N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 50

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g04000
Nbe.v1.1.chr17g04000.1
Nbe.v1.s00010g04000
Nbe.v1.1.chr17:175031832-175052842
+
Niben101Scf06912g00006.1
structural maintenance of chromosomes protein
NULL
Nbe.v1.1.chr06g05530
Nbe.v1.1.chr06g05530.1
Nbe.v1.s00020g05530
Nbe.v1.1.chr06:135288164-135315667
+
Niben101Scf01090g04021.1
Structural maintenance of chromosomes (SMC) family protein
Structural maintenance of chromosomes (SMC) family protein
Nbe.v1.1.chr05g07160
Nbe.v1.1.chr05g07160.1
Nbe.v1.s00030g07160
Nbe.v1.1.chr05:25454199-25456880
+
Niben101Scf01009g01017.1
centrosomal protein of 135 kDa-like protein
NULL
Nbe.v1.1.chr05g07170
Nbe.v1.1.chr05g07170.1
Nbe.v1.s00030g07170
Nbe.v1.1.chr05:25457595-25458536
+
Niben101Scf01009g01017.1
centrosomal protein of 135 kDa-like protein
NULL
Nbe.v1.1.chr05g22480
Nbe.v1.1.chr05g22480.1
Nbe.v1.s00030g22480
Nbe.v1.1.chr05:77211441-77221819
+
Niben101Scf02807g11016.1
early endosome antigen
NULL
Nbe.v1.1.chr09g14730
Nbe.v1.1.chr09g14730.1
Nbe.v1.s00040g14730
Nbe.v1.1.chr09:98397484-98406919
-
Niben101Scf00482g03012.1
ferric reductase-like transmembrane component family protein
ferric reductase-like transmembrane component family protein
Nbe.v1.1.chr09g22270
Nbe.v1.1.chr09g22270.1
Nbe.v1.s00040g22270
Nbe.v1.1.chr09:72957419-72960687
-
Niben101Scf01750g08006.1
BEL1-like homeodomain 1
BEL1-like homeodomain 1
Nbe.v1.1.chr09g28520
Nbe.v1.1.chr09g28520.1
Nbe.v1.s00040g28520
Nbe.v1.1.chr09:53544863-53548210
+
Niben101Scf02055g00009.1
NB-ARC domain-containing disease resistance protein
NULL
Nbe.v1.1.chr09g33170
Nbe.v1.1.chr09g33170.1
Nbe.v1.s00040g33170
Nbe.v1.1.chr09:37137956-37139682
+
Niben101Scf04099g05003.1
Uncharacterized protein family (UPF0497)
NULL
Nbe.v1.1.chr09g38520
Nbe.v1.1.chr09g38520.1
Nbe.v1.s00040g38520
Nbe.v1.1.chr09:17587578-17588078
+
basic region/leucine zipper transcription factor 16
basic region/leucine zipper transcription factor 16
Nbe.v1.1.chr10g03850
Nbe.v1.1.chr10g03850.1
Nbe.v1.s00050g03850
Nbe.v1.1.chr10:11482923-11484591
-
NB-ARC domain-containing disease resistance protein
NULL
Nbe.v1.1.chr10g07890
Nbe.v1.1.chr10g07890.1
Nbe.v1.s00050g07890
Nbe.v1.1.chr10:24004224-24006304
+
Niben101Scf07417g01015.1
TRAF-like superfamily protein
NULL
Nbe.v1.1.chr10g08070
Nbe.v1.1.chr10g08070.1
Nbe.v1.s00050g08070
Nbe.v1.1.chr10:24607395-24610425
-
Niben101Scf04907g01013.1
auxin response factor 1
auxin response factor 1
Nbe.v1.1.chr10g22430
Nbe.v1.1.chr10g22430.1
Nbe.v1.s00050g22430
Nbe.v1.1.chr10:75521537-75522666
-
Niben101Scf07691g00019.1
RGA-like 2
RGA-like 2
Nbe.v1.1.chr10g38320
Nbe.v1.1.chr10g38320.1
Nbe.v1.s00050g38320
Nbe.v1.1.chr10:130420752-130438821
-
Niben101Scf06912g00006.1
structural maintenance of chromosomes protein
NULL
Nbe.v1.1.chr19g07060
Nbe.v1.1.chr19g07060.1
Nbe.v1.s00060g07060
Nbe.v1.1.chr19:117087785-117095408
-
No description
Nbe.v1.1.chr19g07760
Nbe.v1.1.chr19g07760.1
Nbe.v1.s00060g07760
Nbe.v1.1.chr19:114714144-114715806
+
Niben101Scf13146g00034.1
RmlC-like cupins superfamily protein
RmlC-like cupins superfamily protein
Nbe.v1.1.chr19g09390
Nbe.v1.1.chr19g09390.1
Nbe.v1.s00060g09390
Nbe.v1.1.chr19:107675273-107675905
-
Niben101Scf00288g07005.1
Mitochondrial substrate carrier family protein
Mitochondrial substrate carrier family protein
Nbe.v1.1.chr19g14000
Nbe.v1.1.chr19g14000.1
Nbe.v1.s00060g14000
Nbe.v1.1.chr19:91042744-91079168
-
Niben101Scf05306g00007.1
structural maintenance of chromosomes protein
NULL
Nbe.v1.1.chr19g20720
Nbe.v1.1.chr19g20720.1
Nbe.v1.s00060g20720
Nbe.v1.1.chr19:68770005-68783691
+
Niben101Scf03104g03017.1
binding / calmodulin binding protein
NULL
Nbe.v1.1.chr19g42090
Nbe.v1.1.chr19g42090.1
Nbe.v1.s00060g42090
Nbe.v1.1.chr19:9768158-9776955
+
Niben101Scf06394g08021.1
kinetochore protein
NULL
Nbe.v1.1.chr12g09580
Nbe.v1.1.chr12g09580.1
Nbe.v1.s00070g09580
Nbe.v1.1.chr12:108981982-108984055
+
Niben101Scf05405g09001.1
TRAF-like superfamily protein
NULL
Nbe.v1.1.chr12g38240
Nbe.v1.1.chr12g38240.1
Nbe.v1.s00070g38240
Nbe.v1.1.chr12:18101801-18106752
-
Niben101Scf03282g07004.1
root FNR 2
root FNR 2
Nbe.v1.1.chr08g16120
Nbe.v1.1.chr08g16120.1
Nbe.v1.s00080g16120
Nbe.v1.1.chr08:55813111-55816599
+
related to ubiquitin 1
related to ubiquitin 1
Nbe.v1.1.chr02g14710
Nbe.v1.1.chr02g14710.1
Nbe.v1.s00090g14710
Nbe.v1.1.chr02:111387218-111396520
-
Niben101Scf01154g18013.1
kinesin-like calmodulin-binding protein (ZWICHEL)
kinesin-like calmodulin-binding protein (ZWICHEL)
Nbe.v1.1.chr02g16770
Nbe.v1.1.chr02g16770.1
Nbe.v1.s00090g16770
Nbe.v1.1.chr02:106852359-106863936
+
Niben101Scf02538g00006.1
kinetochore protein
NULL
Nbe.v1.1.chr02g33320
Nbe.v1.1.chr02g33320.1
Nbe.v1.s00090g33320
Nbe.v1.1.chr02:50285760-50287954
-
F-box family protein
F-box family protein
Nbe.v1.1.chr07g00450
Nbe.v1.1.chr07g00450.1
Nbe.v1.s00100g00450
Nbe.v1.1.chr07:140834668-140838570
+
Niben101Scf03548g02015.1
Zinc finger (C3HC4-type RING finger) family protein
NULL
Nbe.v1.1.chr07g01990
Nbe.v1.1.chr07g01990.1
Nbe.v1.s00100g01990
Nbe.v1.1.chr07:137309712-137311312
-
Niben101Scf08767g00001.1
Cytochrome P450 superfamily protein
Cytochrome P450 superfamily protein
Nbe.v1.1.chr18g04040
Nbe.v1.1.chr18g04040.1
Nbe.v1.s00110g04040
Nbe.v1.1.chr18:129398845-129405377
-
Niben101Scf02807g11016.1
early endosome antigen
NULL
Nbe.v1.1.chr18g32790
Nbe.v1.1.chr18g32790.1
Nbe.v1.s00110g32790
Nbe.v1.1.chr18:32761957-32763473
-
Niben101Scf02187g00009.1
hypothetical protein
NULL
Nbe.v1.1.chr18g38040
Nbe.v1.1.chr18g38040.1
Nbe.v1.s00110g38040
Nbe.v1.1.chr18:13133336-13136403
-
Niben101Scf00912g08004.1
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Nbe.v1.1.chr13g12150
Nbe.v1.1.chr13g12150.1
Nbe.v1.s00120g12150
Nbe.v1.1.chr13:35946241-35949142
-
Niben101Scf15972g02014.1
DNAJ heat shock N-terminal domain-containing protein
DNAJ heat shock N-terminal domain-containing protein
Nbe.v1.1.chr13g28350
Nbe.v1.1.chr13g28350.1
Nbe.v1.s00120g28350
Nbe.v1.1.chr13:83876370-83877332
-
Niben101Scf05437g03009.1
DUF868 family protein (DUF868)
Plant protein of unknown function (DUF868)
Nbe.v1.1.chr04g24650
Nbe.v1.1.chr04g24650.1
Nbe.v1.s00130g24650
Nbe.v1.1.chr04:31947441-31951046
-
Niben101Scf03804g01022.1
filament-like protein (DUF869)
NULL
Nbe.v1.1.chr04g25070
Nbe.v1.1.chr04g25070.1
Nbe.v1.s00130g25070
Nbe.v1.1.chr04:30446250-30447404
+
Niben101Scf05430g00010.1
ROH1%2C putative (DUF793)
Protein of unknown function (DUF793)
Nbe.v1.1.chr04g32250
Nbe.v1.1.chr04g32250.1
Nbe.v1.s00130g32250
Nbe.v1.1.chr04:7749766-7785356
-
Niben101Scf10747g00015.1
structural maintenance of chromosomes protein
NULL
Nbe.v1.1.chr14g11280
Nbe.v1.1.chr14g11280.1
Nbe.v1.s00140g11280
Nbe.v1.1.chr14:93715688-93716842
-
Niben101Scf02835g00007.1
ROH1%2C putative (DUF793)
Protein of unknown function (DUF793)
Nbe.v1.1.chr14g16290
Nbe.v1.1.chr14g16290.1
Nbe.v1.s00140g16290
Nbe.v1.1.chr14:77541777-77542022
+
Niben101Scf02358g03021.1
Membrane insertion protein%2C OxaA/YidC with tetratricopeptide repeat domain-containing protein
NULL
Nbe.v1.1.chr14g41970
Nbe.v1.1.chr14g41970.1
Nbe.v1.s00140g41970
Nbe.v1.1.chr14:1371249-1377602
+
Niben101Scf02972g01004.1
inner membrane OXA1-like protein
homolog of yeast oxidase assembly 1 (OXA1)
Nbe.v1.1.chr03g05810
Nbe.v1.1.chr03g05810.1
Nbe.v1.s00150g05810
Nbe.v1.1.chr03:19486289-19489447
-
Niben101Scf08263g04004.1
BEL1-like homeodomain 1
BEL1-like homeodomain 1
Nbe.v1.1.chr03g24550
Nbe.v1.1.chr03g24550.1
Nbe.v1.s00150g24550
Nbe.v1.1.chr03:87469189-87481381
+
Niben101Scf00595g04006.1
GPI-anchored adhesin-like protein
NULL
Nbe.v1.1.chr01g04680
Nbe.v1.1.chr01g04680.1
Nbe.v1.s00160g04680
Nbe.v1.1.chr01:117799843-117801049
-
HAUS augmin-like complex subunit
NULL
Nbe.v1.1.chr01g09570
Nbe.v1.1.chr01g09570.1
Nbe.v1.s00160g09570
Nbe.v1.1.chr01:100136575-100137789
+
Niben101Scf01415g01005.1
receptor-like kinase in in flowers 3
receptor-like kinase in in flowers 3
Nbe.v1.1.chr01g32750
Nbe.v1.1.chr01g32750.1
Nbe.v1.s00160g32750
Nbe.v1.1.chr01:30858341-30863591
-
Niben101Scf10560g00003.1
nuclear factor Y%2C subunit C11
nuclear factor Y, subunit C11
Nbe.v1.1.chr11g02770
Nbe.v1.1.chr11g02770.1
Nbe.v1.s00170g02770
Nbe.v1.1.chr11:124118831-124120765
-
Niben101Scf05301g04003.1
receptor-like kinase in in flowers 3
receptor-like kinase in in flowers 3
Nbe.v1.1.chr11g09100
Nbe.v1.1.chr11g09100.1
Nbe.v1.s00170g09100
Nbe.v1.1.chr11:105838460-105853816
+
Niben101Scf03239g05022.1
golgin Putative 4
golgin candidate 4
Nbe.v1.1.chr11g11240
Nbe.v1.1.chr11g11240.1
Nbe.v1.s00170g11240
Nbe.v1.1.chr11:99482886-99490775
+
Niben101Scf10556g00012.1
nuclear factor Y%2C subunit C11
nuclear factor Y, subunit C11
Nbe.v1.1.chr16g30280
Nbe.v1.1.chr16g30280.1
Nbe.v1.s00180g30280
Nbe.v1.1.chr16:177633591-177685756
+
Niben101Scf01090g04021.1
Structural maintenance of chromosomes (SMC) family protein
Structural maintenance of chromosomes (SMC) family protein
Nbe.v1.1.chr15g46220
Nbe.v1.1.chr15g46220.1
Nbe.v1.s00210g13870
Nbe.v1.1.chr15:14659701-14663024
-
Niben101Scf01994g02033.1
ROP interactive partner 3
NULL