N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 66

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g29620
Nbe.v1.1.chr17g29620.1
Nbe.v1.s00010g29620
Nbe.v1.1.chr17:85800077-85807655
-
Niben101Scf03250g00007.1
SEUSS-like 2
NULL
Nbe.v1.1.chr17g48860
Nbe.v1.1.chr17g48860.1
Nbe.v1.s00010g48860
Nbe.v1.1.chr17:10630504-10631374
-
Ribosomal protein S5 domain 2-like superfamily protein
Ribosomal protein S5 domain 2-like superfamily protein
Nbe.v1.1.chr06g10280
Nbe.v1.1.chr06g10280.1
Nbe.v1.s00020g10280
Nbe.v1.1.chr06:118536254-118536583
-
No description
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g17700
Nbe.v1.1.chr09g17700.1
Nbe.v1.s00040g17700
Nbe.v1.1.chr09:87255441-87256082
-
Niben101Scf06248g01001.1
1-phosphatidylinositol-4-phosphate 5-kinase 3
1-phosphatidylinositol-4-phosphate 5-kinase 3
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41070
Nbe.v1.1.chr10g41070.1
Nbe.v1.s00050g41070
Nbe.v1.1.chr10:139882851-139885963
-
Niben101Scf10840g00002.1
Cellulase (glycosyl hydrolase family 5) protein
Cellulase (glycosyl hydrolase family 5) protein
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g17370
Nbe.v1.1.chr19g17370.1
Nbe.v1.s00060g17370
Nbe.v1.1.chr19:81177662-81181490
+
Niben101Scf00348g01012.1
Leucine-rich repeat transmembrane protein kinase
Leucine-rich repeat transmembrane protein kinase
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g00940
Nbe.v1.1.chr12g00940.1
Nbe.v1.s00070g00940
Nbe.v1.1.chr12:141214298-141216442
+
Niben101Scf27793g02008.1
leucine-rich repeat/extensin 2
leucine-rich repeat/extensin 2
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr08g10370
Nbe.v1.1.chr08g10370.1
Nbe.v1.s00080g10370
Nbe.v1.1.chr08:36490071-36493293
-
Niben101Scf23606g00007.1
MATE efflux family protein
MATE efflux family protein
Nbe.v1.1.chr08g26780
Nbe.v1.1.chr08g26780.1
Nbe.v1.s00080g26780
Nbe.v1.1.chr08:96689786-96695879
-
Niben101Scf15308g00001.1
ribosomal protein L15
ribosomal protein L15
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g21410
Nbe.v1.1.chr02g21410.1
Nbe.v1.s00090g21410
Nbe.v1.1.chr02:94257825-94260659
-
Niben101Scf03766g01021.1
Major facilitator superfamily protein
Major facilitator superfamily protein
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g18120
Nbe.v1.1.chr18g18120.1
Nbe.v1.s00110g18120
Nbe.v1.1.chr18:80532583-80541836
+
No description
Nbe.v1.1.chr13g00260
Nbe.v1.1.chr13g00260.1
Nbe.v1.s00120g00260
Nbe.v1.1.chr13:690510-694911
-
Niben101Scf01409g00019.1
TRICHOME BIREFRINGENCE-LIKE 5
TRICHOME BIREFRINGENCE-LIKE 5
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g24300
Nbe.v1.1.chr14g24300.1
Nbe.v1.s00140g24300
Nbe.v1.1.chr14:54537501-54546126
+
Niben101Scf05368g02018.1
FTSH protease 10
FTSH protease 10
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g05680
Nbe.v1.1.chr03g05680.1
Nbe.v1.s00150g05680
Nbe.v1.1.chr03:19088077-19106767
-
Niben101Scf04671g06008.1
BRI1 suppressor 1 (BSU1)-like 2
BRI1 suppressor 1 (BSU1)-like 2
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g23480
Nbe.v1.1.chr03g23480.1
Nbe.v1.s00150g23480
Nbe.v1.1.chr03:84664689-84665114
-
SPT2 chromatin protein
SPT2 chromatin protein
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g20410
Nbe.v1.1.chr01g20410.1
Nbe.v1.s00160g20410
Nbe.v1.1.chr01:61059078-61062235
-
Niben101Scf02407g03014.1
FBD-like domain family protein
FBD-like domain family protein
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g34100
Nbe.v1.1.chr01g34100.1
Nbe.v1.s00160g34100
Nbe.v1.1.chr01:27157286-27173116
-
Niben101Scf05197g01015.1
AMP-dependent synthetase and ligase family protein
AMP-dependent synthetase and ligase family protein
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g25360
Nbe.v1.1.chr11g25360.1
Nbe.v1.s00170g25360
Nbe.v1.1.chr11:58753273-58760177
-
Niben101Scf14344g01016.1
trehalose-phosphatase/synthase 3
trehalose-phosphatase/synthase 3
Nbe.v1.1.chr16g23970
Nbe.v1.1.chr16g23970.1
Nbe.v1.s00180g23970
Nbe.v1.1.chr16:157220929-157222956
-
Niben101Scf01001g07015.1
F-box family protein
F-box family protein
Nbe.v1.1.chr15g09830
Nbe.v1.1.chr15g09830.1
Nbe.v1.s00190g09830
Nbe.v1.1.chr15:144346329-144357812
-
Niben101Scf01992g00007.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr16g44050
Nbe.v1.1.chr16g44050.1
Nbe.v1.s00200g12640
Nbe.v1.1.chr16:34003641-34009990
-
Niben101Scf04216g04005.1
Major facilitator superfamily protein
Major facilitator superfamily protein
Nbe.v1.1.chr15g45560
Nbe.v1.1.chr15g45560.1
Nbe.v1.s00210g13210
Nbe.v1.1.chr15:17594455-17605096
+
Niben101Scf10786g01004.1
FTSH protease 10
FTSH protease 10
Nbe.v1.1.chr15g48270
Nbe.v1.1.chr15g48270.1
Nbe.v1.s00210g15920
Nbe.v1.1.chr15:7890381-7892579
+
Niben101Scf01025g02004.1
arginine decarboxylase 2
arginine decarboxylase 2