N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 78

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g12200
Nbe.v1.1.chr17g12200.1
Nbe.v1.s00010g12200
Nbe.v1.1.chr17:150022316-150022921
-
Niben101Scf13206g02017.1
Thioesterase superfamily protein
Thioesterase superfamily protein
Nbe.v1.1.chr17g21340
Nbe.v1.1.chr17g21340.1
Nbe.v1.s00010g21340
Nbe.v1.1.chr17:114271299-114272547
-
Niben101Scf04044g22008.1
hypothetical protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr17g29300
Nbe.v1.1.chr17g29300.1
Nbe.v1.s00010g29300
Nbe.v1.1.chr17:86968309-86969335
+
Niben101Scf07532g02017.1
ribosomal protein S13A
ribosomal protein S13A
Nbe.v1.1.chr06g02710
Nbe.v1.1.chr06g02710.1
Nbe.v1.s00020g02710
Nbe.v1.1.chr06:143842821-143851544
+
Niben101Scf03702g04011.1
Disease resistance protein (CC-NBS-LRR class) family
NULL
Nbe.v1.1.chr06g05910
Nbe.v1.1.chr06g05910.1
Nbe.v1.s00020g05910
Nbe.v1.1.chr06:134102883-134105005
+
Niben101Scf07854g02001.1
XH domain-containing protein
XH domain-containing protein
Nbe.v1.1.chr06g11300
Nbe.v1.1.chr06g11300.1
Nbe.v1.s00020g11300
Nbe.v1.1.chr06:114463296-114463655
-
Niben101Scf00602g00006.1
transmembrane protein
NULL
Nbe.v1.1.chr06g29770
Nbe.v1.1.chr06g29770.1
Nbe.v1.s00020g29770
Nbe.v1.1.chr06:46881932-46882186
-
Niben101Scf07854g02001.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Nbe.v1.1.chr05g21330
Nbe.v1.1.chr05g21330.1
Nbe.v1.s00030g21330
Nbe.v1.1.chr05:73435872-73437067
-
Niben101Scf02744g01010.1
cyclin-dependent kinase%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr05g25970
Nbe.v1.1.chr05g25970.1
Nbe.v1.s00030g25970
Nbe.v1.1.chr05:90488367-90490530
+
Niben101Scf00182g06002.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr05g26660
Nbe.v1.1.chr05g26660.1
Nbe.v1.s00030g26660
Nbe.v1.1.chr05:93616497-93617467
-
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Nbe.v1.1.chr09g08710
Nbe.v1.1.chr09g08710.1
Nbe.v1.s00040g08710
Nbe.v1.1.chr09:119271486-119272935
+
Niben101Scf00028g00002.1
NAD(P)H-quinone oxidoreductase subunit%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr09g09390
Nbe.v1.1.chr09g09390.1
Nbe.v1.s00040g09390
Nbe.v1.1.chr09:116831612-116832841
+
Niben101Scf07854g02001.1
No description
Nbe.v1.1.chr09g12540
Nbe.v1.1.chr09g12540.1
Nbe.v1.s00040g12540
Nbe.v1.1.chr09:106036066-106036644
+
Niben101Scf02060g08010.1
DUF581 family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr09g18160
Nbe.v1.1.chr09g18160.1
Nbe.v1.s00040g18160
Nbe.v1.1.chr09:85714985-85717450
+
Niben101Scf03456g00004.1
Subtilase family protein
Subtilase family protein
Nbe.v1.1.chr09g27560
Nbe.v1.1.chr09g27560.1
Nbe.v1.s00040g27560
Nbe.v1.1.chr09:56725845-56726909
-
Niben101Scf01526g12009.1
hypothetical protein (DUF581)
NULL
Nbe.v1.1.chr09g35160
Nbe.v1.1.chr09g35160.1
Nbe.v1.s00040g35160
Nbe.v1.1.chr09:29499237-29503455
+
Niben101Scf04515g00008.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr10g02420
Nbe.v1.1.chr10g02420.1
Nbe.v1.s00050g02420
Nbe.v1.1.chr10:6491527-6491823
-
Zinc knuckle (CCHC-type) family protein
Zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr10g12090
Nbe.v1.1.chr10g12090.1
Nbe.v1.s00050g12090
Nbe.v1.1.chr10:40297774-40301539
-
Niben101Scf05839g00001.1
integral membrane protein (Protein of unknown function DUF92%2C transmembrane)
Protein of unknown function DUF92, transmembrane
Nbe.v1.1.chr10g13510
Nbe.v1.1.chr10g13510.1
Nbe.v1.s00050g13510
Nbe.v1.1.chr10:46164385-46165199
-
Niben101Scf02460g06009.1
cyclin-dependent kinase%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr10g14600
Nbe.v1.1.chr10g14600.1
Nbe.v1.s00050g14600
Nbe.v1.1.chr10:50989750-50990258
+
Niben101Scf07854g02001.1
SEC7-like guanine nucleotide exchange family protein
NULL
Nbe.v1.1.chr10g19420
Nbe.v1.1.chr10g19420.1
Nbe.v1.s00050g19420
Nbe.v1.1.chr10:67096789-67097971
-
Niben101Scf08259g01002.1
histone mono-ubiquitination 1
NULL
Nbe.v1.1.chr10g20450
Nbe.v1.1.chr10g20450.1
Nbe.v1.s00050g20450
Nbe.v1.1.chr10:70101945-70104183
+
Niben101Scf02023g01005.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr10g22550
Nbe.v1.1.chr10g22550.1
Nbe.v1.s00050g22550
Nbe.v1.1.chr10:75978395-75979988
-
Niben101Scf08259g01002.1
histone mono-ubiquitination 1
NULL
Nbe.v1.1.chr10g25070
Nbe.v1.1.chr10g25070.1
Nbe.v1.s00050g25070
Nbe.v1.1.chr10:84996327-84997789
+
Niben101Scf01485g02014.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr10g30940
Nbe.v1.1.chr10g30940.1
Nbe.v1.s00050g30940
Nbe.v1.1.chr10:104687359-104688535
-
Niben101Scf06771g00004.1
DUF581 family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr10g39560
Nbe.v1.1.chr10g39560.1
Nbe.v1.s00050g39560
Nbe.v1.1.chr10:135146089-135146526
+
Niben101Scf08998g00004.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr19g15620
Nbe.v1.1.chr19g15620.1
Nbe.v1.s00060g15620
Nbe.v1.1.chr19:86840214-86842214
+
Niben101Scf28115g00001.1
receptor lectin kinase
receptor lectin kinase
Nbe.v1.1.chr12g00550
Nbe.v1.1.chr12g00550.1
Nbe.v1.s00070g00550
Nbe.v1.1.chr12:142623976-142625390
-
Niben101Scf01252g03001.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr12g05300
Nbe.v1.1.chr12g05300.1
Nbe.v1.s00070g05300
Nbe.v1.1.chr12:123598408-123599968
+
Niben101Scf13146g00034.1
RmlC-like cupins superfamily protein
RmlC-like cupins superfamily protein
Nbe.v1.1.chr12g08290
Nbe.v1.1.chr12g08290.1
Nbe.v1.s00070g08290
Nbe.v1.1.chr12:113490992-113496891
-
Niben101Scf08259g01002.1
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Nbe.v1.1.chr12g12650
Nbe.v1.1.chr12g12650.1
Nbe.v1.s00070g12650
Nbe.v1.1.chr12:97443805-97445966
+
Niben101Scf06016g08007.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr12g27180
Nbe.v1.1.chr12g27180.1
Nbe.v1.s00070g27180
Nbe.v1.1.chr12:50845782-50849812
-
Niben101Scf03969g04003.1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Nbe.v1.1.chr12g28110
Nbe.v1.1.chr12g28110.1
Nbe.v1.s00070g28110
Nbe.v1.1.chr12:48836354-48840353
-
Niben101Scf03076g02004.1
Single hybrid motif superfamily protein
Single hybrid motif superfamily protein
Nbe.v1.1.chr12g33610
Nbe.v1.1.chr12g33610.1
Nbe.v1.s00070g33610
Nbe.v1.1.chr12:33034706-33035146
+
Niben101Scf07854g02001.1
transporter associated with antigen processing protein 1
NULL
Nbe.v1.1.chr08g29490
Nbe.v1.1.chr08g29490.1
Nbe.v1.s00080g29490
Nbe.v1.1.chr08:107107673-107110711
+
Niben101Scf08259g01002.1
Myosin heavy chain-related protein
Myosin heavy chain-related protein
Nbe.v1.1.chr08g37630
Nbe.v1.1.chr08g37630.1
Nbe.v1.s00080g37630
Nbe.v1.1.chr08:136217499-136219588
+
transducin family protein / WD-40 repeat family protein
transducin family protein / WD-40 repeat family protein
Nbe.v1.1.chr02g06890
Nbe.v1.1.chr02g06890.1
Nbe.v1.s00090g06890
Nbe.v1.1.chr02:128215950-128216699
+
Copia-like polyprotein/retrotransposon
NULL
Nbe.v1.1.chr02g13430
Nbe.v1.1.chr02g13430.1
Nbe.v1.s00090g13430
Nbe.v1.1.chr02:114247028-114250584
-
Niben101Scf00271g04029.1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Nbe.v1.1.chr02g14210
Nbe.v1.1.chr02g14210.1
Nbe.v1.s00090g14210
Nbe.v1.1.chr02:112750339-112753386
-
Niben101Scf01125g01006.1
Single hybrid motif superfamily protein
Single hybrid motif superfamily protein
Nbe.v1.1.chr02g41970
Nbe.v1.1.chr02g41970.1
Nbe.v1.s00090g41970
Nbe.v1.1.chr02:12484399-12486874
+
Niben101Scf06016g08007.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr07g06640
Nbe.v1.1.chr07g06640.1
Nbe.v1.s00100g06640
Nbe.v1.1.chr07:119310328-119316450
-
Niben101Scf05711g00001.1
SET domain protein 38
SET domain protein 38
Nbe.v1.1.chr07g12480
Nbe.v1.1.chr07g12480.1
Nbe.v1.s00100g12480
Nbe.v1.1.chr07:87945687-87946652
-
Niben101Scf07854g02001.1
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Nbe.v1.1.chr07g26850
Nbe.v1.1.chr07g26850.1
Nbe.v1.s00100g26850
Nbe.v1.1.chr07:38395348-38398906
-
Niben101Scf01673g03001.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr07g30350
Nbe.v1.1.chr07g30350.1
Nbe.v1.s00100g30350
Nbe.v1.1.chr07:24676751-24678642
-
Niben101Scf07854g02001.1
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Nbe.v1.1.chr18g00200
Nbe.v1.1.chr18g00200.1
Nbe.v1.s00110g00200
Nbe.v1.1.chr18:141125073-141133793
-
Niben101Scf07854g02001.1
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Nbe.v1.1.chr18g00230
Nbe.v1.1.chr18g00230.1
Nbe.v1.s00110g00230
Nbe.v1.1.chr18:141101210-141103260
-
Niben101Scf07854g02001.1
Trypsin family protein with PDZ domain-containing protein
Trypsin family protein with PDZ domain
Nbe.v1.1.chr18g02960
Nbe.v1.1.chr18g02960.1
Nbe.v1.s00110g02960
Nbe.v1.1.chr18:132840408-132841487
+
Niben101Scf08651g02001.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr18g14900
Nbe.v1.1.chr18g14900.1
Nbe.v1.s00110g14900
Nbe.v1.1.chr18:92348944-92349950
-
Zinc knuckle (CCHC-type) family protein
Zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr13g00240
Nbe.v1.1.chr13g00240.1
Nbe.v1.s00120g00240
Nbe.v1.1.chr13:662178-666051
+
Niben101Scf01409g00016.1
Auxin efflux carrier family protein
Auxin efflux carrier family protein
Nbe.v1.1.chr13g06710
Nbe.v1.1.chr13g06710.1
Nbe.v1.s00120g06710
Nbe.v1.1.chr13:23045808-23046128
-
Niben101Scf08259g01002.1
Myosin heavy chain-related protein
Myosin heavy chain-related protein
Nbe.v1.1.chr13g08930
Nbe.v1.1.chr13g08930.1
Nbe.v1.s00120g08930
Nbe.v1.1.chr13:28834002-28836446
+
Niben101Scf04159g00003.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr13g15970
Nbe.v1.1.chr13g15970.1
Nbe.v1.s00120g15970
Nbe.v1.1.chr13:49551064-49554003
+
Niben101Scf04926g06003.1
translocon at the outer envelope membrane of chloroplasts 34
translocon at the outer envelope membrane of chloroplasts 34
Nbe.v1.1.chr13g23110
Nbe.v1.1.chr13g23110.1
Nbe.v1.s00120g23110
Nbe.v1.1.chr13:71017933-71018958
+
Replication factor-A protein 1-like protein
Replication factor-A protein 1-related
Nbe.v1.1.chr13g33970
Nbe.v1.1.chr13g33970.1
Nbe.v1.s00120g33970
Nbe.v1.1.chr13:96697621-96697983
-
Zinc knuckle (CCHC-type) family protein
Zinc knuckle (CCHC-type) family protein
Nbe.v1.1.chr04g12910
Nbe.v1.1.chr04g12910.1
Nbe.v1.s00130g12910
Nbe.v1.1.chr04:73461165-73464079
+
Niben101Scf08259g01002.1
BCL-2-associated athanogene 6
BCL-2-associated athanogene 6
Nbe.v1.1.chr04g19510
Nbe.v1.1.chr04g19510.1
Nbe.v1.s00130g19510
Nbe.v1.1.chr04:49553489-49554379
-
Niben101Scf00630g00004.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr04g28410
Nbe.v1.1.chr04g28410.1
Nbe.v1.s00130g28410
Nbe.v1.1.chr04:17680396-17681863
-
Niben101Scf08259g01002.1
Remorin family protein
Remorin family protein
Nbe.v1.1.chr14g02920
Nbe.v1.1.chr14g02920.1
Nbe.v1.s00140g02920
Nbe.v1.1.chr14:122278170-122279069
+
Niben101Scf06375g04001.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr14g19750
Nbe.v1.1.chr14g19750.1
Nbe.v1.s00140g19750
Nbe.v1.1.chr14:68412582-68420922
+
Niben101Scf01818g04009.1
sirtuin 2
sirtuin 2
Nbe.v1.1.chr14g22510
Nbe.v1.1.chr14g22510.1
Nbe.v1.s00140g22510
Nbe.v1.1.chr14:61088624-61089383
-
ABC transporter family protein
ABC transporter family protein
Nbe.v1.1.chr14g30300
Nbe.v1.1.chr14g30300.1
Nbe.v1.s00140g30300
Nbe.v1.1.chr14:36099966-36102080
+
Niben101Scf05855g04003.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr14g31250
Nbe.v1.1.chr14g31250.1
Nbe.v1.s00140g31250
Nbe.v1.1.chr14:33060469-33061038
+
Niben101Scf04904g00002.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr14g34400
Nbe.v1.1.chr14g34400.1
Nbe.v1.s00140g34400
Nbe.v1.1.chr14:23896752-23897424
+
Niben101Scf15496g00007.1
hypothetical protein (DUF581)
NULL
Nbe.v1.1.chr03g01140
Nbe.v1.1.chr03g01140.1
Nbe.v1.s00150g01140
Nbe.v1.1.chr03:2831574-2834924
+
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr03g01270
Nbe.v1.1.chr03g01270.1
Nbe.v1.s00150g01270
Nbe.v1.1.chr03:3042392-3042833
+
Niben101Scf00870g03003.1
linoleate 9S-lipoxygenase-4 protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr03g12090
Nbe.v1.1.chr03g12090.1
Nbe.v1.s00150g12090
Nbe.v1.1.chr03:41995310-42005783
-
Niben101Scf04422g03002.1
SET domain protein 38
SET domain protein 38
Nbe.v1.1.chr03g20390
Nbe.v1.1.chr03g20390.1
Nbe.v1.s00150g20390
Nbe.v1.1.chr03:75172060-75178560
+
Niben101Scf02015g07021.1
evolutionarily conserved C-terminal region 2
evolutionarily conserved C-terminal region 2
Nbe.v1.1.chr03g43450
Nbe.v1.1.chr03g43450.1
Nbe.v1.s00150g43450
Nbe.v1.1.chr03:130466657-130467212
-
Niben101Scf02749g05043.1
linoleate 9S-lipoxygenase-4 protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr01g05250
Nbe.v1.1.chr01g05250.1
Nbe.v1.s00160g05250
Nbe.v1.1.chr01:114978935-114984054
-
Niben101Scf00177g08006.1
S-locus lectin protein kinase family protein
NULL
Nbe.v1.1.chr01g08870
Nbe.v1.1.chr01g08870.1
Nbe.v1.s00160g08870
Nbe.v1.1.chr01:102494407-102496020
+
Niben101Scf06017g00002.1
phosphate transporter 1%3B4
phosphate transporter 1;4
Nbe.v1.1.chr01g19990
Nbe.v1.1.chr01g19990.1
Nbe.v1.s00160g19990
Nbe.v1.1.chr01:62268999-62269639
-
Niben101Scf07639g02005.1
senescence-associated family protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr11g03040
Nbe.v1.1.chr11g03040.1
Nbe.v1.s00170g03040
Nbe.v1.1.chr11:123348563-123375286
-
Niben101Scf04776g01027.1
REF4-related 1
REF4-related 1
Nbe.v1.1.chr11g03870
Nbe.v1.1.chr11g03870.1
Nbe.v1.s00170g03870
Nbe.v1.1.chr11:121368334-121369944
+
Niben101Scf06017g00002.1
phosphate transporter 1%3B4
phosphate transporter 1;4
Nbe.v1.1.chr11g28340
Nbe.v1.1.chr11g28340.1
Nbe.v1.s00170g28340
Nbe.v1.1.chr11:48461721-48466602
-
Niben101Scf05183g04010.1
senescence-associated family protein%2C putative (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr11g30230
Nbe.v1.1.chr11g30230.1
Nbe.v1.s00170g30230
Nbe.v1.1.chr11:41274263-41275977
-
Niben101Scf08259g01002.1
RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-binding (RRM/RBD/RNP motifs) family protein
Nbe.v1.1.chr15g25670
Nbe.v1.1.chr15g25670.1
Nbe.v1.s00190g25670
Nbe.v1.1.chr15:89833151-89834097
+
Niben101Scf02249g01014.1
inter-alpha-trypsin inhibitor heavy chain-like protein
inter-alpha-trypsin inhibitor heavy chain-related
Nbe.v1.1.chr16g43040
Nbe.v1.1.chr16g43040.1
Nbe.v1.s00200g11630
Nbe.v1.1.chr16:30877883-30879025
+
senescence-associated-like protein (DUF581)
Protein of unknown function (DUF581)
Nbe.v1.1.chr15g39050
Nbe.v1.1.chr15g39050.1
Nbe.v1.s00210g06700
Nbe.v1.1.chr15:44139953-44140477
-
zinc knuckle (CCHC-type) family protein
NULL