N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 73

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g04210
Nbe.v1.1.chr17g04210.1
Nbe.v1.s00010g04210
Nbe.v1.1.chr17:174651753-174653186
+
Niben101Scf05348g02002.1
MATE efflux family protein
MATE efflux family protein
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g08960
Nbe.v1.1.chr17g08960.1
Nbe.v1.s00010g08960
Nbe.v1.1.chr17:160858146-160864556
-
Niben101Scf05038g00009.1
MAR-binding filament-like protein
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g40470
Nbe.v1.1.chr17g40470.1
Nbe.v1.s00010g40470
Nbe.v1.1.chr17:42009139-42009489
-
EXS (ERD1/XPR1/SYG1) family protein
EXS (ERD1/XPR1/SYG1) family protein
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g11290
Nbe.v1.1.chr05g11290.1
Nbe.v1.s00030g11290
Nbe.v1.1.chr05:38261221-38261706
+
Aminotransferase-like%2C plant mobile domain family protein
NULL
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g02860
Nbe.v1.1.chr09g02860.1
Nbe.v1.s00040g02860
Nbe.v1.1.chr09:138818293-138818592
+
ROTUNDIFOLIA like 15
ROTUNDIFOLIA like 15
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g20610
Nbe.v1.1.chr09g20610.1
Nbe.v1.s00040g20610
Nbe.v1.1.chr09:79093815-79094294
+
Niben101Scf02223g00003.1
hypothetical protein
NULL
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g33670
Nbe.v1.1.chr09g33670.1
Nbe.v1.s00040g33670
Nbe.v1.1.chr09:35270901-35271218
+
trehalose-6-phosphatase synthase S4
NULL
Nbe.v1.1.chr10g09150
Nbe.v1.1.chr10g09150.1
Nbe.v1.s00050g09150
Nbe.v1.1.chr10:28935312-28951819
-
Niben101Scf04487g06016.1
high chlorophyll fluorescent 109
high chlorophyll fluorescent 109
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g38500
Nbe.v1.1.chr10g38500.1
Nbe.v1.s00050g38500
Nbe.v1.1.chr10:130834178-130835611
-
Niben101Scf05348g02002.1
MATE efflux family protein
MATE efflux family protein
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g08700
Nbe.v1.1.chr19g08700.1
Nbe.v1.s00060g08700
Nbe.v1.1.chr19:110720726-110728911
+
Niben101Scf03414g02002.1
phosphate transporter 4%3B1
phosphate transporter 4;1
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g34060
Nbe.v1.1.chr19g34060.1
Nbe.v1.s00060g34060
Nbe.v1.1.chr19:30023365-30024808
-
Ataxia telangiectasia-mutated and RAD3-like protein
NULL
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g17840
Nbe.v1.1.chr12g17840.1
Nbe.v1.s00070g17840
Nbe.v1.1.chr12:78940514-78940882
-
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr08g09980
Nbe.v1.1.chr08g09980.1
Nbe.v1.s00080g09980
Nbe.v1.1.chr08:35422826-35435798
+
Niben101Scf11123g00030.1
cyclic nucleotide-gated channel 17
cyclic nucleotide-gated channel 17
Nbe.v1.1.chr08g33470
Nbe.v1.1.chr08g33470.1
Nbe.v1.s00080g33470
Nbe.v1.1.chr08:121296934-121299588
-
Niben101Scf04772g00009.1
pentatricopeptide (PPR) repeat-containing protein
pentatricopeptide (PPR) repeat-containing protein
Nbe.v1.1.chr08g34490
Nbe.v1.1.chr08g34490.1
Nbe.v1.s00080g34490
Nbe.v1.1.chr08:124718323-124718664
-
Niben101Scf15364g00008.1
Pentatricopeptide repeat (PPR) superfamily protein
NULL
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g29230
Nbe.v1.1.chr07g29230.1
Nbe.v1.s00100g29230
Nbe.v1.1.chr07:29144061-29145416
+
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
NULL
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr13g00660
Nbe.v1.1.chr13g00660.1
Nbe.v1.s00120g00660
Nbe.v1.1.chr13:1893736-1910347
-
Niben101Scf11123g00030.1
cyclic nucleotide-gated channel 17
cyclic nucleotide-gated channel 17
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g26840
Nbe.v1.1.chr13g26840.1
Nbe.v1.s00120g26840
Nbe.v1.1.chr13:80413623-80414747
+
Niben101Scf00338g06028.1
No description
Nbe.v1.1.chr13g31820
Nbe.v1.1.chr13g31820.1
Nbe.v1.s00120g31820
Nbe.v1.1.chr13:91747728-91753863
+
Niben101Scf07741g05001.1
Ubiquitin-specific protease family C19-related protein
Ubiquitin-specific protease family C19-related protein
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr13g46400
Nbe.v1.1.chr13g46400.1
Nbe.v1.s00120g46400
Nbe.v1.1.chr13:133317843-133318208
+
Homeodomain-like/winged-helix DNA-binding family protein
Homeodomain-like/winged-helix DNA-binding family protein
Nbe.v1.1.chr04g11620
Nbe.v1.1.chr04g11620.1
Nbe.v1.s00130g11620
Nbe.v1.1.chr04:78689903-78692441
-
Niben101Scf03560g00003.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g44260
Nbe.v1.1.chr03g44260.1
Nbe.v1.s00150g44260
Nbe.v1.1.chr03:131883997-131891629
-
Niben101Scf07741g05001.1
Ubiquitin-specific protease family C19-related protein
Ubiquitin-specific protease family C19-related protein
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g31210
Nbe.v1.1.chr01g31210.1
Nbe.v1.s00160g31210
Nbe.v1.1.chr01:33960383-34006925
-
Niben101Scf09234g03025.1
Trimeric LpxA-like enzyme
Trimeric LpxA-like enzyme
Nbe.v1.1.chr01g33090
Nbe.v1.1.chr01g33090.1
Nbe.v1.s00160g33090
Nbe.v1.1.chr01:29900275-29901855
-
Niben101Scf01102g01007.1
Pentatricopeptide repeat (PPR-like) superfamily protein
Pentatricopeptide repeat (PPR-like) superfamily protein
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g12760
Nbe.v1.1.chr11g12760.1
Nbe.v1.s00170g12760
Nbe.v1.1.chr11:95705122-95733352
+
Niben101Scf09234g03025.1
Trimeric LpxA-like enzyme
Trimeric LpxA-like enzyme
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr16g02140
Nbe.v1.1.chr16g02140.1
Nbe.v1.s00180g02140
Nbe.v1.1.chr16:75587390-75588815
-
No description
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g23780
Nbe.v1.1.chr15g23780.1
Nbe.v1.s00190g23780
Nbe.v1.1.chr15:95591632-95601461
-
Niben101Scf04103g11001.1
K+ transporter 1
K+ transporter 1
Nbe.v1.1.chr16g35170
Nbe.v1.1.chr16g35170.1
Nbe.v1.s00200g03760
Nbe.v1.1.chr16:9377040-9379532
-
Niben101Scf02790g05011.1
TATA-binding related factor (TRF) of subunit 20 of Mediator complex
NULL
Nbe.v1.1.chr16g40300
Nbe.v1.1.chr16g40300.1
Nbe.v1.s00200g08890
Nbe.v1.1.chr16:23448805-23461885
-
Niben101Scf07008g03009.1
Chaperone DnaJ-domain superfamily protein
Chaperone DnaJ-domain superfamily protein
Nbe.v1.1.chr15g44070
Nbe.v1.1.chr15g44070.1
Nbe.v1.s00210g11720
Nbe.v1.1.chr15:22470427-22476789
-
Niben101Scf02711g00003.1
histidine kinase 3
histidine kinase 3