N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 74

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g03690
Nbe.v1.1.chr17g03690.1
Nbe.v1.s00010g03690
Nbe.v1.1.chr17:175891546-175895705
+
Niben101Scf12089g00031.1
APO RNA-binding protein (DUF794)
Arabidopsis thaliana protein of unknown function (DUF794)
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g38720
Nbe.v1.1.chr17g38720.1
Nbe.v1.s00010g38720
Nbe.v1.1.chr17:47795065-47801194
+
Niben101Scf09397g00001.1
CTC-interacting domain 7
NULL
Nbe.v1.1.chr06g10280
Nbe.v1.1.chr06g10280.1
Nbe.v1.s00020g10280
Nbe.v1.1.chr06:118536254-118536583
-
No description
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g37970
Nbe.v1.1.chr10g37970.1
Nbe.v1.s00050g37970
Nbe.v1.1.chr10:129702092-129704889
-
Niben101Scf17688g00028.1
APO RNA-binding protein (DUF794)
Arabidopsis thaliana protein of unknown function (DUF794)
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41070
Nbe.v1.1.chr10g41070.1
Nbe.v1.s00050g41070
Nbe.v1.1.chr10:139882851-139885963
-
Niben101Scf10840g00002.1
Cellulase (glycosyl hydrolase family 5) protein
Cellulase (glycosyl hydrolase family 5) protein
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g14960
Nbe.v1.1.chr19g14960.1
Nbe.v1.s00060g14960
Nbe.v1.1.chr19:88579884-88580742
-
Niben101Scf02771g01008.1
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g27880
Nbe.v1.1.chr19g27880.1
Nbe.v1.s00060g27880
Nbe.v1.1.chr19:44575504-44586839
-
Niben101Scf08863g01010.1
Cyclic nucleotide-regulated ion channel family protein
Cyclic nucleotide-regulated ion channel family protein
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g19510
Nbe.v1.1.chr12g19510.1
Nbe.v1.s00070g19510
Nbe.v1.1.chr12:73784993-73786783
+
Niben101Scf03129g03012.1
Adenine nucleotide alpha hydrolases-like superfamily protein
Adenine nucleotide alpha hydrolases-like superfamily protein
Nbe.v1.1.chr12g26840
Nbe.v1.1.chr12g26840.1
Nbe.v1.s00070g26840
Nbe.v1.1.chr12:51441483-51441869
-
Niben101Scf00271g07003.1
NagB/RpiA/CoA transferase-like superfamily protein
NagB/RpiA/CoA transferase-like superfamily protein
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr02g03670
Nbe.v1.1.chr02g03670.1
Nbe.v1.s00090g03670
Nbe.v1.1.chr02:135585564-135591172
+
Niben101Scf08680g02015.1
Cyclic nucleotide-regulated ion channel family protein
Cyclic nucleotide-regulated ion channel family protein
Nbe.v1.1.chr02g15700
Nbe.v1.1.chr02g15700.1
Nbe.v1.s00090g15700
Nbe.v1.1.chr02:109363033-109365052
-
global transcription factor group E3
NULL
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g31990
Nbe.v1.1.chr02g31990.1
Nbe.v1.s00090g31990
Nbe.v1.1.chr02:56838845-56855808
-
Niben101Scf09153g05021.1
TraB family protein
TraB family protein
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g30550
Nbe.v1.1.chr07g30550.1
Nbe.v1.s00100g30550
Nbe.v1.1.chr07:23453113-23511613
-
Niben101Scf08669g00008.1
myosin
myosin, putative
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g38860
Nbe.v1.1.chr18g38860.1
Nbe.v1.s00110g38860
Nbe.v1.1.chr18:9865442-9869881
-
Calcium-dependent protein kinase (CDPK) family protein
Calcium-dependent protein kinase (CDPK) family protein
Nbe.v1.1.chr13g15590
Nbe.v1.1.chr13g15590.1
Nbe.v1.s00120g15590
Nbe.v1.1.chr13:48002962-48007433
+
Niben101Scf03494g12003.1
STRUBBELIG-receptor family 2
STRUBBELIG-receptor family 2
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g21060
Nbe.v1.1.chr13g21060.1
Nbe.v1.s00120g21060
Nbe.v1.1.chr13:65392024-65392911
+
WRKY transcription factor
NULL
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g14000
Nbe.v1.1.chr04g14000.1
Nbe.v1.s00130g14000
Nbe.v1.1.chr04:69292438-69309373
+
Niben101Scf05385g04006.1
Neutral/alkaline non-lysosomal ceramidase
Neutral/alkaline non-lysosomal ceramidase
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g31520
Nbe.v1.1.chr14g31520.1
Nbe.v1.s00140g31520
Nbe.v1.1.chr14:32281236-32281520
+
No description
Nbe.v1.1.chr14g31900
Nbe.v1.1.chr14g31900.1
Nbe.v1.s00140g31900
Nbe.v1.1.chr14:31061113-31061475
+
transducin family protein / WD-40 repeat family protein
transducin family protein / WD-40 repeat family protein
Nbe.v1.1.chr14g32060
Nbe.v1.1.chr14g32060.1
Nbe.v1.s00140g32060
Nbe.v1.1.chr14:30762051-30762530
+
Niben101Scf02325g03013.1
Tetratricopeptide repeat (TPR)-like superfamily protein
NULL
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g10150
Nbe.v1.1.chr03g10150.1
Nbe.v1.s00150g10150
Nbe.v1.1.chr03:33088054-33090288
-
weak chloroplast movement under blue light protein (DUF827)
Plant protein of unknown function (DUF827)
Nbe.v1.1.chr03g13310
Nbe.v1.1.chr03g13310.1
Nbe.v1.s00150g13310
Nbe.v1.1.chr03:47235749-47242163
+
Niben101Scf03494g12003.1
STRUBBELIG-receptor family 2
STRUBBELIG-receptor family 2
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g38420
Nbe.v1.1.chr03g38420.1
Nbe.v1.s00150g38420
Nbe.v1.1.chr03:119873333-119877067
+
Niben101Scf07623g01029.1
FRIGIDA-like protein
FRIGIDA-like protein
Nbe.v1.1.chr01g11330
Nbe.v1.1.chr01g11330.1
Nbe.v1.s00160g11330
Nbe.v1.1.chr01:93303186-93303533
-
vascular plant one zinc finger protein
NULL
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr01g45770
Nbe.v1.1.chr01g45770.1
Nbe.v1.s00160g45770
Nbe.v1.1.chr01:799965-804186
+
Niben101Scf04053g03018.1
G patch domain protein
NULL
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g25360
Nbe.v1.1.chr11g25360.1
Nbe.v1.s00170g25360
Nbe.v1.1.chr11:58753273-58760177
-
Niben101Scf14344g01016.1
trehalose-phosphatase/synthase 3
trehalose-phosphatase/synthase 3
Nbe.v1.1.chr11g34940
Nbe.v1.1.chr11g34940.1
Nbe.v1.s00170g34940
Nbe.v1.1.chr11:26676136-26679336
-
Niben101Scf02369g04004.1
related to AP2.7
related to AP2.7
Nbe.v1.1.chr16g07660
Nbe.v1.1.chr16g07660.1
Nbe.v1.s00180g07660
Nbe.v1.1.chr16:95727850-95728389
-
Niben101Scf01765g02005.1
Cysteine/Histidine-rich C1 domain family protein
Cysteine/Histidine-rich C1 domain family protein
Nbe.v1.1.chr16g09060
Nbe.v1.1.chr16g09060.1
Nbe.v1.s00180g09060
Nbe.v1.1.chr16:102034340-102034849
-
Niben101Scf16997g00001.1
Minichromosome maintenance (MCM2/3/5) family protein
Minichromosome maintenance (MCM2/3/5) family protein
Nbe.v1.1.chr16g30370
Nbe.v1.1.chr16g30370.1
Nbe.v1.s00180g30370
Nbe.v1.1.chr16:177864981-177865942
-
zinc finger (C2H2 type) family protein
zinc finger (C2H2 type) family protein
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g44410
Nbe.v1.1.chr15g44410.1
Nbe.v1.s00210g12060
Nbe.v1.1.chr15:21037923-21038310
-
phosphatidylinositol-speciwc phospholipase C8
phosphatidylinositol-speciwc phospholipase C8