N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 74

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g13100
Nbe.v1.1.chr17g13100.1
Nbe.v1.s00010g13100
Nbe.v1.1.chr17:146958985-146967434
-
Niben101Scf02497g02012.1
NAD(P)-binding Rossmann-fold superfamily protein
NAD(P)-binding Rossmann-fold superfamily protein
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr06g00130
Nbe.v1.1.chr06g00130.1
Nbe.v1.s00020g00130
Nbe.v1.1.chr06:149937808-149941543
-
Niben101Scf06004g00024.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr06g00160
Nbe.v1.1.chr06g00160.1
Nbe.v1.s00020g00160
Nbe.v1.1.chr06:149893108-149894745
-
Niben101Scf01658g02010.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr06g00700
Nbe.v1.1.chr06g00700.1
Nbe.v1.s00020g00700
Nbe.v1.1.chr06:148627611-148628824
+
Niben101Scf06081g01014.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr06g01130
Nbe.v1.1.chr06g01130.1
Nbe.v1.s00020g01130
Nbe.v1.1.chr06:147854714-147855943
-
Niben101Scf06004g00029.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr06g01170
Nbe.v1.1.chr06g01170.1
Nbe.v1.s00020g01170
Nbe.v1.1.chr06:147799355-147801826
-
Niben101Scf00851g06039.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr06g01190
Nbe.v1.1.chr06g01190.1
Nbe.v1.s00020g01190
Nbe.v1.1.chr06:147787836-147793100
-
Niben101Scf00851g06039.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr06g01610
Nbe.v1.1.chr06g01610.1
Nbe.v1.s00020g01610
Nbe.v1.1.chr06:146869855-146872565
+
Niben101Scf06004g00024.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr06g32380
Nbe.v1.1.chr06g32380.1
Nbe.v1.s00020g32380
Nbe.v1.1.chr06:36451922-36455055
-
Niben101Scf00572g00003.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g02390
Nbe.v1.1.chr09g02390.1
Nbe.v1.s00040g02390
Nbe.v1.1.chr09:140008669-140013571
+
Niben101Scf01999g05003.1
HVA22 homologue A
NULL
Nbe.v1.1.chr09g02400
Nbe.v1.1.chr09g02400.1
Nbe.v1.s00040g02400
Nbe.v1.1.chr09:139966098-139970707
+
Niben101Scf01999g05004.1
RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-binding (RRM/RBD/RNP motifs) family protein
Nbe.v1.1.chr09g16300
Nbe.v1.1.chr09g16300.1
Nbe.v1.s00040g16300
Nbe.v1.1.chr09:91297765-91299543
-
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
NULL
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g28960
Nbe.v1.1.chr09g28960.1
Nbe.v1.s00040g28960
Nbe.v1.1.chr09:51944566-51946151
-
Niben101Scf02736g02003.1
evolutionarily conserved C-terminal region 1
evolutionarily conserved C-terminal region 1
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g26260
Nbe.v1.1.chr10g26260.1
Nbe.v1.s00050g26260
Nbe.v1.1.chr10:88197543-88202195
-
Niben101Scf05202g00004.1
cysteine-rich RECEPTOR-like kinase
NULL
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g21340
Nbe.v1.1.chr19g21340.1
Nbe.v1.s00060g21340
Nbe.v1.1.chr19:66298675-66299127
-
GroES-like zinc-binding alcohol dehydrogenase family protein
NULL
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g25160
Nbe.v1.1.chr19g25160.1
Nbe.v1.s00060g25160
Nbe.v1.1.chr19:51279946-51282304
-
Niben101Scf00572g00003.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr19g27040
Nbe.v1.1.chr19g27040.1
Nbe.v1.s00060g27040
Nbe.v1.1.chr19:46886136-46896787
-
Niben101Scf04495g00027.1
F-box and associated interaction domains-containing protein
F-box and associated interaction domains-containing protein
Nbe.v1.1.chr19g38500
Nbe.v1.1.chr19g38500.1
Nbe.v1.s00060g38500
Nbe.v1.1.chr19:18904896-18906606
+
Niben101Scf10545g00006.1
transmembrane protein%2C putative (DUF247)
Plant protein of unknown function (DUF247)
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g00670
Nbe.v1.1.chr12g00670.1
Nbe.v1.s00070g00670
Nbe.v1.1.chr12:142159514-142160940
-
Niben101Scf05167g00005.1
threonine aldolase 1
threonine aldolase 1
Nbe.v1.1.chr12g24250
Nbe.v1.1.chr12g24250.1
Nbe.v1.s00070g24250
Nbe.v1.1.chr12:60002673-60006138
-
Mechanosensitive ion channel protein
Mechanosensitive ion channel protein
Nbe.v1.1.chr12g35410
Nbe.v1.1.chr12g35410.1
Nbe.v1.s00070g35410
Nbe.v1.1.chr12:27361307-27368151
-
Niben101Scf02446g00025.1
gamma carbonic anhydrase 1
gamma carbonic anhydrase 1
Nbe.v1.1.chr12g35670
Nbe.v1.1.chr12g35670.1
Nbe.v1.s00070g35670
Nbe.v1.1.chr12:26944691-26957753
+
Niben101Scf02864g03013.1
FAD-linked oxidases family protein
FAD-linked oxidases family protein
Nbe.v1.1.chr02g04210
Nbe.v1.1.chr02g04210.1
Nbe.v1.s00090g04210
Nbe.v1.1.chr02:134519886-134520119
+
Niben101Scf05761g01024.1
dual specificity protein phosphatase family protein
dual specificity protein phosphatase family protein
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g26590
Nbe.v1.1.chr02g26590.1
Nbe.v1.s00090g26590
Nbe.v1.1.chr02:76423834-76431014
-
Niben101Scf08194g02006.1
gamma carbonic anhydrase 1
gamma carbonic anhydrase 1
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g23270
Nbe.v1.1.chr07g23270.1
Nbe.v1.s00100g23270
Nbe.v1.1.chr07:52284090-52285010
-
Niben101Scf06778g07009.1
Thiolase family protein
Thiolase family protein
Nbe.v1.1.chr07g34750
Nbe.v1.1.chr07g34750.1
Nbe.v1.s00100g34750
Nbe.v1.1.chr07:10070707-10075289
-
Niben101Scf01062g06003.1
26S proteasome regulatory subunit
26S proteasome regulatory subunit, putative
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g19980
Nbe.v1.1.chr18g19980.1
Nbe.v1.s00110g19980
Nbe.v1.1.chr18:73787488-73788114
+
zinc knuckle (CCHC-type) family protein
NULL
Nbe.v1.1.chr18g27800
Nbe.v1.1.chr18g27800.1
Nbe.v1.s00110g27800
Nbe.v1.1.chr18:46918023-46926652
-
Niben101Scf01537g04013.1
heat-inducible transcription repressor
NULL
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g22560
Nbe.v1.1.chr13g22560.1
Nbe.v1.s00120g22560
Nbe.v1.1.chr13:69839379-69848822
+
Niben101Scf05154g01005.1
Glycogen/starch synthases%2C ADP-glucose type
Glycogen/starch synthases, ADP-glucose type
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr04g33260
Nbe.v1.1.chr04g33260.1
Nbe.v1.s00130g33260
Nbe.v1.1.chr04:5249398-5252365
-
Niben101Scf06004g00029.1
RNA processing FACTOR
ATP binding;nucleic acid binding;helicases
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g24790
Nbe.v1.1.chr14g24790.1
Nbe.v1.s00140g24790
Nbe.v1.1.chr14:52672902-52674931
+
Niben101Scf05048g00010.1
high cyclic electron flow 1
high cyclic electron flow 1
Nbe.v1.1.chr14g27950
Nbe.v1.1.chr14g27950.1
Nbe.v1.s00140g27950
Nbe.v1.1.chr14:43213561-43215459
+
Niben101Scf14041g01016.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr16g22010
Nbe.v1.1.chr16g22010.1
Nbe.v1.s00180g22010
Nbe.v1.1.chr16:151959159-151960023
+
Niben101Scf03325g01001.1
8-amino-7-oxononanoate synthase
NULL
Nbe.v1.1.chr15g09540
Nbe.v1.1.chr15g09540.1
Nbe.v1.s00190g09540
Nbe.v1.1.chr15:145405296-145410174
-
Niben101Scf11360g00009.1
No description
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g38680
Nbe.v1.1.chr15g38680.1
Nbe.v1.s00210g06330
Nbe.v1.1.chr15:45896050-45897546
-
Niben101Scf04072g01001.1
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain