbe.v1.s00060g14540
Nbe.v1.1.chr19:89515068-89517546
-
Niben101Scf01841g01019.1
RNA-binding CRS1 / YhbY (CRM) domain protein
NULL
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g12900
Nbe.v1.1.chr12g12900.1
Nbe.v1.s00070g12900
Nbe.v1.1.chr12:96423615-96424022
+
Myosin heavy chain-related protein
Myosin heavy chain-related protein
Nbe.v1.1.chr12g18500
Nbe.v1.1.chr12g18500.1
Nbe.v1.s00070g18500
Nbe.v1.1.chr12:77064478-77068302
+
Niben101Scf10712g00020.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g33980
Nbe.v1.1.chr12g33980.1
Nbe.v1.s00070g33980
Nbe.v1.1.chr12:31692657-31699746
+
Niben101Scf03009g00001.1
Chaperone DnaJ-domain superfamily protein
Chaperone DnaJ-domain superfamily protein
Nbe.v1.1.chr08g16450
Nbe.v1.1.chr08g16450.1
Nbe.v1.s00080g16450
Nbe.v1.1.chr08:57252722-57254047
+
hypothetical protein (DUF3741)
NULL
Nbe.v1.1.chr02g11630
Nbe.v1.1.chr02g11630.1
Nbe.v1.s00090g11630
Nbe.v1.1.chr02:118251154-118251411
+
F-box/kelch-repeat protein
NULL
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr07g05860
Nbe.v1.1.chr07g05860.1
Nbe.v1.s00100g05860
Nbe.v1.1.chr07:122073513-122083556
-
Niben101Scf02470g01008.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr07g14980
Nbe.v1.1.chr07g14980.1
Nbe.v1.s00100g14980
Nbe.v1.1.chr07:79618571-79639308
+
Niben101Scf05767g08017.1
Spc97 / Spc98 family of spindle pole body (SBP) component
Spc97 / Spc98 family of spindle pole body (SBP) component
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g18430
Nbe.v1.1.chr13g18430.1
Nbe.v1.s00120g18430
Nbe.v1.1.chr13:57474965-57477031
+
Niben101Scf02955g04004.1
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35110
Nbe.v1.1.chr14g35110.1
Nbe.v1.s00140g35110
Nbe.v1.1.chr14:21395867-21396745
-
Niben101Scf07030g05008.1
diphthamide synthesis DPH2 family protein
diphthamide synthesis DPH2 family protein
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g40340
Nbe.v1.1.chr03g40340.1
Nbe.v1.s00150g40340
Nbe.v1.1.chr03:123643316-123653787
+
Niben101Scf00725g03012.1
histone deacetylase 15
histone deacetylase 15
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr16g28490
Nbe.v1.1.chr16g28490.1
Nbe.v1.s00180g28490
Nbe.v1.1.chr16:171645333-171659252
+
Niben101Scf07668g00033.1
alpha/beta hydrolase family protein
NULL
Nbe.v1.1.chr16g30070
Nbe.v1.1.chr16g30070.1
Nbe.v1.s00180g30070
Nbe.v1.1.chr16:177032368-177040290
+
Niben101Scf11773g01003.1
NAC domain containing protein 74
NAC domain containing protein 74
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g48180
Nbe.v1.1.chr15g48180.1
Nbe.v1.s00210g15830
Nbe.v1.1.chr15:8133022-8146075
+
Niben101Scf04767g00007.1
Kinesin motor family protein
Kinesin motor family protein