N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 66

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g38340
Nbe.v1.1.chr17g38340.1
Nbe.v1.s00010g38340
Nbe.v1.1.chr17:48669709-48671880
+
Niben101Scf01858g00009.1
Concanavalin A-like lectin protein kinase family protein
Concanavalin A-like lectin protein kinase family protein
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g02270
Nbe.v1.1.chr09g02270.1
Nbe.v1.s00040g02270
Nbe.v1.1.chr09:140234504-140236294
-
Niben101Scf01999g07010.1
formin-like protein (DUF1005)
Protein of unknown function (DUF1005)
Nbe.v1.1.chr09g09790
Nbe.v1.1.chr09g09790.1
Nbe.v1.s00040g09790
Nbe.v1.1.chr09:115335728-115337716
+
Niben101Scf16516g00007.1
GATA zinc finger protein
NULL
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g34050
Nbe.v1.1.chr09g34050.1
Nbe.v1.s00040g34050
Nbe.v1.1.chr09:33515410-33520979
-
Niben101Scf03375g01013.1
elongation factor
NULL
Nbe.v1.1.chr10g17160
Nbe.v1.1.chr10g17160.1
Nbe.v1.s00050g17160
Nbe.v1.1.chr10:59966337-59970861
+
Niben101Scf07152g04034.1
zinc ion binding / nucleic acid binding protein
zinc ion binding;nucleic acid binding
Nbe.v1.1.chr10g18880
Nbe.v1.1.chr10g18880.1
Nbe.v1.s00050g18880
Nbe.v1.1.chr10:65429764-65430411
+
Niben101Scf01695g06006.1
ribosomal protein L7/L12 domain-containing protein
Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g39400
Nbe.v1.1.chr10g39400.1
Nbe.v1.s00050g39400
Nbe.v1.1.chr10:134382194-134391436
+
Niben101Scf02240g03015.1
multidrug resistance-associated protein 9
multidrug resistance-associated protein 9
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g03140
Nbe.v1.1.chr12g03140.1
Nbe.v1.s00070g03140
Nbe.v1.1.chr12:132064131-132065114
-
hypothetical protein
NULL
Nbe.v1.1.chr12g19470
Nbe.v1.1.chr12g19470.1
Nbe.v1.s00070g19470
Nbe.v1.1.chr12:73900168-73900815
-
Niben101Scf01695g06006.1
ribosomal protein L7/L12 domain-containing protein
Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
Nbe.v1.1.chr12g23600
Nbe.v1.1.chr12g23600.1
Nbe.v1.s00070g23600
Nbe.v1.1.chr12:62100252-62106909
+
Niben101Scf07720g00028.1
egg cell-secreted-like protein (DUF1278)
Protein of unknown function (DUF1278)
Nbe.v1.1.chr12g23890
Nbe.v1.1.chr12g23890.1
Nbe.v1.s00070g23890
Nbe.v1.1.chr12:61255161-61261423
+
No description
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g39830
Nbe.v1.1.chr12g39830.1
Nbe.v1.s00070g39830
Nbe.v1.1.chr12:13052042-13053503
-
sucrose-proton symporter 1
sucrose-proton symporter 1
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g05130
Nbe.v1.1.chr18g05130.1
Nbe.v1.s00110g05130
Nbe.v1.1.chr18:125391523-125394392
-
PIF1 helicase
PIF1 helicase
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g12990
Nbe.v1.1.chr18g12990.1
Nbe.v1.s00110g12990
Nbe.v1.1.chr18:99096376-99098053
+
hypothetical protein
NULL
Nbe.v1.1.chr18g22710
Nbe.v1.1.chr18g22710.1
Nbe.v1.s00110g22710
Nbe.v1.1.chr18:64633416-64636033
-
No description
Nbe.v1.1.chr13g04470
Nbe.v1.1.chr13g04470.1
Nbe.v1.s00120g04470
Nbe.v1.1.chr13:14685288-14687222
-
zinc ion binding / nucleic acid binding protein
zinc ion binding;nucleic acid binding
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g38010
Nbe.v1.1.chr14g38010.1
Nbe.v1.s00140g38010
Nbe.v1.1.chr14:12924153-12924446
-
cysteine-rich RLK (RECEPTOR-like protein kinase) 3
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g20320
Nbe.v1.1.chr01g20320.1
Nbe.v1.s00160g20320
Nbe.v1.1.chr01:61223793-61224797
-
Niben101Scf02407g02002.1
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g39830
Nbe.v1.1.chr11g39830.1
Nbe.v1.s00170g39830
Nbe.v1.1.chr11:9259010-9260445
+
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Nbe.v1.1.chr15g06550
Nbe.v1.1.chr15g06550.1
Nbe.v1.s00190g06550
Nbe.v1.1.chr15:156359309-156368962
-
Niben101Scf00616g01004.1
RNA polymerases M/15 Kd subunit
NULL
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g16050
Nbe.v1.1.chr15g16050.1
Nbe.v1.s00190g16050
Nbe.v1.1.chr15:125997711-126004044
+
Niben101Scf00279g01001.1
PIF1 helicase
PIF1 helicase
Nbe.v1.1.chr15g16060
Nbe.v1.1.chr15g16060.1
Nbe.v1.s00190g16060
Nbe.v1.1.chr15:125991599-125993178
+
aspartate/glutamate/uridylate kinase family protein
aspartate/glutamate/uridylate kinase family protein
Nbe.v1.1.chr16g49100
Nbe.v1.1.chr16g49100.1
Nbe.v1.s00200g17690
Nbe.v1.1.chr16:53920477-53921166
-
NagB/RpiA/CoA transferase-like superfamily protein
NagB/RpiA/CoA transferase-like superfamily protein
Nbe.v1.1.chr15g43270
Nbe.v1.1.chr15g43270.1
Nbe.v1.s00210g10920
Nbe.v1.1.chr15:26588309-26592253
-
Niben101Scf02210g03007.1
B-box type zinc finger protein with CCT domain-containing protein
B-box type zinc finger protein with CCT domain