N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 69

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g04630
Nbe.v1.1.chr17g04630.1
Nbe.v1.s00010g04630
Nbe.v1.1.chr17:173328923-173333523
+
SAP domain-containing protein
SAP domain-containing protein
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr06g39190
Nbe.v1.1.chr06g39190.1
Nbe.v1.s00020g39190
Nbe.v1.1.chr06:9702807-9707539
-
Niben101Scf02508g01001.1
Peptidase S41 family protein
Peptidase S41 family protein
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g04120
Nbe.v1.1.chr05g04120.1
Nbe.v1.s00030g04120
Nbe.v1.1.chr05:15243101-15244481
+
No description
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26770
Nbe.v1.1.chr09g26770.1
Nbe.v1.s00040g26770
Nbe.v1.1.chr09:59149188-59160417
-
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr10g19240
Nbe.v1.1.chr10g19240.1
Nbe.v1.s00050g19240
Nbe.v1.1.chr10:66467044-66467960
+
Niben101Scf02911g03016.1
phosphoenolpyruvate carboxylase%2C putative (DUF506)
Protein of unknown function (DUF506)
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g14840
Nbe.v1.1.chr19g14840.1
Nbe.v1.s00060g14840
Nbe.v1.1.chr19:88725592-88726382
+
mitochondrial editing factor 22
mitochondrial editing factor 22
Nbe.v1.1.chr19g20280
Nbe.v1.1.chr19g20280.1
Nbe.v1.s00060g20280
Nbe.v1.1.chr19:70177952-70181406
+
Niben101Scf05822g03006.1
DNA-binding bromodomain-containing protein
DNA-binding bromodomain-containing protein
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g41380
Nbe.v1.1.chr19g41380.1
Nbe.v1.s00060g41380
Nbe.v1.1.chr19:11453276-11481037
-
Niben101Scf08692g00005.1
DegP protease 7
DegP protease 7
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g19870
Nbe.v1.1.chr12g19870.1
Nbe.v1.s00070g19870
Nbe.v1.1.chr12:73043606-73045191
-
Niben101Scf01958g03001.1
DUF506 family protein (DUF506)
Protein of unknown function (DUF506)
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr08g08840
Nbe.v1.1.chr08g08840.1
Nbe.v1.s00080g08840
Nbe.v1.1.chr08:31757579-31763413
+
Niben101Scf14566g01008.1
Cellulose synthase family protein
Cellulose synthase family protein
Nbe.v1.1.chr08g18020
Nbe.v1.1.chr08g18020.1
Nbe.v1.s00080g18020
Nbe.v1.1.chr08:64221827-64222111
+
Niben101Scf07226g00001.1
glycine/proline-rich protein
glycine/proline-rich protein
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g19740
Nbe.v1.1.chr02g19740.1
Nbe.v1.s00090g19740
Nbe.v1.1.chr02:98823432-98864776
+
Niben101Scf08692g00005.1
DegP protease 7
DegP protease 7
Nbe.v1.1.chr07g01700
Nbe.v1.1.chr07g01700.1
Nbe.v1.s00100g01700
Nbe.v1.1.chr07:138136183-138136804
-
Niben101Scf06976g02010.1
Ribosomal protein L30/L7 family protein
Ribosomal protein L30/L7 family protein
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr18g07340
Nbe.v1.1.chr18g07340.1
Nbe.v1.s00110g07340
Nbe.v1.1.chr18:118837095-118837595
-
Integrase-type DNA-binding superfamily protein
NULL
Nbe.v1.1.chr18g38880
Nbe.v1.1.chr18g38880.1
Nbe.v1.s00110g38880
Nbe.v1.1.chr18:9647684-9658751
-
Niben101Scf03462g04002.1
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Nbe.v1.1.chr18g39350
Nbe.v1.1.chr18g39350.1
Nbe.v1.s00110g39350
Nbe.v1.1.chr18:8014607-8018198
+
Niben101Scf03977g03001.1
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr13g01460
Nbe.v1.1.chr13g01460.1
Nbe.v1.s00120g01460
Nbe.v1.1.chr13:4338407-4344017
-
Niben101Scf14566g01008.1
Cellulose synthase family protein
Cellulose synthase family protein
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g44040
Nbe.v1.1.chr13g44040.1
Nbe.v1.s00120g44040
Nbe.v1.1.chr13:125005475-125015578
-
Niben101Scf00759g01006.1
DegP protease 10
DegP protease 10
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr13g47300
Nbe.v1.1.chr13g47300.1
Nbe.v1.s00120g47300
Nbe.v1.1.chr13:136041616-136051996
-
Niben101Scf00542g07012.1
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g22590
Nbe.v1.1.chr04g22590.1
Nbe.v1.s00130g22590
Nbe.v1.1.chr04:38670807-38697817
-
Niben101Scf03425g02001.1
Ikzf5 (DUF668)
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g08670
Nbe.v1.1.chr14g08670.1
Nbe.v1.s00140g08670
Nbe.v1.1.chr14:102898089-102916796
-
Niben101Scf02597g04001.1
histone-lysine N-methyltransferase
histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35180
Nbe.v1.1.chr14g35180.1
Nbe.v1.s00140g35180
Nbe.v1.1.chr14:20953233-20953541
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g11590
Nbe.v1.1.chr03g11590.1
Nbe.v1.s00150g11590
Nbe.v1.1.chr03:39211031-39212995
+
Niben101Scf02015g04012.1
Chaperone DnaJ-domain superfamily protein
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g41860
Nbe.v1.1.chr03g41860.1
Nbe.v1.s00150g41860
Nbe.v1.1.chr03:126657095-126661550
-
Niben101Scf04046g01006.1
downstream target of AGL15-4
NULL
Nbe.v1.1.chr01g03970
Nbe.v1.1.chr01g03970.1
Nbe.v1.s00160g03970
Nbe.v1.1.chr01:120688800-120692196
-
Niben101Scf00415g07007.1
Pectin lyase-like superfamily protein
Pectin lyase-like superfamily protein
Nbe.v1.1.chr01g03980
Nbe.v1.1.chr01g03980.1
Nbe.v1.s00160g03980
Nbe.v1.1.chr01:120630143-120633876
-
Niben101Scf15310g00001.1
Pectin lyase-like superfamily protein
Pectin lyase-like superfamily protein
Nbe.v1.1.chr01g03990
Nbe.v1.1.chr01g03990.1
Nbe.v1.s00160g03990
Nbe.v1.1.chr01:120578345-120582083
-
Niben101Scf15310g00001.1
Pectin lyase-like superfamily protein
Pectin lyase-like superfamily protein
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g00040
Nbe.v1.1.chr11g00040.1
Nbe.v1.s00170g00040
Nbe.v1.1.chr11:131834526-131835107
+
Niben101Scf06628g01009.1
TSPO(outer membrane tryptophan-rich sensory protein)-like protein
TSPO(outer membrane tryptophan-rich sensory protein)-related
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8