N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 81

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00140
Nbe.v1.1.chr17g00140.1
Nbe.v1.s00010g00140
Nbe.v1.1.chr17:184025969-184027335
+
Niben101Scf01817g02021.1
Avr9/Cf-9 rapidly elicited protein
NULL
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g32080
Nbe.v1.1.chr17g32080.1
Nbe.v1.s00010g32080
Nbe.v1.1.chr17:76905273-76905764
+
Niben101Scf15672g00006.1
chitinase A
chitinase A
Nbe.v1.1.chr06g21350
Nbe.v1.1.chr06g21350.1
Nbe.v1.s00020g21350
Nbe.v1.1.chr06:77310652-77311128
+
carboxyl-terminal domain (ctd) phosphatase-like 2
carboxyl-terminal domain (ctd) phosphatase-like 2
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g10760
Nbe.v1.1.chr05g10760.1
Nbe.v1.s00030g10760
Nbe.v1.1.chr05:36583688-36584594
-
Niben101Scf03202g07008.1
APRATAXIN-like protein
APRATAXIN-like
Nbe.v1.1.chr05g10770
Nbe.v1.1.chr05g10770.1
Nbe.v1.s00030g10770
Nbe.v1.1.chr05:36592895-36593801
-
Niben101Scf03202g07008.1
APRATAXIN-like protein
APRATAXIN-like
Nbe.v1.1.chr05g25620
Nbe.v1.1.chr05g25620.1
Nbe.v1.s00030g25620
Nbe.v1.1.chr05:89112077-89129435
-
Niben101Scf14164g00017.1
MIP18 family protein
Protein of unknown function (DUF59)
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g09340
Nbe.v1.1.chr10g09340.1
Nbe.v1.s00050g09340
Nbe.v1.1.chr10:29687888-29688391
-
Niben101Scf04225g02002.1
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr10g17910
Nbe.v1.1.chr10g17910.1
Nbe.v1.s00050g17910
Nbe.v1.1.chr10:62587615-62587935
-
Niben101Scf00381g08004.1
mitochondrial ribosomal protein L11
NULL
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g42720
Nbe.v1.1.chr10g42720.1
Nbe.v1.s00050g42720
Nbe.v1.1.chr10:143445836-143449078
+
Avr9/Cf-9 rapidly elicited protein
NULL
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g20510
Nbe.v1.1.chr19g20510.1
Nbe.v1.s00060g20510
Nbe.v1.1.chr19:69544801-69563347
+
Niben101Scf14955g00012.1
starch synthase 3
starch synthase 3
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g31720
Nbe.v1.1.chr19g31720.1
Nbe.v1.s00060g31720
Nbe.v1.1.chr19:36097668-36102209
-
Niben101Scf08940g01004.1
lysine histidine transporter 1
lysine histidine transporter 1
Nbe.v1.1.chr19g43700
Nbe.v1.1.chr19g43700.1
Nbe.v1.s00060g43700
Nbe.v1.1.chr19:5594505-5596329
-
ubiquitin-specific protease 12
ubiquitin-specific protease 12
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g29280
Nbe.v1.1.chr12g29280.1
Nbe.v1.s00070g29280
Nbe.v1.1.chr12:45291595-45292062
-
Niben101Scf00381g08004.1
mitochondrial ribosomal protein L11
NULL
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g35410
Nbe.v1.1.chr12g35410.1
Nbe.v1.s00070g35410
Nbe.v1.1.chr12:27361307-27368151
-
Niben101Scf02446g00025.1
gamma carbonic anhydrase 1
gamma carbonic anhydrase 1
Nbe.v1.1.chr12g38310
Nbe.v1.1.chr12g38310.1
Nbe.v1.s00070g38310
Nbe.v1.1.chr12:17898058-17910886
-
Niben101Scf06898g03015.1
myosin heavy chain-like protein
myosin heavy chain-related
Nbe.v1.1.chr12g44560
Nbe.v1.1.chr12g44560.1
Nbe.v1.s00070g44560
Nbe.v1.1.chr12:581609-584913
+
Niben101Scf02558g00028.1
tolB protein-like protein
tolB protein-related
Nbe.v1.1.chr08g30800
Nbe.v1.1.chr08g30800.1
Nbe.v1.s00080g30800
Nbe.v1.1.chr08:111250647-111253055
-
Niben101Scf20135g00004.1
Leucine-rich repeat (LRR) family protein
NULL
Nbe.v1.1.chr02g06070
Nbe.v1.1.chr02g06070.1
Nbe.v1.s00090g06070
Nbe.v1.1.chr02:129851104-129874188
+
Niben101Scf14955g00012.1
starch synthase 3
starch synthase 3
Nbe.v1.1.chr02g09370
Nbe.v1.1.chr02g09370.1
Nbe.v1.s00090g09370
Nbe.v1.1.chr02:122299654-122302594
-
Niben101Scf06369g05021.1
MuDR family transposase
NULL
Nbe.v1.1.chr02g11020
Nbe.v1.1.chr02g11020.1
Nbe.v1.s00090g11020
Nbe.v1.1.chr02:119229123-119231531
+
Niben101Scf05948g04001.1
heat shock transcription factor A2
NULL
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g25710
Nbe.v1.1.chr02g25710.1
Nbe.v1.s00090g25710
Nbe.v1.1.chr02:79260651-79262592
-
Niben101Scf02222g00020.1
rho GTPase-activating protein
NULL
Nbe.v1.1.chr02g34290
Nbe.v1.1.chr02g34290.1
Nbe.v1.s00090g34290
Nbe.v1.1.chr02:45005989-45011410
-
Niben101Scf06898g03015.1
myosin heavy chain-like protein
myosin heavy chain-related
Nbe.v1.1.chr02g39810
Nbe.v1.1.chr02g39810.1
Nbe.v1.s00090g39810
Nbe.v1.1.chr02:21586682-21588461
+
Niben101Scf00177g02008.1
aluminum-activated%2C malate transporter 12
aluminum-activated, malate transporter 12
Nbe.v1.1.chr07g02750
Nbe.v1.1.chr07g02750.1
Nbe.v1.s00100g02750
Nbe.v1.1.chr07:134007004-134008223
+
fatty acyl-ACP thioesterases B
fatty acyl-ACP thioesterases B
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g18440
Nbe.v1.1.chr04g18440.1
Nbe.v1.s00130g18440
Nbe.v1.1.chr04:53475917-53476899
+
Kinase interacting (KIP1-like) family protein
Kinase interacting (KIP1-like) family protein
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g25680
Nbe.v1.1.chr04g25680.1
Nbe.v1.s00130g25680
Nbe.v1.1.chr04:28063274-28067185
-
Niben101Scf30239g00008.1
ABC-2 type transporter family protein
ABC-2 type transporter family protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g14430
Nbe.v1.1.chr14g14430.1
Nbe.v1.s00140g14430
Nbe.v1.1.chr14:82431703-82432131
-
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NULL
Nbe.v1.1.chr14g21170
Nbe.v1.1.chr14g21170.1
Nbe.v1.s00140g21170
Nbe.v1.1.chr14:65493275-65498065
-
Niben101Scf00114g00010.1
autophagy 9 (APG9)
autophagy 9 (APG9)
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g24520
Nbe.v1.1.chr03g24520.1
Nbe.v1.s00150g24520
Nbe.v1.1.chr03:87398160-87413579
+
Niben101Scf00595g05001.1
cleavage and polyadenylation specificity factor 100
cleavage and polyadenylation specificity factor 100
Nbe.v1.1.chr03g39270
Nbe.v1.1.chr03g39270.1
Nbe.v1.s00150g39270
Nbe.v1.1.chr03:121651795-121656426
-
Niben101Scf08653g07014.1
nuclear localized protein
NULL
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g16460
Nbe.v1.1.chr01g16460.1
Nbe.v1.s00160g16460
Nbe.v1.1.chr01:74040280-74046348
+
Niben101Scf01986g02021.1
polyamine oxidase 1
polyamine oxidase 1
Nbe.v1.1.chr01g16930
Nbe.v1.1.chr01g16930.1
Nbe.v1.s00160g16930
Nbe.v1.1.chr01:72255869-72258008
-
Niben101Scf03005g00005.1
myb domain protein 83
myb domain protein 83
Nbe.v1.1.chr01g17540
Nbe.v1.1.chr01g17540.1
Nbe.v1.s00160g17540
Nbe.v1.1.chr01:70071886-70076245
-
Niben101Scf04995g07008.1
phospholipase-like protein (PEARLI 4) family protein
NULL
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g38150
Nbe.v1.1.chr01g38150.1
Nbe.v1.s00160g38150
Nbe.v1.1.chr01:17599602-17601200
-
Niben101Scf04416g00006.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g16650
Nbe.v1.1.chr11g16650.1
Nbe.v1.s00170g16650
Nbe.v1.1.chr11:86854601-86860233
-
Niben101Scf00381g08004.1
mitochondrial ribosomal protein L11
NULL
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g22460
Nbe.v1.1.chr11g22460.1
Nbe.v1.s00170g22460
Nbe.v1.1.chr11:70731502-70764630
+
Niben101Scf04383g01024.1
target of rapamycin
target of rapamycin
Nbe.v1.1.chr11g33720
Nbe.v1.1.chr11g33720.1
Nbe.v1.s00170g33720
Nbe.v1.1.chr11:29814238-29822296
+
Niben101Scf08724g01003.1
U5 small nuclear ribonucleoprotein helicase
U5 small nuclear ribonucleoprotein helicase, putative
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr16g48180
Nbe.v1.1.chr16g48180.1
Nbe.v1.s00200g16770
Nbe.v1.1.chr16:49661483-49669003
+
Niben101Scf14164g00017.1
DNA methyltransferase 2
NULL