N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 74

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g14490
Nbe.v1.1.chr17g14490.1
Nbe.v1.s00010g14490
Nbe.v1.1.chr17:143324318-143333863
+
Niben101Scf17324g00004.1
Oxidoreductase family protein
Oxidoreductase family protein
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr17g27300
Nbe.v1.1.chr17g27300.1
Nbe.v1.s00010g27300
Nbe.v1.1.chr17:92845303-92845884
+
Niben101Scf01765g02005.1
multidrug resistance-associated protein 10
multidrug resistance-associated protein 10
Nbe.v1.1.chr06g08450
Nbe.v1.1.chr06g08450.1
Nbe.v1.s00020g08450
Nbe.v1.1.chr06:124928916-124929767
-
Mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein
Nbe.v1.1.chr06g26920
Nbe.v1.1.chr06g26920.1
Nbe.v1.s00020g26920
Nbe.v1.1.chr06:56747419-56750268
+
Niben101Scf03135g00003.1
Disease resistance protein (CC-NBS-LRR class) family
NULL
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g06370
Nbe.v1.1.chr05g06370.1
Nbe.v1.s00030g06370
Nbe.v1.1.chr05:23352388-23374469
-
Niben101Scf06397g04016.1
valyl-tRNA synthetase / valine-tRNA ligase (VALRS)
valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
Nbe.v1.1.chr05g29030
Nbe.v1.1.chr05g29030.1
Nbe.v1.s00030g29030
Nbe.v1.1.chr05:103498462-103506578
-
Niben101Scf08304g04006.1
cobalt ion binding protein
cobalt ion binding
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g00620
Nbe.v1.1.chr09g00620.1
Nbe.v1.s00040g00620
Nbe.v1.1.chr09:144242957-144243226
-
response regulator 12
response regulator 12
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g31090
Nbe.v1.1.chr09g31090.1
Nbe.v1.s00040g31090
Nbe.v1.1.chr09:43900595-43906477
+
Niben101Scf05942g01011.1
zinc ion binding protein
NULL
Nbe.v1.1.chr09g39010
Nbe.v1.1.chr09g39010.1
Nbe.v1.s00040g39010
Nbe.v1.1.chr09:15640640-15642082
-
methionine synthase 2
methionine synthase 2
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g27420
Nbe.v1.1.chr19g27420.1
Nbe.v1.s00060g27420
Nbe.v1.1.chr19:45909709-45912544
+
Niben101Scf25768g00010.1
Malectin/receptor-like protein kinase family protein
Malectin/receptor-like protein kinase family protein
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g02220
Nbe.v1.1.chr12g02220.1
Nbe.v1.s00070g02220
Nbe.v1.1.chr12:136484395-136485255
+
Niben101Scf06444g01002.1
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Nbe.v1.1.chr12g16760
Nbe.v1.1.chr12g16760.1
Nbe.v1.s00070g16760
Nbe.v1.1.chr12:81706174-81707242
+
Niben101Scf00096g06002.1
Beige/BEACH and WD40 domain-containing protein
NULL
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g37230
Nbe.v1.1.chr12g37230.1
Nbe.v1.s00070g37230
Nbe.v1.1.chr12:21534684-21546993
+
Niben101Scf02544g00001.1
endonuclease/exonuclease/phosphatase family protein
endonuclease/exonuclease/phosphatase family protein
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g19540
Nbe.v1.1.chr02g19540.1
Nbe.v1.s00090g19540
Nbe.v1.1.chr02:99316206-99321232
+
Niben101Scf07250g02003.1
ascorbate peroxidase 3
ascorbate peroxidase 3
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g31760
Nbe.v1.1.chr07g31760.1
Nbe.v1.s00100g31760
Nbe.v1.1.chr07:19379186-19385120
+
Niben101Scf01213g00005.1
homeobox protein knotted-1-like 3
KNOTTED1-like homeobox gene 3
Nbe.v1.1.chr18g06620
Nbe.v1.1.chr18g06620.1
Nbe.v1.s00110g06620
Nbe.v1.1.chr18:121242147-121243756
+
Niben101Scf01765g02005.1
multidrug resistance-associated protein 10
multidrug resistance-associated protein 10
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g24970
Nbe.v1.1.chr18g24970.1
Nbe.v1.s00110g24970
Nbe.v1.1.chr18:56725521-56730610
+
F-box family protein
F-box family protein
Nbe.v1.1.chr18g34810
Nbe.v1.1.chr18g34810.1
Nbe.v1.s00110g34810
Nbe.v1.1.chr18:25421294-25429243
+
Niben101Scf34696g00001.1
UDP-N-acetylglucosamine transferase subunit ALG14-like protein
NULL
Nbe.v1.1.chr18g37960
Nbe.v1.1.chr18g37960.1
Nbe.v1.s00110g37960
Nbe.v1.1.chr18:13563493-13563930
-
Niben101Scf00912g04004.1
Ribosomal S17 family protein
Ribosomal S17 family protein
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g30880
Nbe.v1.1.chr14g30880.1
Nbe.v1.s00140g30880
Nbe.v1.1.chr14:34424761-34427925
-
hypothetical protein
NULL
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g42400
Nbe.v1.1.chr14g42400.1
Nbe.v1.s00140g42400
Nbe.v1.1.chr14:376549-377076
-
Niben101Scf01765g02005.1
RNA helicase family protein
RNA helicase family protein
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g22070
Nbe.v1.1.chr03g22070.1
Nbe.v1.s00150g22070
Nbe.v1.1.chr03:80296775-80303412
+
Niben101Scf01765g02005.1
No description
Nbe.v1.1.chr03g32900
Nbe.v1.1.chr03g32900.1
Nbe.v1.s00150g32900
Nbe.v1.1.chr03:108013067-108014819
-
Niben101Scf05551g03011.1
Dof-type zinc finger DNA-binding family protein
Dof-type zinc finger DNA-binding family protein
Nbe.v1.1.chr01g05370
Nbe.v1.1.chr01g05370.1
Nbe.v1.s00160g05370
Nbe.v1.1.chr01:114564978-114566087
-
Pectin lyase-like superfamily protein
Pectin lyase-like superfamily protein
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g21140
Nbe.v1.1.chr01g21140.1
Nbe.v1.s00160g21140
Nbe.v1.1.chr01:58799904-58802351
+
Niben101Scf01082g01002.1
cotton fiber protein
NULL
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g35090
Nbe.v1.1.chr01g35090.1
Nbe.v1.s00160g35090
Nbe.v1.1.chr01:24849647-24858845
-
Niben101Scf09512g03003.1
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g11040
Nbe.v1.1.chr11g11040.1
Nbe.v1.s00170g11040
Nbe.v1.1.chr11:99873165-99877119
+
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr16g12420
Nbe.v1.1.chr16g12420.1
Nbe.v1.s00180g12420
Nbe.v1.1.chr16:114278758-114280459
-
mediator of RNA polymerase II transcription subunit
NULL
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr16g33880
Nbe.v1.1.chr16g33880.1
Nbe.v1.s00200g02470
Nbe.v1.1.chr16:5886317-5886637
+
Pectin lyase-like superfamily protein
Pectin lyase-like superfamily protein
Nbe.v1.1.chr15g33150
Nbe.v1.1.chr15g33150.1
Nbe.v1.s00210g00800
Nbe.v1.1.chr15:63966864-63970536
-
Niben101Scf01371g03013.1
hypothetical protein
NULL
Nbe.v1.1.chr15g38850
Nbe.v1.1.chr15g38850.1
Nbe.v1.s00210g06500
Nbe.v1.1.chr15:44996413-44997745
+
Niben101Scf01765g02005.1
purple acid phosphatase 26
purple acid phosphatase 26