N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 57

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g07050
Nbe.v1.1.chr17g07050.1
Nbe.v1.s00010g07050
Nbe.v1.1.chr17:166246149-166250731
-
Niben101Scf02307g02001.1
DNA-binding bromodomain-containing protein
DNA-binding bromodomain-containing protein
Nbe.v1.1.chr17g11130
Nbe.v1.1.chr17g11130.1
Nbe.v1.s00010g11130
Nbe.v1.1.chr17:153734495-153740840
-
Niben101Scf04124g04001.1
e
putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain
Nbe.v1.1.chr17g11140
Nbe.v1.1.chr17g11140.1
Nbe.v1.s00010g11140
Nbe.v1.1.chr17:153680049-153693007
-
Niben101Scf03599g00006.1
Nucleotidyltransferase family protein
NULL
Nbe.v1.1.chr17g28760
Nbe.v1.1.chr17g28760.1
Nbe.v1.s00010g28760
Nbe.v1.1.chr17:88251524-88258379
-
No description
Nbe.v1.1.chr17g30090
Nbe.v1.1.chr17g30090.1
Nbe.v1.s00010g30090
Nbe.v1.1.chr17:84467342-84468898
+
Niben101Scf13289g02003.1
Ras-induced vulval development antagonist protein
NULL
Nbe.v1.1.chr06g09790
Nbe.v1.1.chr06g09790.1
Nbe.v1.s00020g09790
Nbe.v1.1.chr06:120446973-120447990
+
Niben101Scf07748g01001.1
winged-helix DNA-binding transcription factor family protein
winged-helix DNA-binding transcription factor family protein
Nbe.v1.1.chr06g25170
Nbe.v1.1.chr06g25170.1
Nbe.v1.s00020g25170
Nbe.v1.1.chr06:62954150-62970923
+
Niben101Scf02340g08001.1
SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein
SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Nbe.v1.1.chr06g33350
Nbe.v1.1.chr06g33350.1
Nbe.v1.s00020g33350
Nbe.v1.1.chr06:33342635-33344706
+
Niben101Scf07763g02004.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr06g34460
Nbe.v1.1.chr06g34460.1
Nbe.v1.s00020g34460
Nbe.v1.1.chr06:28852048-28865172
-
Niben101Scf00978g02010.1
AAA-type ATPase family protein
AAA-type ATPase family protein
Nbe.v1.1.chr05g01670
Nbe.v1.1.chr05g01670.1
Nbe.v1.s00030g01670
Nbe.v1.1.chr05:5935081-5946020
-
Niben101Scf01970g01011.1
magnesium transporter%2C putative (DUF803)
Protein of unknown function (DUF803)
Nbe.v1.1.chr05g16600
Nbe.v1.1.chr05g16600.1
Nbe.v1.s00030g16600
Nbe.v1.1.chr05:56641565-56646862
-
Niben101Scf00371g00005.1
COP1-interacting protein 7
COP1-interacting protein 7
Nbe.v1.1.chr05g23820
Nbe.v1.1.chr05g23820.1
Nbe.v1.s00030g23820
Nbe.v1.1.chr05:82685697-82687322
-
Niben101Scf02917g00002.1
Basic-leucine zipper (bZIP) transcription factor family protein
NULL
Nbe.v1.1.chr05g25390
Nbe.v1.1.chr05g25390.1
Nbe.v1.s00030g25390
Nbe.v1.1.chr05:88293244-88309098
-
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr05g25420
Nbe.v1.1.chr05g25420.1
Nbe.v1.s00030g25420
Nbe.v1.1.chr05:88369598-88385449
-
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr05g25450
Nbe.v1.1.chr05g25450.1
Nbe.v1.s00030g25450
Nbe.v1.1.chr05:88446177-88462028
-
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr05g25480
Nbe.v1.1.chr05g25480.1
Nbe.v1.s00030g25480
Nbe.v1.1.chr05:88518903-88534754
-
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr05g25510
Nbe.v1.1.chr05g25510.1
Nbe.v1.s00030g25510
Nbe.v1.1.chr05:88591593-88607448
-
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr05g25530
Nbe.v1.1.chr05g25530.1
Nbe.v1.s00030g25530
Nbe.v1.1.chr05:88675940-88697686
-
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr09g07090
Nbe.v1.1.chr09g07090.1
Nbe.v1.s00040g07090
Nbe.v1.1.chr09:124548280-124549887
+
Niben101Scf09670g02006.1
MAEBL domain protein
NULL
Nbe.v1.1.chr10g09850
Nbe.v1.1.chr10g09850.1
Nbe.v1.s00050g09850
Nbe.v1.1.chr10:31955122-31960488
+
Niben101Scf03679g03018.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr19g04180
Nbe.v1.1.chr19g04180.1
Nbe.v1.s00060g04180
Nbe.v1.1.chr19:129426958-129428898
-
Niben101Scf01066g05008.1
diacylglycerol acyltransferase
NULL
Nbe.v1.1.chr19g05650
Nbe.v1.1.chr19g05650.1
Nbe.v1.s00060g05650
Nbe.v1.1.chr19:122701048-122720921
+
Niben101Scf05827g07003.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr19g12080
Nbe.v1.1.chr19g12080.1
Nbe.v1.s00060g12080
Nbe.v1.1.chr19:95993105-96001166
-
Niben101Scf01970g01011.1
magnesium transporter%2C putative (DUF803)
Protein of unknown function (DUF803)
Nbe.v1.1.chr19g18430
Nbe.v1.1.chr19g18430.1
Nbe.v1.s00060g18430
Nbe.v1.1.chr19:77396778-77418857
+
Niben101Scf00149g06015.1
AMP deaminase%2C putative / myoadenylate deaminase
AMP deaminase, putative / myoadenylate deaminase, putative
Nbe.v1.1.chr19g21130
Nbe.v1.1.chr19g21130.1
Nbe.v1.s00060g21130
Nbe.v1.1.chr19:67110015-67111279
-
MUTL protein homolog 3
MUTL protein homolog 3
Nbe.v1.1.chr19g32940
Nbe.v1.1.chr19g32940.1
Nbe.v1.s00060g32940
Nbe.v1.1.chr19:33088694-33096607
-
Niben101Scf05222g04018.1
cytosolic invertase 2
cytosolic invertase 2
Nbe.v1.1.chr19g34850
Nbe.v1.1.chr19g34850.1
Nbe.v1.s00060g34850
Nbe.v1.1.chr19:28146797-28151772
-
Niben101Scf04384g00008.1
disease resistance protein (TIR class)
disease resistance protein (TIR class), putative
Nbe.v1.1.chr19g41920
Nbe.v1.1.chr19g41920.1
Nbe.v1.s00060g41920
Nbe.v1.1.chr19:10192979-10194957
-
Niben101Scf06394g04009.1
PLASTID MOVEMENT IMPAIRED protein (DUF827)
NULL
Nbe.v1.1.chr12g23820
Nbe.v1.1.chr12g23820.1
Nbe.v1.s00070g23820
Nbe.v1.1.chr12:61411925-61416722
-
Niben101Scf00860g03017.1
LOW protein: protein phosphatase 1 regulatory subunit-like protein
NULL
Nbe.v1.1.chr12g41360
Nbe.v1.1.chr12g41360.1
Nbe.v1.s00070g41360
Nbe.v1.1.chr12:8436359-8438400
+
Niben101Scf08041g03005.1
mediator of RNA polymerase II transcription subunit-like protein
NULL
Nbe.v1.1.chr08g02030
Nbe.v1.1.chr08g02030.1
Nbe.v1.s00080g02030
Nbe.v1.1.chr08:6592465-6606272
-
Niben101Scf10559g01039.1
NIN like protein 7
NIN like protein 7
Nbe.v1.1.chr08g06410
Nbe.v1.1.chr08g06410.1
Nbe.v1.s00080g06410
Nbe.v1.1.chr08:21440762-21441046
-
Niben101Scf05005g07007.1
General transcription factor 2-related zinc finger protein
General transcription factor 2-related zinc finger protein
Nbe.v1.1.chr08g18870
Nbe.v1.1.chr08g18870.1
Nbe.v1.s00080g18870
Nbe.v1.1.chr08:68583029-68594298
-
Niben101Scf02937g09017.1
cyclin-like protein
cyclin-related
Nbe.v1.1.chr02g16710
Nbe.v1.1.chr02g16710.1
Nbe.v1.s00090g16710
Nbe.v1.1.chr02:107088471-107090488
+
Niben101Scf06394g04009.1
PLASTID MOVEMENT IMPAIRED protein (DUF827)
NULL
Nbe.v1.1.chr02g37900
Nbe.v1.1.chr02g37900.1
Nbe.v1.s00090g37900
Nbe.v1.1.chr02:27953467-27971252
+
Niben101Scf04028g01007.1
histone-lysine N-methyltransferase
NULL
Nbe.v1.1.chr07g18090
Nbe.v1.1.chr07g18090.1
Nbe.v1.s00100g18090
Nbe.v1.1.chr07:69708445-69710411
-
Niben101Scf02483g02004.1
myb domain protein 16
myb domain protein 16
Nbe.v1.1.chr07g26240
Nbe.v1.1.chr07g26240.1
Nbe.v1.s00100g26240
Nbe.v1.1.chr07:40118774-40139525
+
Niben101Scf03979g01011.1
acetyl-CoA synthetase
acetyl-CoA synthetase
Nbe.v1.1.chr07g29630
Nbe.v1.1.chr07g29630.1
Nbe.v1.s00100g29630
Nbe.v1.1.chr07:27435634-27437501
-
Niben101Scf02838g07016.1
blue-copper-binding protein
blue-copper-binding protein
Nbe.v1.1.chr18g10280
Nbe.v1.1.chr18g10280.1
Nbe.v1.s00110g10280
Nbe.v1.1.chr18:107329937-107330396
-
Niben101Scf01919g01008.1
Coatomer%2C alpha subunit
Coatomer, alpha subunit
Nbe.v1.1.chr18g13100
Nbe.v1.1.chr18g13100.1
Nbe.v1.s00110g13100
Nbe.v1.1.chr18:98673413-98677157
-
SDA1 family protein
SDA1 family protein
Nbe.v1.1.chr13g04690
Nbe.v1.1.chr13g04690.1
Nbe.v1.s00120g04690
Nbe.v1.1.chr13:15786207-15793506
-
Niben101Scf03184g01002.1
RNA-binding KH domain-containing protein
RNA-binding KH domain-containing protein
Nbe.v1.1.chr13g15950
Nbe.v1.1.chr13g15950.1
Nbe.v1.s00120g15950
Nbe.v1.1.chr13:49505940-49511327
+
Niben101Scf04138g00002.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr13g21500
Nbe.v1.1.chr13g21500.1
Nbe.v1.s00120g21500
Nbe.v1.1.chr13:66839965-66845061
+
stress response NST1-like protein
NULL
Nbe.v1.1.chr13g33180
Nbe.v1.1.chr13g33180.1
Nbe.v1.s00120g33180
Nbe.v1.1.chr13:94723829-94735298
-
Niben101Scf18000g00028.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr14g02220
Nbe.v1.1.chr14g02220.1
Nbe.v1.s00140g02220
Nbe.v1.1.chr14:125068907-125071739
-
Niben101Scf01664g02019.1
No description
Nbe.v1.1.chr14g08920
Nbe.v1.1.chr14g08920.1
Nbe.v1.s00140g08920
Nbe.v1.1.chr14:101844090-101845128
-
Niben101Scf27562g00007.1
Ethylene insensitive 3 family protein
Ethylene insensitive 3 family protein
Nbe.v1.1.chr14g31150
Nbe.v1.1.chr14g31150.1
Nbe.v1.s00140g31150
Nbe.v1.1.chr14:33638495-33648671
+
Niben101Scf06902g00006.1
Cyclin/Brf1-like TBP-binding protein
NULL
Nbe.v1.1.chr03g21460
Nbe.v1.1.chr03g21460.1
Nbe.v1.s00150g21460
Nbe.v1.1.chr03:78677217-78682607
+
Niben101Scf04138g00002.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr03g43150
Nbe.v1.1.chr03g43150.1
Nbe.v1.s00150g43150
Nbe.v1.1.chr03:129562179-129573102
+
Niben101Scf18000g00028.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr01g08190
Nbe.v1.1.chr01g08190.1
Nbe.v1.s00160g08190
Nbe.v1.1.chr01:104987464-104989074
+
Niben101Scf00367g08003.1
No description
Nbe.v1.1.chr01g08580
Nbe.v1.1.chr01g08580.1
Nbe.v1.s00160g08580
Nbe.v1.1.chr01:103487095-103495151
+
Niben101Scf02525g03002.1
COP1-interacting protein-like protein
COP1-interacting protein-related
Nbe.v1.1.chr01g32330
Nbe.v1.1.chr01g32330.1
Nbe.v1.s00160g32330
Nbe.v1.1.chr01:31798861-31801698
+
Niben101Scf37767g00002.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr01g38640
Nbe.v1.1.chr01g38640.1
Nbe.v1.s00160g38640
Nbe.v1.1.chr01:16175426-16186631
+
Niben101Scf03599g00006.1
Nucleotidyltransferase family protein
NULL
Nbe.v1.1.chr11g15100
Nbe.v1.1.chr11g15100.1
Nbe.v1.s00170g15100
Nbe.v1.1.chr11:90042071-90043605
-
Niben101Scf07109g00007.1
myb domain protein 4
myb domain protein 4
Nbe.v1.1.chr16g02050
Nbe.v1.1.chr16g02050.1
Nbe.v1.s00180g02050
Nbe.v1.1.chr16:75409249-75418174
+
Niben101Scf02525g03002.1
COP1-interacting protein-like protein
COP1-interacting protein-related
Nbe.v1.1.chr16g30910
Nbe.v1.1.chr16g30910.1
Nbe.v1.s00180g30910
Nbe.v1.1.chr16:179234440-179235440
-
Niben101Scf04361g01001.1
winged-helix DNA-binding transcription factor family protein
winged-helix DNA-binding transcription factor family protein
Nbe.v1.1.chr15g09420
Nbe.v1.1.chr15g09420.1
Nbe.v1.s00190g09420
Nbe.v1.1.chr15:145938230-145944432
+
Niben101Scf07007g01015.1
COP1-interacting protein 7
COP1-interacting protein 7