N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 70

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g05730
Nbe.v1.1.chr17g05730.1
Nbe.v1.s00010g05730
Nbe.v1.1.chr17:170089877-170092374
+
Niben101Scf13332g00003.1
Ubiquitin carboxyl-terminal hydrolase family protein
Ubiquitin carboxyl-terminal hydrolase family protein
Nbe.v1.1.chr17g22020
Nbe.v1.1.chr17g22020.1
Nbe.v1.s00010g22020
Nbe.v1.1.chr17:110796657-110798114
-
Niben101Scf01337g06006.1
HXXXD-type acyl-transferase family protein
HXXXD-type acyl-transferase family protein
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g40220
Nbe.v1.1.chr17g40220.1
Nbe.v1.s00010g40220
Nbe.v1.1.chr17:43021291-43024763
+
Niben101Scf01777g00009.1
Mitochondrial substrate carrier family protein
Mitochondrial substrate carrier family protein
Nbe.v1.1.chr06g04890
Nbe.v1.1.chr06g04890.1
Nbe.v1.s00020g04890
Nbe.v1.1.chr06:137061421-137106146
+
Niben101Scf09610g00015.1
ubiquitin-specific protease 12
ubiquitin-specific protease 12
Nbe.v1.1.chr06g18930
Nbe.v1.1.chr06g18930.1
Nbe.v1.s00020g18930
Nbe.v1.1.chr06:86276690-86282591
-
Niben101Scf01520g08013.1
RING-H2 group F1A
RING-H2 group F1A
Nbe.v1.1.chr06g23180
Nbe.v1.1.chr06g23180.1
Nbe.v1.s00020g23180
Nbe.v1.1.chr06:70224529-70234510
+
Niben101Scf02563g04003.1
roline-rich extensin-like receptor kinase 4
NULL
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr06g42120
Nbe.v1.1.chr06g42120.1
Nbe.v1.s00020g42120
Nbe.v1.1.chr06:1740704-1741840
+
Niben101Scf00797g17003.1
SRP72 RNA-binding domain-containing protein
SRP72 RNA-binding domain
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g12500
Nbe.v1.1.chr05g12500.1
Nbe.v1.s00030g12500
Nbe.v1.1.chr05:42344027-42348617
+
Niben101Scf08758g02003.1
breast cancer susceptibility1
breast cancer susceptibility1
Nbe.v1.1.chr05g34430
Nbe.v1.1.chr05g34430.1
Nbe.v1.s00030g34430
Nbe.v1.1.chr05:124948736-124951919
-
Niben101Scf00258g02013.1
ATP-dependent RNA helicase
ATP-dependent RNA helicase, mitochondrial, putative
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g09670
Nbe.v1.1.chr09g09670.1
Nbe.v1.s00040g09670
Nbe.v1.1.chr09:115864199-115871771
+
Niben101Scf03671g02001.1
RING-H2 group F1A
RING-H2 group F1A
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g01820
Nbe.v1.1.chr10g01820.1
Nbe.v1.s00050g01820
Nbe.v1.1.chr10:4905413-4907191
+
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g00660
Nbe.v1.1.chr19g00660.1
Nbe.v1.s00060g00660
Nbe.v1.1.chr19:141548929-141566625
-
Niben101Scf02895g01003.1
Root hair defective 3 GTP-binding protein (RHD3)
Root hair defective 3 GTP-binding protein (RHD3)
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g30520
Nbe.v1.1.chr19g30520.1
Nbe.v1.s00060g30520
Nbe.v1.1.chr19:38742354-38746114
-
Niben101Scf02585g00006.1
zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr08g01300
Nbe.v1.1.chr08g01300.1
Nbe.v1.s00080g01300
Nbe.v1.1.chr08:3826564-3835001
+
Niben101Scf03483g00002.1
Plant L-ascorbate oxidase
Plant L-ascorbate oxidase
Nbe.v1.1.chr02g01330
Nbe.v1.1.chr02g01330.1
Nbe.v1.s00090g01330
Nbe.v1.1.chr02:140359346-140367442
-
Niben101Scf00046g01019.1
MATE efflux family protein
MATE efflux family protein
Nbe.v1.1.chr02g01580
Nbe.v1.1.chr02g01580.1
Nbe.v1.s00090g01580
Nbe.v1.1.chr02:139835163-139839481
+
Niben101Scf02585g00006.1
zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g37950
Nbe.v1.1.chr02g37950.1
Nbe.v1.s00090g37950
Nbe.v1.1.chr02:27761034-27762648
-
No description
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g20440
Nbe.v1.1.chr18g20440.1
Nbe.v1.s00110g20440
Nbe.v1.1.chr18:72176179-72176865
+
myosin heavy chain-like protein
NULL
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g21850
Nbe.v1.1.chr13g21850.1
Nbe.v1.s00120g21850
Nbe.v1.1.chr13:67791756-67797996
+
Niben101Scf02511g06008.1
Purple acid phosphatases superfamily protein
Purple acid phosphatases superfamily protein
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr13g47190
Nbe.v1.1.chr13g47190.1
Nbe.v1.s00120g47190
Nbe.v1.1.chr13:135740099-135743515
-
Niben101Scf00542g05008.1
ATP-dependent RNA helicase
ATP-dependent RNA helicase, mitochondrial, putative
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g14170
Nbe.v1.1.chr04g14170.1
Nbe.v1.s00130g14170
Nbe.v1.1.chr04:68714679-68716072
+
QWRF motif protein (DUF566)
Family of unknown function (DUF566)
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr04g27370
Nbe.v1.1.chr04g27370.1
Nbe.v1.s00130g27370
Nbe.v1.1.chr04:22215126-22219726
+
Niben101Scf02192g01016.1
Vps51/Vps67 family (components of vesicular transport) protein
Vps51/Vps67 family (components of vesicular transport) protein
Nbe.v1.1.chr14g08670
Nbe.v1.1.chr14g08670.1
Nbe.v1.s00140g08670
Nbe.v1.1.chr14:102898089-102916796
-
Niben101Scf02597g04001.1
histone-lysine N-methyltransferase
histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g15590
Nbe.v1.1.chr14g15590.1
Nbe.v1.s00140g15590
Nbe.v1.1.chr14:79147589-79153835
-
Niben101Scf04388g00011.1
magnesium-chelatase subunit chlH%2C chloroplast%2C putative / Mg-protoporphyrin IX chelatase%2C putative (CHLH)
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Nbe.v1.1.chr14g15620
Nbe.v1.1.chr14g15620.1
Nbe.v1.s00140g15620
Nbe.v1.1.chr14:79077245-79101192
+
Niben101Scf10289g00006.1
Insulinase (Peptidase family M16) family protein
Insulinase (Peptidase family M16) family protein
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g38570
Nbe.v1.1.chr01g38570.1
Nbe.v1.s00160g38570
Nbe.v1.1.chr01:16341745-16354010
+
Niben101Scf03599g01017.1
cytidinediphosphate diacylglycerol synthase 4
cytidinediphosphate diacylglycerol synthase 4
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr16g02630
Nbe.v1.1.chr16g02630.1
Nbe.v1.s00180g02630
Nbe.v1.1.chr16:77215827-77226336
-
Niben101Scf02939g01003.1
MOS4-associated complex 3A
MOS4-associated complex 3A
Nbe.v1.1.chr16g03200
Nbe.v1.1.chr16g03200.1
Nbe.v1.s00180g03200
Nbe.v1.1.chr16:78992507-78996296
+
Niben101Scf01922g11013.1
beta-amylase 1
beta-amylase 1
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g15420
Nbe.v1.1.chr15g15420.1
Nbe.v1.s00190g15420
Nbe.v1.1.chr15:127794714-127794965
+
Cation transporter/ E1-E2 ATPase family protein
Cation transporter/ E1-E2 ATPase family protein
Nbe.v1.1.chr16g42730
Nbe.v1.1.chr16g42730.1
Nbe.v1.s00200g11320
Nbe.v1.1.chr16:30029754-30030644
-
phytosulfokine 5 precursor
phytosulfokine 5 precursor
Nbe.v1.1.chr16g46650
Nbe.v1.1.chr16g46650.1
Nbe.v1.s00200g15240
Nbe.v1.1.chr16:43143495-43145738
+
Niben101Scf01577g00006.1
Vps51/Vps67 family (components of vesicular transport) protein
Vps51/Vps67 family (components of vesicular transport) protein