N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 59

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g24860
Nbe.v1.1.chr17g24860.1
Nbe.v1.s00010g24860
Nbe.v1.1.chr17:101292502-101293086
+
Niben101Scf06467g05002.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Plant invertase/pectin methylesterase inhibitor superfamily protein
Nbe.v1.1.chr17g35640
Nbe.v1.1.chr17g35640.1
Nbe.v1.s00010g35640
Nbe.v1.1.chr17:61178143-61178400
-
Niben101Scf01108g01007.1
Pentatricopeptide repeat (PPR) superfamily protein
NULL
Nbe.v1.1.chr17g39710
Nbe.v1.1.chr17g39710.1
Nbe.v1.s00010g39710
Nbe.v1.1.chr17:44769886-44771102
+
Niben101Scf08737g00008.1
MuDR family transposase
NULL
Nbe.v1.1.chr06g25870
Nbe.v1.1.chr06g25870.1
Nbe.v1.s00020g25870
Nbe.v1.1.chr06:60057233-60058519
-
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr05g21200
Nbe.v1.1.chr05g21200.1
Nbe.v1.s00030g21200
Nbe.v1.1.chr05:72995149-72996721
-
Niben101Scf06089g00009.1
zinc knuckle (CCHC-type) family protein
zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr05g37400
Nbe.v1.1.chr05g37400.1
Nbe.v1.s00030g37400
Nbe.v1.1.chr05:137492861-137497462
-
Niben101Scf06467g05002.1
UDP-Glycosyltransferase superfamily protein
UDP-Glycosyltransferase superfamily protein
Nbe.v1.1.chr05g37750
Nbe.v1.1.chr05g37750.1
Nbe.v1.s00030g37750
Nbe.v1.1.chr05:139627408-139628121
+
Niben101Scf06467g05002.1
RAB GTPase homolog A6A
RAB GTPase homolog A6A
Nbe.v1.1.chr09g06280
Nbe.v1.1.chr09g06280.1
Nbe.v1.s00040g06280
Nbe.v1.1.chr09:128087815-128088171
+
Niben101Scf01784g08011.1
DEA(D/H)-box RNA helicase family protein
DEA(D/H)-box RNA helicase family protein
Nbe.v1.1.chr09g19080
Nbe.v1.1.chr09g19080.1
Nbe.v1.s00040g19080
Nbe.v1.1.chr09:83302872-83304951
+
Niben101Scf10189g01001.1
MuDR family transposase
NULL
Nbe.v1.1.chr09g19170
Nbe.v1.1.chr09g19170.1
Nbe.v1.s00040g19170
Nbe.v1.1.chr09:83155946-83157219
-
Niben101Scf02155g01016.1
RNA polymerase II transcription mediator
RNA polymerase II transcription mediators
Nbe.v1.1.chr09g23900
Nbe.v1.1.chr09g23900.1
Nbe.v1.s00040g23900
Nbe.v1.1.chr09:67734801-67735792
-
Niben101Scf00369g09028.1
MuDR family transposase
NULL
Nbe.v1.1.chr09g34510
Nbe.v1.1.chr09g34510.1
Nbe.v1.s00040g34510
Nbe.v1.1.chr09:31391810-31393005
+
Niben101Scf00751g06010.1
MuDR family transposase
NULL
Nbe.v1.1.chr10g24780
Nbe.v1.1.chr10g24780.1
Nbe.v1.s00050g24780
Nbe.v1.1.chr10:83829018-83829895
-
Niben101Scf02155g01016.1
serine/threonine-protein phosphatase 4 regulatory subunit-like protein
NULL
Nbe.v1.1.chr10g35460
Nbe.v1.1.chr10g35460.1
Nbe.v1.s00050g35460
Nbe.v1.1.chr10:122807456-122807920
-
Niben101Scf02155g01016.1
TOPLESS-related 1
NULL
Nbe.v1.1.chr19g34710
Nbe.v1.1.chr19g34710.1
Nbe.v1.s00060g34710
Nbe.v1.1.chr19:28560640-28560909
-
Niben101Scf08737g00008.1
EAP30/Vps36 family protein
NULL
Nbe.v1.1.chr12g37400
Nbe.v1.1.chr12g37400.1
Nbe.v1.s00070g37400
Nbe.v1.1.chr12:20734079-20734408
+
phosphate transporter 1%3B4
phosphate transporter 1;4
Nbe.v1.1.chr08g01200
Nbe.v1.1.chr08g01200.1
Nbe.v1.s00080g01200
Nbe.v1.1.chr08:3309292-3309801
+
Niben101Scf00751g06010.1
RNA polymerase II transcription mediator
RNA polymerase II transcription mediators
Nbe.v1.1.chr08g03470
Nbe.v1.1.chr08g03470.1
Nbe.v1.s00080g03470
Nbe.v1.1.chr08:10191247-10192418
+
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr08g25190
Nbe.v1.1.chr08g25190.1
Nbe.v1.s00080g25190
Nbe.v1.1.chr08:90120540-90121752
+
Niben101Scf06467g05002.1
UDP-glucosyl transferase 71B1
UDP-glucosyl transferase 71B1
Nbe.v1.1.chr02g04270
Nbe.v1.1.chr02g04270.1
Nbe.v1.s00090g04270
Nbe.v1.1.chr02:134323176-134324390
-
Niben101Scf06467g05002.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr02g07990
Nbe.v1.1.chr02g07990.1
Nbe.v1.s00090g07990
Nbe.v1.1.chr02:126029415-126030095
-
Niben101Scf00751g06010.1
ENTH/ANTH/VHS superfamily protein
ENTH/ANTH/VHS superfamily protein
Nbe.v1.1.chr02g26310
Nbe.v1.1.chr02g26310.1
Nbe.v1.s00090g26310
Nbe.v1.1.chr02:77217403-77218295
+
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr02g28220
Nbe.v1.1.chr02g28220.1
Nbe.v1.s00090g28220
Nbe.v1.1.chr02:70897746-70898667
+
Niben101Scf00180g05009.1
MuDR family transposase
NULL
Nbe.v1.1.chr02g30100
Nbe.v1.1.chr02g30100.1
Nbe.v1.s00090g30100
Nbe.v1.1.chr02:64704774-64705708
+
Niben101Scf02155g01016.1
Plant protein 1589 of unknown function
Plant protein 1589 of unknown function
Nbe.v1.1.chr02g41410
Nbe.v1.1.chr02g41410.1
Nbe.v1.s00090g41410
Nbe.v1.1.chr02:14468853-14470074
+
Niben101Scf06467g05002.1
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Nbe.v1.1.chr02g44370
Nbe.v1.1.chr02g44370.1
Nbe.v1.s00090g44370
Nbe.v1.1.chr02:1130042-1130801
-
Niben101Scf06467g05002.1
serine/arginine repetitive matrix-like protein
NULL
Nbe.v1.1.chr07g02610
Nbe.v1.1.chr07g02610.1
Nbe.v1.s00100g02610
Nbe.v1.1.chr07:134975049-134980526
-
Dihydrolipoamide acetyltransferase%2C long form protein
Dihydrolipoamide acetyltransferase, long form protein
Nbe.v1.1.chr07g09680
Nbe.v1.1.chr07g09680.1
Nbe.v1.s00100g09680
Nbe.v1.1.chr07:103057888-103059175
+
Niben101Scf00751g06010.1
MuDR family transposase
NULL
Nbe.v1.1.chr07g12840
Nbe.v1.1.chr07g12840.1
Nbe.v1.s00100g12840
Nbe.v1.1.chr07:86976920-86977285
-
Niben101Scf06467g05002.1
myb domain protein 118
myb domain protein 118
Nbe.v1.1.chr18g08310
Nbe.v1.1.chr18g08310.1
Nbe.v1.s00110g08310
Nbe.v1.1.chr18:115191895-115193017
-
Niben101Scf10189g01001.1
MuDR family transposase
NULL
Nbe.v1.1.chr18g12690
Nbe.v1.1.chr18g12690.1
Nbe.v1.s00110g12690
Nbe.v1.1.chr18:100023065-100023523
+
Niben101Scf06467g05002.1
Cystathionine beta-synthase (CBS) family protein
Cystathionine beta-synthase (CBS) family protein
Nbe.v1.1.chr18g20180
Nbe.v1.1.chr18g20180.1
Nbe.v1.s00110g20180
Nbe.v1.1.chr18:72896736-72898465
-
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr18g36910
Nbe.v1.1.chr18g36910.1
Nbe.v1.s00110g36910
Nbe.v1.1.chr18:17462853-17464954
-
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr13g04550
Nbe.v1.1.chr13g04550.1
Nbe.v1.s00120g04550
Nbe.v1.1.chr13:15016520-15017694
-
Niben101Scf00751g06010.1
MuDR family transposase
NULL
Nbe.v1.1.chr13g04640
Nbe.v1.1.chr13g04640.1
Nbe.v1.s00120g04640
Nbe.v1.1.chr13:15501484-15501879
+
Niben101Scf10189g01001.1
NagB/RpiA/CoA transferase-like superfamily protein
NagB/RpiA/CoA transferase-like superfamily protein
Nbe.v1.1.chr13g13900
Nbe.v1.1.chr13g13900.1
Nbe.v1.s00120g13900
Nbe.v1.1.chr13:40558892-40560186
+
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr13g22880
Nbe.v1.1.chr13g22880.1
Nbe.v1.s00120g22880
Nbe.v1.1.chr13:70561807-70562271
+
Niben101Scf02155g01016.1
MICOS complex subunit Mic10-like protein (DUF543)
Domain of unknown function (DUF543)
Nbe.v1.1.chr13g38600
Nbe.v1.1.chr13g38600.1
Nbe.v1.s00120g38600
Nbe.v1.1.chr13:108792996-108794989
-
Niben101Scf06467g05002.1
Heavy metal transport/detoxification superfamily protein
Heavy metal transport/detoxification superfamily protein
Nbe.v1.1.chr13g41280
Nbe.v1.1.chr13g41280.1
Nbe.v1.s00120g41280
Nbe.v1.1.chr13:116184631-116189249
+
Niben101Scf06467g05002.1
histone acetyltransferase of the CBP family 5
histone acetyltransferase of the CBP family 5
Nbe.v1.1.chr04g09090
Nbe.v1.1.chr04g09090.1
Nbe.v1.s00130g09090
Nbe.v1.1.chr04:89436873-89437732
-
ovate family protein 13
ovate family protein 13
Nbe.v1.1.chr04g25520
Nbe.v1.1.chr04g25520.1
Nbe.v1.s00130g25520
Nbe.v1.1.chr04:28812334-28813135
-
Niben101Scf06467g05002.1
UDP-glucosyl transferase 71B1
UDP-glucosyl transferase 71B1
Nbe.v1.1.chr03g29150
Nbe.v1.1.chr03g29150.1
Nbe.v1.s00150g29150
Nbe.v1.1.chr03:100108656-100109509
-
Niben101Scf02155g01016.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Plant invertase/pectin methylesterase inhibitor superfamily protein
Nbe.v1.1.chr03g30750
Nbe.v1.1.chr03g30750.1
Nbe.v1.s00150g30750
Nbe.v1.1.chr03:103433378-103434207
-
Niben101Scf02155g01016.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr03g31050
Nbe.v1.1.chr03g31050.1
Nbe.v1.s00150g31050
Nbe.v1.1.chr03:104184449-104185611
+
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr03g35680
Nbe.v1.1.chr03g35680.1
Nbe.v1.s00150g35680
Nbe.v1.1.chr03:114033467-114033787
+
Niben101Scf10189g01001.1
cytochrome c oxidase 10
cytochrome c oxidase 10
Nbe.v1.1.chr01g05570
Nbe.v1.1.chr01g05570.1
Nbe.v1.s00160g05570
Nbe.v1.1.chr01:114054012-114055148
+
Niben101Scf10189g01001.1
MuDR family transposase
NULL
Nbe.v1.1.chr01g10650
Nbe.v1.1.chr01g10650.1
Nbe.v1.s00160g10650
Nbe.v1.1.chr01:95560521-95560772
-
high affinity K+ transporter 5
high affinity K+ transporter 5
Nbe.v1.1.chr01g20350
Nbe.v1.1.chr01g20350.1
Nbe.v1.s00160g20350
Nbe.v1.1.chr01:61211212-61212188
-
Niben101Scf00369g09028.1
MuDR family transposase
NULL
Nbe.v1.1.chr01g29200
Nbe.v1.1.chr01g29200.1
Nbe.v1.s00160g29200
Nbe.v1.1.chr01:38196396-38197308
-
Niben101Scf00369g09028.1
transcriptional coactivator p15 (PC4) family protein (KELP)
transcriptional coactivator p15 (PC4) family protein (KELP)
Nbe.v1.1.chr01g36500
Nbe.v1.1.chr01g36500.1
Nbe.v1.s00160g36500
Nbe.v1.1.chr01:21579087-21580256
-
Niben101Scf06467g05002.1
MuDR family transposase
NULL
Nbe.v1.1.chr01g45650
Nbe.v1.1.chr01g45650.1
Nbe.v1.s00160g45650
Nbe.v1.1.chr01:1026048-1027017
-
Niben101Scf06467g05002.1
DUF1005 family protein (DUF1005)
NULL
Nbe.v1.1.chr11g07190
Nbe.v1.1.chr11g07190.1
Nbe.v1.s00170g07190
Nbe.v1.1.chr11:110989817-110990658
+
Niben101Scf06467g05002.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Plant invertase/pectin methylesterase inhibitor superfamily protein
Nbe.v1.1.chr11g25140
Nbe.v1.1.chr11g25140.1
Nbe.v1.s00170g25140
Nbe.v1.1.chr11:59759650-59760858
-
Niben101Scf02155g01016.1
MuDR family transposase
NULL
Nbe.v1.1.chr11g27750
Nbe.v1.1.chr11g27750.1
Nbe.v1.s00170g27750
Nbe.v1.1.chr11:50603109-50606929
-
Niben101Scf10189g01001.1
Calcium-binding EF-hand family protein
NULL
Nbe.v1.1.chr11g39000
Nbe.v1.1.chr11g39000.1
Nbe.v1.s00170g39000
Nbe.v1.1.chr11:13374717-13378781
-
Niben101Scf00332g00007.1
Ppx-GppA phosphatase
NULL
Nbe.v1.1.chr16g21450
Nbe.v1.1.chr16g21450.1
Nbe.v1.s00180g21450
Nbe.v1.1.chr16:150130824-150132070
-
Niben101Scf00369g09028.1
No description
Nbe.v1.1.chr16g22630
Nbe.v1.1.chr16g22630.1
Nbe.v1.s00180g22630
Nbe.v1.1.chr16:154256501-154257529
+
Niben101Scf08737g00008.1
NagB/RpiA/CoA transferase-like superfamily protein
NagB/RpiA/CoA transferase-like superfamily protein
Nbe.v1.1.chr16g42080
Nbe.v1.1.chr16g42080.1
Nbe.v1.s00200g10670
Nbe.v1.1.chr16:28522007-28523223
-
Niben101Scf01784g08011.1
MuDR family transposase
NULL
Nbe.v1.1.chr15g47380
Nbe.v1.1.chr15g47380.1
Nbe.v1.s00210g15030
Nbe.v1.1.chr15:10928424-10929645
-
Niben101Scf01784g08011.1
MuDR family transposase
NULL