N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 80

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g07810
Nbe.v1.1.chr17g07810.1
Nbe.v1.s00010g07810
Nbe.v1.1.chr17:164437687-164438529
-
Niben101Scf01259g10012.1
DEK carboxy-terminal domain protein
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g33000
Nbe.v1.1.chr17g33000.1
Nbe.v1.s00010g33000
Nbe.v1.1.chr17:72909526-72912365
+
myb domain protein 20
myb domain protein 20
Nbe.v1.1.chr17g48700
Nbe.v1.1.chr17g48700.1
Nbe.v1.s00010g48700
Nbe.v1.1.chr17:11287910-11288878
+
Niben101Scf00793g05001.1
reduced epidermal fluorescence 4
reduced epidermal fluorescence 4
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr06g36330
Nbe.v1.1.chr06g36330.1
Nbe.v1.s00020g36330
Nbe.v1.1.chr06:21439509-21444258
+
Niben101Scf05912g01016.1
CLPC homologue 1
CLPC homologue 1
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g04600
Nbe.v1.1.chr05g04600.1
Nbe.v1.s00030g04600
Nbe.v1.1.chr05:17510504-17514469
-
Niben101Scf05392g01018.1
Enolase
Enolase
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g01960
Nbe.v1.1.chr10g01960.1
Nbe.v1.s00050g01960
Nbe.v1.1.chr10:5111488-5117455
+
Niben101Scf00739g04033.1
RNA polymerase II transcription mediator
RNA polymerase II transcription mediators
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g25430
Nbe.v1.1.chr10g25430.1
Nbe.v1.s00050g25430
Nbe.v1.1.chr10:86179531-86184760
-
Niben101Scf01072g03006.1
ureidoglycine aminohydrolase
ureidoglycine aminohydrolase
Nbe.v1.1.chr10g32650
Nbe.v1.1.chr10g32650.1
Nbe.v1.s00050g32650
Nbe.v1.1.chr10:110810180-110845678
-
Niben101Scf00925g00005.1
ROOT GROWTH DEFECTIVE 3
DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g23770
Nbe.v1.1.chr19g23770.1
Nbe.v1.s00060g23770
Nbe.v1.1.chr19:55877987-55885444
+
Niben101Scf05912g01016.1
CLPC homologue 1
CLPC homologue 1
Nbe.v1.1.chr19g24610
Nbe.v1.1.chr19g24610.1
Nbe.v1.s00060g24610
Nbe.v1.1.chr19:52724115-52734605
-
Niben101Scf10436g00001.1
cation exchanger 2
cation exchanger 2
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g36410
Nbe.v1.1.chr19g36410.1
Nbe.v1.s00060g36410
Nbe.v1.1.chr19:24047325-24047657
-
Niben101Scf05231g01004.1
MuDR family transposase
NULL
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g06840
Nbe.v1.1.chr12g06840.1
Nbe.v1.s00070g06840
Nbe.v1.1.chr12:118308418-118309225
+
Niben101Scf15543g01002.1
LOB domain-containing protein 37
NULL
Nbe.v1.1.chr08g18110
Nbe.v1.1.chr08g18110.1
Nbe.v1.s00080g18110
Nbe.v1.1.chr08:64999405-65008008
+
Niben101Scf10441g01003.1
putrescine-binding periplasmic protein-like protein
putrescine-binding periplasmic protein-related
Nbe.v1.1.chr08g39350
Nbe.v1.1.chr08g39350.1
Nbe.v1.s00080g39350
Nbe.v1.1.chr08:141225779-141230313
-
Niben101Scf05912g01016.1
CLPC homologue 1
CLPC homologue 1
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g31610
Nbe.v1.1.chr02g31610.1
Nbe.v1.s00090g31610
Nbe.v1.1.chr02:58637827-58638602
-
Niben101Scf00991g13022.1
LOB domain-containing protein 37
NULL
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g24620
Nbe.v1.1.chr07g24620.1
Nbe.v1.s00100g24620
Nbe.v1.1.chr07:47154771-47185096
-
Niben101Scf05791g00016.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr07g26720
Nbe.v1.1.chr07g26720.1
Nbe.v1.s00100g26720
Nbe.v1.1.chr07:38862981-38864133
+
cytochrome P450%2C family 96%2C subfamily A%2C polypeptide 13
cytochrome P450, family 96, subfamily A, polypeptide 13
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g12910
Nbe.v1.1.chr18g12910.1
Nbe.v1.s00110g12910
Nbe.v1.1.chr18:99292495-99294904
+
Niben101Scf15411g00001.1
Coatomer%2C alpha subunit
Coatomer, alpha subunit
Nbe.v1.1.chr18g27840
Nbe.v1.1.chr18g27840.1
Nbe.v1.s00110g27840
Nbe.v1.1.chr18:46756665-46760196
-
Niben101Scf08874g01003.1
Leucine-rich repeat protein kinase family protein
Leucine-rich repeat protein kinase family protein
Nbe.v1.1.chr18g28090
Nbe.v1.1.chr18g28090.1
Nbe.v1.s00110g28090
Nbe.v1.1.chr18:45910884-45914075
+
Niben101Scf19533g00007.1
protein kinase 2B
protein kinase 2B
Nbe.v1.1.chr13g01280
Nbe.v1.1.chr13g01280.1
Nbe.v1.s00120g01280
Nbe.v1.1.chr13:3970291-3973786
+
Niben101Scf02359g00008.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g19390
Nbe.v1.1.chr13g19390.1
Nbe.v1.s00120g19390
Nbe.v1.1.chr13:61225426-61227693
+
Niben101Scf04096g03009.1
membrane-associated progesterone binding protein 3
membrane-associated progesterone binding protein 3
Nbe.v1.1.chr13g30810
Nbe.v1.1.chr13g30810.1
Nbe.v1.s00120g30810
Nbe.v1.1.chr13:89773201-89788771
-
Niben101Scf04654g00002.1
Putative serine esterase family protein
NULL
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12190
Nbe.v1.1.chr04g12190.1
Nbe.v1.s00130g12190
Nbe.v1.1.chr04:76284844-76289865
+
Niben101Scf00197g02006.1
Coatomer%2C alpha subunit
Coatomer, alpha subunit
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g05030
Nbe.v1.1.chr14g05030.1
Nbe.v1.s00140g05030
Nbe.v1.1.chr14:115132566-115135042
+
Niben101Scf07516g01001.1
MuDR family transposase
NULL
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g20510
Nbe.v1.1.chr14g20510.1
Nbe.v1.s00140g20510
Nbe.v1.1.chr14:66582014-66584576
+
Niben101Scf07516g01001.1
MuDR family transposase
NULL
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g07650
Nbe.v1.1.chr03g07650.1
Nbe.v1.s00150g07650
Nbe.v1.1.chr03:26112616-26119081
-
Niben101Scf07488g00028.1
NB-ARC domain-containing disease resistance protein
NB-ARC domain-containing disease resistance protein
Nbe.v1.1.chr03g10500
Nbe.v1.1.chr03g10500.1
Nbe.v1.s00150g10500
Nbe.v1.1.chr03:35003200-35004371
+
hypothetical protein
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g24040
Nbe.v1.1.chr03g24040.1
Nbe.v1.s00150g24040
Nbe.v1.1.chr03:86253055-86255078
-
Niben101Scf02266g00005.1
membrane-associated progesterone binding protein 3
membrane-associated progesterone binding protein 3
Nbe.v1.1.chr03g33270
Nbe.v1.1.chr03g33270.1
Nbe.v1.s00150g33270
Nbe.v1.1.chr03:108896125-108898334
+
Niben101Scf07395g00029.1
Major facilitator superfamily protein
Major facilitator superfamily protein
Nbe.v1.1.chr03g33610
Nbe.v1.1.chr03g33610.1
Nbe.v1.s00150g33610
Nbe.v1.1.chr03:109462419-109478081
-
Niben101Scf04654g00002.1
Putative serine esterase family protein
NULL
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g18980
Nbe.v1.1.chr01g18980.1
Nbe.v1.s00160g18980
Nbe.v1.1.chr01:65482745-65484766
-
Niben101Scf02325g03013.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g33660
Nbe.v1.1.chr01g33660.1
Nbe.v1.s00160g33660
Nbe.v1.1.chr01:28547708-28552210
-
Niben101Scf13595g01022.1
transmembrane protein
NULL
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g08800
Nbe.v1.1.chr11g08800.1
Nbe.v1.s00170g08800
Nbe.v1.1.chr11:106760448-106777893
-
Niben101Scf07576g01018.1
Quinoprotein amine dehydrogenase%2C beta chain-like%3B RIC1-like guanyl-nucleotide exchange factor
Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
Nbe.v1.1.chr11g10360
Nbe.v1.1.chr11g10360.1
Nbe.v1.s00170g10360
Nbe.v1.1.chr11:102251521-102254301
+
Niben101Scf11653g01002.1
transmembrane protein
NULL
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g16870
Nbe.v1.1.chr11g16870.1
Nbe.v1.s00170g16870
Nbe.v1.1.chr11:86190970-86199537
+
Niben101Scf37888g00001.1
iron-regulated protein 3
iron-regulated protein 3
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g23280
Nbe.v1.1.chr11g23280.1
Nbe.v1.s00170g23280
Nbe.v1.1.chr11:68690494-68693174
-
DNAse I-like superfamily protein
DNAse I-like superfamily protein
Nbe.v1.1.chr16g28560
Nbe.v1.1.chr16g28560.1
Nbe.v1.s00180g28560
Nbe.v1.1.chr16:171837119-171838350
+
WD-40 repeat family protein / zfwd4 protein (ZFWD4)
WD-40 repeat family protein / zfwd4 protein (ZFWD4)
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr16g47830
Nbe.v1.1.chr16g47830.1
Nbe.v1.s00200g16420
Nbe.v1.1.chr16:48574186-48577480
+
CBS domain protein (DUF21)
NULL
Nbe.v1.1.chr15g34480
Nbe.v1.1.chr15g34480.1
Nbe.v1.s00210g02130
Nbe.v1.1.chr15:59079557-59084593
+
Niben101Scf00197g02006.1
Coatomer%2C alpha subunit
Coatomer, alpha subunit