N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 75

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g27300
Nbe.v1.1.chr17g27300.1
Nbe.v1.s00010g27300
Nbe.v1.1.chr17:92845303-92845884
+
Niben101Scf01765g02005.1
multidrug resistance-associated protein 10
multidrug resistance-associated protein 10
Nbe.v1.1.chr17g33340
Nbe.v1.1.chr17g33340.1
Nbe.v1.s00010g33340
Nbe.v1.1.chr17:71232026-71250746
-
Niben101Scf03302g03005.1
ATP-dependent helicase family protein
ATP-dependent helicase family protein
Nbe.v1.1.chr06g06720
Nbe.v1.1.chr06g06720.1
Nbe.v1.s00020g06720
Nbe.v1.1.chr06:131799869-131820122
-
Niben101Scf14477g01006.1
CLIP-associated protein
CLIP-associated protein
Nbe.v1.1.chr06g08190
Nbe.v1.1.chr06g08190.1
Nbe.v1.s00020g08190
Nbe.v1.1.chr06:126143329-126147461
+
Niben101Scf13371g00003.1
phosphoserine aminotransferase%2C putative (DUF760)
Protein of unknown function (DUF760)
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g11490
Nbe.v1.1.chr05g11490.1
Nbe.v1.s00030g11490
Nbe.v1.1.chr05:38946426-38949270
-
Niben101Scf09248g07003.1
stress response NST1-like protein
NULL
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g20360
Nbe.v1.1.chr09g20360.1
Nbe.v1.s00040g20360
Nbe.v1.1.chr09:80102827-80103691
-
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g20250
Nbe.v1.1.chr19g20250.1
Nbe.v1.s00060g20250
Nbe.v1.1.chr19:70239005-70247633
-
Niben101Scf09248g07003.1
Serine/Threonine kinase domain protein
STT7 homolog STN7
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g43190
Nbe.v1.1.chr12g43190.1
Nbe.v1.s00070g43190
Nbe.v1.1.chr12:3845330-3861100
+
Niben101Scf03934g05001.1
CLIP-associated protein
CLIP-associated protein
Nbe.v1.1.chr08g04670
Nbe.v1.1.chr08g04670.1
Nbe.v1.s00080g04670
Nbe.v1.1.chr08:14666163-14667980
+
Niben101Scf12868g00008.1
heat shock protein 70
heat shock protein 70
Nbe.v1.1.chr08g09150
Nbe.v1.1.chr08g09150.1
Nbe.v1.s00080g09150
Nbe.v1.1.chr08:32778550-32790074
-
Niben101Scf03736g00004.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr08g36210
Nbe.v1.1.chr08g36210.1
Nbe.v1.s00080g36210
Nbe.v1.1.chr08:130653309-130654994
+
Niben101Scf00219g04008.1
Leucine-rich repeat (LRR) family protein
Leucine-rich repeat (LRR) family protein
Nbe.v1.1.chr02g14540
Nbe.v1.1.chr02g14540.1
Nbe.v1.s00090g14540
Nbe.v1.1.chr02:111858764-111859162
+
Aminotransferase-like%2C plant mobile domain family protein
NULL
Nbe.v1.1.chr02g15050
Nbe.v1.1.chr02g15050.1
Nbe.v1.s00090g15050
Nbe.v1.1.chr02:110658712-110667372
-
Niben101Scf02041g03005.1
ubiquitin family protein
ubiquitin family protein
Nbe.v1.1.chr02g17850
Nbe.v1.1.chr02g17850.1
Nbe.v1.s00090g17850
Nbe.v1.1.chr02:103976670-103978484
-
Niben101Scf03693g01007.1
GRAS family transcription factor
GRAS family transcription factor
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g25180
Nbe.v1.1.chr02g25180.1
Nbe.v1.s00090g25180
Nbe.v1.1.chr02:81106761-81107312
-
Niben101Scf01323g04002.1
RNA ligase/cyclic nucleotide phosphodiesterase family protein
RNA ligase/cyclic nucleotide phosphodiesterase family protein
Nbe.v1.1.chr02g29300
Nbe.v1.1.chr02g29300.1
Nbe.v1.s00090g29300
Nbe.v1.1.chr02:67415412-67433697
+
Niben101Scf04206g03009.1
CLIP-associated protein
CLIP-associated protein
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g26050
Nbe.v1.1.chr07g26050.1
Nbe.v1.s00100g26050
Nbe.v1.1.chr07:40744858-40748608
+
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr18g06930
Nbe.v1.1.chr18g06930.1
Nbe.v1.s00110g06930
Nbe.v1.1.chr18:120398659-120400253
+
Niben101Scf01037g02006.1
Peroxidase superfamily protein
Peroxidase superfamily protein
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g17580
Nbe.v1.1.chr18g17580.1
Nbe.v1.s00110g17580
Nbe.v1.1.chr18:82511810-82513432
+
Niben101Scf00219g04008.1
Leucine-rich repeat (LRR) family protein
Leucine-rich repeat (LRR) family protein
Nbe.v1.1.chr18g41960
Nbe.v1.1.chr18g41960.1
Nbe.v1.s00110g41960
Nbe.v1.1.chr18:605299-606571
+
Niben101Scf05434g02020.1
serine carboxypeptidase-like 50
serine carboxypeptidase-like 50
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g24450
Nbe.v1.1.chr13g24450.1
Nbe.v1.s00120g24450
Nbe.v1.1.chr13:74395781-74401253
-
Niben101Scf01063g05019.1
AAA-type ATPase family protein
AAA-type ATPase family protein
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g08630
Nbe.v1.1.chr04g08630.1
Nbe.v1.s00130g08630
Nbe.v1.1.chr04:91997485-92008618
+
Niben101Scf19423g00012.1
plant glycogenin-like starch initiation protein 3
NULL
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g16210
Nbe.v1.1.chr04g16210.1
Nbe.v1.s00130g16210
Nbe.v1.1.chr04:61540883-61541356
+
sarcolemmal membrane-associated protein
NULL
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g27620
Nbe.v1.1.chr14g27620.1
Nbe.v1.s00140g27620
Nbe.v1.1.chr14:44198423-44211009
+
Niben101Scf02197g04007.1
SWITCH/sucrose nonfermenting 3C
SWITCH/sucrose nonfermenting 3C
Nbe.v1.1.chr14g34330
Nbe.v1.1.chr14g34330.1
Nbe.v1.s00140g34330
Nbe.v1.1.chr14:24055735-24062904
-
Niben101Scf15496g01011.1
SU(VAR)3-9 homolog 5
NULL
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g28000
Nbe.v1.1.chr01g28000.1
Nbe.v1.s00160g28000
Nbe.v1.1.chr01:40799577-40808265
-
Niben101Scf00466g04035.1
lipoamide dehydrogenase 1
lipoamide dehydrogenase 1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g06010
Nbe.v1.1.chr11g06010.1
Nbe.v1.s00170g06010
Nbe.v1.1.chr11:114747490-114769861
-
Niben101Scf01773g03003.1
Transducin family protein / WD-40 repeat family protein
Transducin family protein / WD-40 repeat family protein
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g16570
Nbe.v1.1.chr11g16570.1
Nbe.v1.s00170g16570
Nbe.v1.1.chr11:86963936-86970872
+
Niben101Scf00466g04035.1
lipoamide dehydrogenase 1
lipoamide dehydrogenase 1
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g23070
Nbe.v1.1.chr11g23070.1
Nbe.v1.s00170g23070
Nbe.v1.1.chr11:69201230-69203005
+
Niben101Scf02406g04026.1
Leucine-rich repeat (LRR) family protein
Leucine-rich repeat (LRR) family protein
Nbe.v1.1.chr16g08370
Nbe.v1.1.chr16g08370.1
Nbe.v1.s00180g08370
Nbe.v1.1.chr16:98757628-98759761
+
Niben101Scf03840g02005.1
nucleolin
NULL
Nbe.v1.1.chr16g15500
Nbe.v1.1.chr16g15500.1
Nbe.v1.s00180g15500
Nbe.v1.1.chr16:126570238-126578361
-
Niben101Scf30252g01011.1
GYF domain-containing protein
GYF domain-containing protein
Nbe.v1.1.chr16g29230
Nbe.v1.1.chr16g29230.1
Nbe.v1.s00180g29230
Nbe.v1.1.chr16:174363462-174380827
-
Niben101Scf14477g01006.1
CLIP-associated protein
CLIP-associated protein
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g43510
Nbe.v1.1.chr15g43510.1
Nbe.v1.s00210g11160
Nbe.v1.1.chr15:25553508-25561618
-
Niben101Scf02007g07005.1
GYF domain-containing protein
GYF domain-containing protein