N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 72

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g28760
Nbe.v1.1.chr17g28760.1
Nbe.v1.s00010g28760
Nbe.v1.1.chr17:88251524-88258379
-
No description
Nbe.v1.1.chr06g32380
Nbe.v1.1.chr06g32380.1
Nbe.v1.s00020g32380
Nbe.v1.1.chr06:36451922-36455055
-
Niben101Scf00572g00003.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr06g42280
Nbe.v1.1.chr06g42280.1
Nbe.v1.s00020g42280
Nbe.v1.1.chr06:1398261-1399259
-
Niben101Scf12127g00006.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NULL
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g20080
Nbe.v1.1.chr09g20080.1
Nbe.v1.s00040g20080
Nbe.v1.1.chr09:80949820-80952174
-
Niben101Scf02172g06025.1
T-box transcription factor%2C putative (DUF863)
NULL
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g14680
Nbe.v1.1.chr10g14680.1
Nbe.v1.s00050g14680
Nbe.v1.1.chr10:51340382-51340702
+
Niben101Scf01943g10015.1
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g23490
Nbe.v1.1.chr10g23490.1
Nbe.v1.s00050g23490
Nbe.v1.1.chr10:79202506-79202939
-
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
Nbe.v1.1.chr10g29720
Nbe.v1.1.chr10g29720.1
Nbe.v1.s00050g29720
Nbe.v1.1.chr10:99435212-99437565
+
proline-rich protein 2
proline-rich protein 2
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41260
Nbe.v1.1.chr10g41260.1
Nbe.v1.s00050g41260
Nbe.v1.1.chr10:140330945-140336355
+
Niben101Scf06305g02007.1
intracellular protein transporter USO1-like protein
NULL
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g20610
Nbe.v1.1.chr19g20610.1
Nbe.v1.s00060g20610
Nbe.v1.1.chr19:69153943-69156906
-
Niben101Scf03507g03009.1
MATE efflux family protein
MATE efflux family protein
Nbe.v1.1.chr19g24610
Nbe.v1.1.chr19g24610.1
Nbe.v1.s00060g24610
Nbe.v1.1.chr19:52724115-52734605
-
Niben101Scf10436g00001.1
cation exchanger 2
cation exchanger 2
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g25160
Nbe.v1.1.chr19g25160.1
Nbe.v1.s00060g25160
Nbe.v1.1.chr19:51279946-51282304
-
Niben101Scf00572g00003.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g36590
Nbe.v1.1.chr02g36590.1
Nbe.v1.s00090g36590
Nbe.v1.1.chr02:33668531-33702169
-
Niben101Scf14378g02005.1
RNA polymerase II transcription mediator
NULL
Nbe.v1.1.chr07g12650
Nbe.v1.1.chr07g12650.1
Nbe.v1.s00100g12650
Nbe.v1.1.chr07:87442352-87444796
-
Niben101Scf06183g04003.1
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Nbe.v1.1.chr07g14640
Nbe.v1.1.chr07g14640.1
Nbe.v1.s00100g14640
Nbe.v1.1.chr07:80614887-80616722
-
Niben101Scf11105g01014.1
Ribosomal protein S5/Elongation factor G/III/V family protein
NULL
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g24890
Nbe.v1.1.chr07g24890.1
Nbe.v1.s00100g24890
Nbe.v1.1.chr07:45713665-45717387
+
Niben101Scf01267g13008.1
lysine histidine transporter 1
lysine histidine transporter 1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g30040
Nbe.v1.1.chr18g30040.1
Nbe.v1.s00110g30040
Nbe.v1.1.chr18:40244786-40246312
+
Niben101Scf09107g02015.1
C2H2-like zinc finger protein
C2H2-like zinc finger protein
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g28020
Nbe.v1.1.chr13g28020.1
Nbe.v1.s00120g28020
Nbe.v1.1.chr13:83044015-83046741
+
Niben101Scf06737g00031.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr13g29320
Nbe.v1.1.chr13g29320.1
Nbe.v1.s00120g29320
Nbe.v1.1.chr13:86041676-86055811
+
Niben101Scf08018g00008.1
pantothenate kinase 2
pantothenate kinase 2
Nbe.v1.1.chr13g29670
Nbe.v1.1.chr13g29670.1
Nbe.v1.s00120g29670
Nbe.v1.1.chr13:87662672-87663181
+
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Nbe.v1.1.chr13g30550
Nbe.v1.1.chr13g30550.1
Nbe.v1.s00120g30550
Nbe.v1.1.chr13:89363724-89364630
-
Niben101Scf10994g00007.1
Phototropic-responsive NPH3 family protein
Phototropic-responsive NPH3 family protein
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g31140
Nbe.v1.1.chr14g31140.1
Nbe.v1.s00140g31140
Nbe.v1.1.chr14:33649446-33652275
-
Niben101Scf06902g00011.1
DNAJ heat shock N-terminal domain-containing protein
DNAJ heat shock N-terminal domain-containing protein
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g36800
Nbe.v1.1.chr14g36800.1
Nbe.v1.s00140g36800
Nbe.v1.1.chr14:15361610-15383053
-
Niben101Scf04748g02012.1
Transcriptional factor B3 family protein
Transcriptional factor B3 family protein
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g26560
Nbe.v1.1.chr03g26560.1
Nbe.v1.s00150g26560
Nbe.v1.1.chr03:93246688-93262428
+
Niben101Scf04083g01022.1
Glycogen/starch synthases%2C ADP-glucose type
Glycogen/starch synthases, ADP-glucose type
Nbe.v1.1.chr03g32870
Nbe.v1.1.chr03g32870.1
Nbe.v1.s00150g32870
Nbe.v1.1.chr03:107825762-107845441
+
Niben101Scf08018g00008.1
pantothenate kinase 2
pantothenate kinase 2
Nbe.v1.1.chr03g35660
Nbe.v1.1.chr03g35660.1
Nbe.v1.s00150g35660
Nbe.v1.1.chr03:113981175-113987350
+
Niben101Scf06977g00009.1
dentin sialophosphoprotein-like protein
NULL
Nbe.v1.1.chr01g07520
Nbe.v1.1.chr01g07520.1
Nbe.v1.s00160g07520
Nbe.v1.1.chr01:106827124-106827690
-
stress enhanced protein 1
stress enhanced protein 1
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g15430
Nbe.v1.1.chr01g15430.1
Nbe.v1.s00160g15430
Nbe.v1.1.chr01:76969599-76971819
-
Niben101Scf01612g03002.1
cytokinin oxidase/dehydrogenase 6
cytokinin oxidase/dehydrogenase 6
Nbe.v1.1.chr01g20160
Nbe.v1.1.chr01g20160.1
Nbe.v1.s00160g20160
Nbe.v1.1.chr01:61587485-61594164
+
Niben101Scf00201g01002.1
DNAJ heat shock N-terminal domain-containing protein
DNAJ heat shock N-terminal domain-containing protein
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g40950
Nbe.v1.1.chr01g40950.1
Nbe.v1.s00160g40950
Nbe.v1.1.chr01:11240835-11245462
-
Niben101Scf05749g00009.1
Phototropic-responsive NPH3 family protein
NULL
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g01460
Nbe.v1.1.chr11g01460.1
Nbe.v1.s00170g01460
Nbe.v1.1.chr11:127644926-127656326
-
Niben101Scf00270g16015.1
chloroplastidic phosphoglucan%2C water dikinase (ATGWD3)
catalytics;carbohydrate kinases;phosphoglucan, water dikinases
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g23450
Nbe.v1.1.chr11g23450.1
Nbe.v1.s00170g23450
Nbe.v1.1.chr11:68218187-68221229
+
Niben101Scf07103g03015.1
cytochrome P450%2C family 707%2C subfamily A%2C polypeptide 4
NULL
Nbe.v1.1.chr16g14110
Nbe.v1.1.chr16g14110.1
Nbe.v1.s00180g14110
Nbe.v1.1.chr16:120296322-120300233
+
cytochrome P450%2C family 79%2C subfamily B%2C polypeptide 3
cytochrome P450, family 79, subfamily B, polypeptide 3
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr15g43650
Nbe.v1.1.chr15g43650.1
Nbe.v1.s00210g11300
Nbe.v1.1.chr15:24825046-24826972
-
Niben101Scf01950g04012.1
regulator of nonsense transcript protein
NULL