N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 81

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g10780
Nbe.v1.1.chr17g10780.1
Nbe.v1.s00010g10780
Nbe.v1.1.chr17:155206195-155207504
-
DNAse I-like superfamily protein
DNAse I-like superfamily protein
Nbe.v1.1.chr17g12430
Nbe.v1.1.chr17g12430.1
Nbe.v1.s00010g12430
Nbe.v1.1.chr17:149027266-149034033
-
Niben101Scf07844g00005.1
phloem protein 2-A13
phloem protein 2-A13
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g29450
Nbe.v1.1.chr17g29450.1
Nbe.v1.s00010g29450
Nbe.v1.1.chr17:86265744-86266274
+
transmembrane protein
NULL
Nbe.v1.1.chr06g15780
Nbe.v1.1.chr06g15780.1
Nbe.v1.s00020g15780
Nbe.v1.1.chr06:98868572-98875726
-
Niben101Scf03049g07019.1
DEAD box RNA helicase family protein
DEAD box RNA helicase family protein
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g25920
Nbe.v1.1.chr05g25920.1
Nbe.v1.s00030g25920
Nbe.v1.1.chr05:90288250-90290060
+
mechanosensitive channel of small conductance-like 6
mechanosensitive channel of small conductance-like 6
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr05g38490
Nbe.v1.1.chr05g38490.1
Nbe.v1.s00030g38490
Nbe.v1.1.chr05:143326989-143345517
-
Niben101Scf06407g00010.1
SART-1 family
NULL
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g16520
Nbe.v1.1.chr10g16520.1
Nbe.v1.s00050g16520
Nbe.v1.1.chr10:57826483-57834313
+
Niben101Scf02606g05019.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Calcium-dependent lipid-binding (CaLB domain) family protein
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g34550
Nbe.v1.1.chr10g34550.1
Nbe.v1.s00050g34550
Nbe.v1.1.chr10:118376449-118378047
+
Niben101Scf02541g09006.1
myb domain protein 67
myb domain protein 67
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g09720
Nbe.v1.1.chr19g09720.1
Nbe.v1.s00060g09720
Nbe.v1.1.chr19:106876843-106878156
+
Niben101Scf03256g02004.1
MYB family transcription factor
Plant protein of unknown function (DUF641)
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g33080
Nbe.v1.1.chr19g33080.1
Nbe.v1.s00060g33080
Nbe.v1.1.chr19:32691862-32697174
-
Niben101Scf00176g01010.1
phosphoinositide binding protein
phosphoinositide binding
Nbe.v1.1.chr19g37640
Nbe.v1.1.chr19g37640.1
Nbe.v1.s00060g37640
Nbe.v1.1.chr19:20736381-20745892
+
Niben101Scf10219g00027.1
Hydrolase-like protein family
NULL
Nbe.v1.1.chr19g40100
Nbe.v1.1.chr19g40100.1
Nbe.v1.s00060g40100
Nbe.v1.1.chr19:14802834-14807050
-
Niben101Scf03455g05017.1
3-ketoacyl-acyl carrier protein synthase I
3-ketoacyl-acyl carrier protein synthase I
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g44480
Nbe.v1.1.chr12g44480.1
Nbe.v1.s00070g44480
Nbe.v1.1.chr12:722037-723635
+
Niben101Scf00687g05003.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr08g14340
Nbe.v1.1.chr08g14340.1
Nbe.v1.s00080g14340
Nbe.v1.1.chr08:50479286-50484146
+
Niben101Scf22566g00017.1
proton pump interactor 1
NULL
Nbe.v1.1.chr02g06760
Nbe.v1.1.chr02g06760.1
Nbe.v1.s00090g06760
Nbe.v1.1.chr02:128470144-128481148
-
Niben101Scf03047g01006.1
phosphoinositide binding protein
phosphoinositide binding
Nbe.v1.1.chr02g15430
Nbe.v1.1.chr02g15430.1
Nbe.v1.s00090g15430
Nbe.v1.1.chr02:110047508-110051521
-
Niben101Scf06077g03014.1
glutamate receptor 3.6
NULL
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr07g20080
Nbe.v1.1.chr07g20080.1
Nbe.v1.s00100g20080
Nbe.v1.1.chr07:63074972-63075820
-
Niben101Scf00984g11002.1
zinc finger protein 3
zinc finger protein 3
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g35530
Nbe.v1.1.chr18g35530.1
Nbe.v1.s00110g35530
Nbe.v1.1.chr18:23314176-23318305
-
Niben101Scf00784g02005.1
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr13g14310
Nbe.v1.1.chr13g14310.1
Nbe.v1.s00120g14310
Nbe.v1.1.chr13:41561144-41565003
+
Niben101Scf00690g07017.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NULL
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g32010
Nbe.v1.1.chr13g32010.1
Nbe.v1.s00120g32010
Nbe.v1.1.chr13:91997683-92007094
-
Niben101Scf00234g01013.1
AT hook motif DNA-binding family protein
AT hook motif DNA-binding family protein
Nbe.v1.1.chr13g38170
Nbe.v1.1.chr13g38170.1
Nbe.v1.s00120g38170
Nbe.v1.1.chr13:107680856-107698737
+
Niben101Scf10305g01009.1
20S proteasome alpha subunit G1
20S proteasome alpha subunit G1
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g13390
Nbe.v1.1.chr14g13390.1
Nbe.v1.s00140g13390
Nbe.v1.1.chr14:85779901-85792332
-
Niben101Scf01273g02006.1
phosphoribosylformylglycinamidine synthase
NULL
Nbe.v1.1.chr14g17730
Nbe.v1.1.chr14g17730.1
Nbe.v1.s00140g17730
Nbe.v1.1.chr14:74050513-74058405
+
Niben101Scf09112g03006.1
sucrose synthase 1
NULL
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g40200
Nbe.v1.1.chr14g40200.1
Nbe.v1.s00140g40200
Nbe.v1.1.chr14:6079948-6081897
-
Niben101Scf06822g04004.1
Basic helix-loop-helix (bHLH) DNA-binding family protein
Basic helix-loop-helix (bHLH) DNA-binding family protein
Nbe.v1.1.chr03g03480
Nbe.v1.1.chr03g03480.1
Nbe.v1.s00150g03480
Nbe.v1.1.chr03:10489551-10492161
+
Niben101Scf00151g03003.1
methyl-CPG-binding domain 10
methyl-CPG-binding domain 10
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g14280
Nbe.v1.1.chr01g14280.1
Nbe.v1.s00160g14280
Nbe.v1.1.chr01:80524821-80529449
-
Niben101Scf00110g04020.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g28380
Nbe.v1.1.chr01g28380.1
Nbe.v1.s00160g28380
Nbe.v1.1.chr01:40124022-40128629
+
Galactose oxidase/kelch repeat superfamily protein
Galactose oxidase/kelch repeat superfamily protein
Nbe.v1.1.chr01g33990
Nbe.v1.1.chr01g33990.1
Nbe.v1.s00160g33990
Nbe.v1.1.chr01:27568443-27568955
+
Niben101Scf02283g00018.1
Tetratricopeptide repeat (TPR)-like superfamily protein
NULL
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g06810
Nbe.v1.1.chr11g06810.1
Nbe.v1.s00170g06810
Nbe.v1.1.chr11:112178668-112195590
+
Niben101Scf03085g00016.1
RING/FYVE/PHD zinc finger superfamily protein
RING/FYVE/PHD zinc finger superfamily protein
Nbe.v1.1.chr11g10130
Nbe.v1.1.chr11g10130.1
Nbe.v1.s00170g10130
Nbe.v1.1.chr11:102939097-102942677
-
Niben101Scf04347g01029.1
Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Nbe.v1.1.chr11g15840
Nbe.v1.1.chr11g15840.1
Nbe.v1.s00170g15840
Nbe.v1.1.chr11:88632944-88634038
-
Niben101Scf04861g00003.1
Malectin/receptor-like protein kinase family protein
Malectin/receptor-like protein kinase family protein
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g22020
Nbe.v1.1.chr11g22020.1
Nbe.v1.s00170g22020
Nbe.v1.1.chr11:72440930-72472472
+
Niben101Scf00397g02007.1
transcription regulator
transcription regulators
Nbe.v1.1.chr16g01450
Nbe.v1.1.chr16g01450.1
Nbe.v1.s00180g01450
Nbe.v1.1.chr16:73172252-73173408
+
midasin-like protein
ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding
Nbe.v1.1.chr16g22720
Nbe.v1.1.chr16g22720.1
Nbe.v1.s00180g22720
Nbe.v1.1.chr16:154455001-154462674
+
Niben101Scf06716g00006.1
20S proteasome alpha subunit G1
20S proteasome alpha subunit G1
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr16g33780
Nbe.v1.1.chr16g33780.1
Nbe.v1.s00200g02370
Nbe.v1.1.chr16:5660726-5664710
+
Niben101Scf02278g01011.1
proline extensin-like receptor kinase 1
proline extensin-like receptor kinase 1
Nbe.v1.1.chr16g35170
Nbe.v1.1.chr16g35170.1
Nbe.v1.s00200g03760
Nbe.v1.1.chr16:9377040-9379532
-
Niben101Scf02790g05011.1
TATA-binding related factor (TRF) of subunit 20 of Mediator complex
NULL
Nbe.v1.1.chr15g38380
Nbe.v1.1.chr15g38380.1
Nbe.v1.s00210g06030
Nbe.v1.1.chr15:46940445-46942734
+
Niben101Scf02814g03006.1
geranylgeranyl reductase
geranylgeranyl reductase
Nbe.v1.1.chr15g44070
Nbe.v1.1.chr15g44070.1
Nbe.v1.s00210g11720
Nbe.v1.1.chr15:22470427-22476789
-
Niben101Scf02711g00003.1
histidine kinase 3
histidine kinase 3