N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 80

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr06g41410
Nbe.v1.1.chr06g41410.1
Nbe.v1.s00020g41410
Nbe.v1.1.chr06:3281599-3288296
+
Niben101Ctg11806g00004.1
Cysteine proteinases superfamily protein
Cysteine proteinases superfamily protein
Nbe.v1.1.chr05g02680
Nbe.v1.1.chr05g02680.1
Nbe.v1.s00030g02680
Nbe.v1.1.chr05:10415346-10419330
+
Niben101Scf04418g09010.1
RNA helicase family protein
NULL
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g18510
Nbe.v1.1.chr05g18510.1
Nbe.v1.s00030g18510
Nbe.v1.1.chr05:63811915-63814368
+
Niben101Scf00611g08002.1
Protein phosphatase 2C family protein
Protein phosphatase 2C family protein
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g12960
Nbe.v1.1.chr09g12960.1
Nbe.v1.s00040g12960
Nbe.v1.1.chr09:104476075-104477076
+
Niben101Scf00798g01008.1
hypothetical protein
NULL
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g34850
Nbe.v1.1.chr09g34850.1
Nbe.v1.s00040g34850
Nbe.v1.1.chr09:30518229-30524879
-
Niben101Scf02306g02017.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Nbe.v1.1.chr10g02360
Nbe.v1.1.chr10g02360.1
Nbe.v1.s00050g02360
Nbe.v1.1.chr10:6298239-6312370
-
Niben101Scf01501g00001.1
Tesmin/TSO1-like CXC domain-containing protein
Tesmin/TSO1-like CXC domain-containing protein
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g05180
Nbe.v1.1.chr19g05180.1
Nbe.v1.s00060g05180
Nbe.v1.1.chr19:124451889-124457050
+
Niben101Scf06101g00009.1
Cysteine proteinases superfamily protein
Cysteine proteinases superfamily protein
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g19060
Nbe.v1.1.chr19g19060.1
Nbe.v1.s00060g19060
Nbe.v1.1.chr19:75140023-75142390
+
FRS (FAR1 Related Sequences) transcription factor family
NULL
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g26650
Nbe.v1.1.chr19g26650.1
Nbe.v1.s00060g26650
Nbe.v1.1.chr19:47966771-47968873
+
Niben101Scf11232g01011.1
glycosyl hydrolase family 81 protein
glycosyl hydrolase family 81 protein
Nbe.v1.1.chr19g40790
Nbe.v1.1.chr19g40790.1
Nbe.v1.s00060g40790
Nbe.v1.1.chr19:13224217-13226133
+
Niben101Scf00351g02003.1
beta HLH protein 93
beta HLH protein 93
Nbe.v1.1.chr19g42310
Nbe.v1.1.chr19g42310.1
Nbe.v1.s00060g42310
Nbe.v1.1.chr19:9403389-9412614
+
Niben101Scf02381g06003.1
plastidic GLC translocator
plastidic GLC translocator
Nbe.v1.1.chr19g45060
Nbe.v1.1.chr19g45060.1
Nbe.v1.s00060g45060
Nbe.v1.1.chr19:2121421-2125340
-
Niben101Scf06267g01006.1
Small nuclear ribonucleoprotein family protein
Small nuclear ribonucleoprotein family protein
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g11180
Nbe.v1.1.chr12g11180.1
Nbe.v1.s00070g11180
Nbe.v1.1.chr12:103121372-103122847
+
Niben101Scf06277g03004.1
Peroxidase superfamily protein
Peroxidase superfamily protein
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr08g04120
Nbe.v1.1.chr08g04120.1
Nbe.v1.s00080g04120
Nbe.v1.1.chr08:12274743-12275042
+
SCARECROW-like 1
SCARECROW-like 1
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g39810
Nbe.v1.1.chr02g39810.1
Nbe.v1.s00090g39810
Nbe.v1.1.chr02:21586682-21588461
+
Niben101Scf00177g02008.1
aluminum-activated%2C malate transporter 12
aluminum-activated, malate transporter 12
Nbe.v1.1.chr02g41060
Nbe.v1.1.chr02g41060.1
Nbe.v1.s00090g41060
Nbe.v1.1.chr02:15951585-15958898
+
Niben101Scf02499g02007.1
WRKY DNA-binding protein 2
WRKY DNA-binding protein 2
Nbe.v1.1.chr07g01100
Nbe.v1.1.chr07g01100.1
Nbe.v1.s00100g01100
Nbe.v1.1.chr07:139363492-139363878
-
Niben101Scf02124g01029.1
pentatricopeptide (PPR) repeat-containing protein
pentatricopeptide (PPR) repeat-containing protein
Nbe.v1.1.chr07g01820
Nbe.v1.1.chr07g01820.1
Nbe.v1.s00100g01820
Nbe.v1.1.chr07:137941699-137955593
-
Niben101Scf06976g04005.1
transcriptional regulator
NULL
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g01650
Nbe.v1.1.chr18g01650.1
Nbe.v1.s00110g01650
Nbe.v1.1.chr18:136614886-136618206
+
Niben101Scf05756g00003.1
Protein phosphatase 2C family protein
Protein phosphatase 2C family protein
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g36380
Nbe.v1.1.chr18g36380.1
Nbe.v1.s00110g36380
Nbe.v1.1.chr18:19440715-19455329
+
Niben101Scf00971g00014.1
UDP-Glycosyltransferase superfamily protein
UDP-Glycosyltransferase superfamily protein
Nbe.v1.1.chr13g12690
Nbe.v1.1.chr13g12690.1
Nbe.v1.s00120g12690
Nbe.v1.1.chr13:37093357-37095990
-
Niben101Scf02922g02027.1
Plant calmodulin-binding protein-like protein
NULL
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g30120
Nbe.v1.1.chr13g30120.1
Nbe.v1.s00120g30120
Nbe.v1.1.chr13:88617055-88623837
+
Niben101Scf09365g00010.1
Pentatricopeptide repeat (PPR) superfamily protein
NULL
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g02060
Nbe.v1.1.chr14g02060.1
Nbe.v1.s00140g02060
Nbe.v1.1.chr14:125797047-125798258
-
Niben101Scf05553g00007.1
Ubiquitin carboxyl-terminal hydrolase family protein
Ubiquitin carboxyl-terminal hydrolase family protein
Nbe.v1.1.chr14g03050
Nbe.v1.1.chr14g03050.1
Nbe.v1.s00140g03050
Nbe.v1.1.chr14:121837438-121838502
-
FRS (FAR1 Related Sequences) transcription factor family
NULL
Nbe.v1.1.chr14g07420
Nbe.v1.1.chr14g07420.1
Nbe.v1.s00140g07420
Nbe.v1.1.chr14:106730648-106745555
+
Niben101Scf30375g00002.1
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Nbe.v1.1.chr14g07520
Nbe.v1.1.chr14g07520.1
Nbe.v1.s00140g07520
Nbe.v1.1.chr14:106497624-106512530
+
Niben101Scf30375g00002.1
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g37430
Nbe.v1.1.chr03g37430.1
Nbe.v1.s00150g37430
Nbe.v1.1.chr03:117921595-117932409
-
Niben101Scf06976g04005.1
transcriptional regulator
NULL
Nbe.v1.1.chr01g09910
Nbe.v1.1.chr01g09910.1
Nbe.v1.s00160g09910
Nbe.v1.1.chr01:98501059-98502639
+
Niben101Scf01985g02005.1
Flavin-containing monooxygenase family protein
Flavin-containing monooxygenase family protein
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g42270
Nbe.v1.1.chr01g42270.1
Nbe.v1.s00160g42270
Nbe.v1.1.chr01:8117296-8120499
+
Niben101Scf02408g02009.1
nitrite reductase 1
nitrite reductase 1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g28430
Nbe.v1.1.chr11g28430.1
Nbe.v1.s00170g28430
Nbe.v1.1.chr11:48227008-48232918
+
Niben101Scf05183g01003.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Nbe.v1.1.chr16g02420
Nbe.v1.1.chr16g02420.1
Nbe.v1.s00180g02420
Nbe.v1.1.chr16:76671582-76675290
-
Niben101Scf04485g02016.1
RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-binding (RRM/RBD/RNP motifs) family protein
Nbe.v1.1.chr15g05990
Nbe.v1.1.chr15g05990.1
Nbe.v1.s00190g05990
Nbe.v1.1.chr15:158697898-158699722
+
FAR1-related sequence 2
FAR1-related sequence 2
Nbe.v1.1.chr15g12550
Nbe.v1.1.chr15g12550.1
Nbe.v1.s00190g12550
Nbe.v1.1.chr15:136617795-136618193
-
Niben101Scf00311g05003.1
No description
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g24470
Nbe.v1.1.chr15g24470.1
Nbe.v1.s00190g24470
Nbe.v1.1.chr15:93293525-93302585
-
Niben101Scf01146g09030.1
pleiotropic drug resistance 12
pleiotropic drug resistance 12
Nbe.v1.1.chr16g33850
Nbe.v1.1.chr16g33850.1
Nbe.v1.s00200g02440
Nbe.v1.1.chr16:5825995-5838772
-
Niben101Scf13098g00012.1
Tesmin/TSO1-like CXC domain-containing protein
Tesmin/TSO1-like CXC domain-containing protein
Nbe.v1.1.chr16g36060
Nbe.v1.1.chr16g36060.1
Nbe.v1.s00200g04650
Nbe.v1.1.chr16:11442459-11442815
+
No description
Nbe.v1.1.chr16g51580
Nbe.v1.1.chr16g51580.1
Nbe.v1.s00200g20170
Nbe.v1.1.chr16:64662111-64665345
+
FAR1-related sequence 6
FAR1-related sequence 6