N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 45

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g06210
Nbe.v1.1.chr17g06210.1
Nbe.v1.s00010g06210
Nbe.v1.1.chr17:168755083-168756191
-
Niben101Scf02702g00011.1
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
NULL
Nbe.v1.1.chr17g07580
Nbe.v1.1.chr17g07580.1
Nbe.v1.s00010g07580
Nbe.v1.1.chr17:164948570-164948974
-
gamma-irradiation and mitomycin c induced 1
gamma-irradiation and mitomycin c induced 1
Nbe.v1.1.chr17g32500
Nbe.v1.1.chr17g32500.1
Nbe.v1.s00010g32500
Nbe.v1.1.chr17:75045595-75047457
+
RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein
RNA helicase, ATP-dependent, SK12/DOB1 protein
Nbe.v1.1.chr17g32750
Nbe.v1.1.chr17g32750.1
Nbe.v1.s00010g32750
Nbe.v1.1.chr17:74168253-74173252
-
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr06g23160
Nbe.v1.1.chr06g23160.1
Nbe.v1.s00020g23160
Nbe.v1.1.chr06:70312823-70313359
-
outer envelope pore 24B-like protein
NULL
Nbe.v1.1.chr06g42490
Nbe.v1.1.chr06g42490.1
Nbe.v1.s00020g42490
Nbe.v1.1.chr06:1089079-1110793
-
Niben101Scf04958g00015.1
pleiotropic drug resistance 12
pleiotropic drug resistance 12
Nbe.v1.1.chr05g13680
Nbe.v1.1.chr05g13680.1
Nbe.v1.s00030g13680
Nbe.v1.1.chr05:46560716-46562246
-
LRR and NB-ARC domains-containing disease resistance protein
LRR and NB-ARC domains-containing disease resistance protein
Nbe.v1.1.chr09g21080
Nbe.v1.1.chr09g21080.1
Nbe.v1.s00040g21080
Nbe.v1.1.chr09:77076094-77081368
-
RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein
RNA helicase, ATP-dependent, SK12/DOB1 protein
Nbe.v1.1.chr09g31330
Nbe.v1.1.chr09g31330.1
Nbe.v1.s00040g31330
Nbe.v1.1.chr09:43008871-43009979
+
Niben101Scf02702g00011.1
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
NULL
Nbe.v1.1.chr10g12920
Nbe.v1.1.chr10g12920.1
Nbe.v1.s00050g12920
Nbe.v1.1.chr10:43699345-43700873
+
mitogen-activated protein kinase kinase kinase 3
mitogen-activated protein kinase kinase kinase 3
Nbe.v1.1.chr19g39410
Nbe.v1.1.chr19g39410.1
Nbe.v1.s00060g39410
Nbe.v1.1.chr19:16588462-16599797
-
Niben101Scf04773g00007.1
autophagy-like protein
NULL
Nbe.v1.1.chr12g35370
Nbe.v1.1.chr12g35370.1
Nbe.v1.s00070g35370
Nbe.v1.1.chr12:27479448-27480556
-
Niben101Scf02702g00011.1
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
NULL
Nbe.v1.1.chr08g00520
Nbe.v1.1.chr08g00520.1
Nbe.v1.s00080g00520
Nbe.v1.1.chr08:1548309-1561834
-
Niben101Scf09767g00001.1
ABC-2 type transporter family protein
ABC-2 type transporter family protein
Nbe.v1.1.chr08g01730
Nbe.v1.1.chr08g01730.1
Nbe.v1.s00080g01730
Nbe.v1.1.chr08:5309530-5309979
+
Niben101Scf01765g02005.1
B3 domain protein (DUF313)
Domain of unknown function (DUF313)
Nbe.v1.1.chr08g09550
Nbe.v1.1.chr08g09550.1
Nbe.v1.s00080g09550
Nbe.v1.1.chr08:33844082-33845190
+
Niben101Scf02702g00011.1
hypothetical protein
NULL
Nbe.v1.1.chr08g30930
Nbe.v1.1.chr08g30930.1
Nbe.v1.s00080g30930
Nbe.v1.1.chr08:111636965-111641855
+
Niben101Scf13926g00005.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Nbe.v1.1.chr02g40330
Nbe.v1.1.chr02g40330.1
Nbe.v1.s00090g40330
Nbe.v1.1.chr02:19370298-19381767
+
NmrA-like negative transcriptional regulator family protein
NmrA-like negative transcriptional regulator family protein
Nbe.v1.1.chr18g34300
Nbe.v1.1.chr18g34300.1
Nbe.v1.s00110g34300
Nbe.v1.1.chr18:27541702-27542103
+
RNA helicase%2C ATP-dependent%2C SK12/DOB1 protein
RNA helicase, ATP-dependent, SK12/DOB1 protein
Nbe.v1.1.chr18g35570
Nbe.v1.1.chr18g35570.1
Nbe.v1.s00110g35570
Nbe.v1.1.chr18:23151030-23151434
-
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr18g40600
Nbe.v1.1.chr18g40600.1
Nbe.v1.s00110g40600
Nbe.v1.1.chr18:3746356-3747615
-
proton pump interactor 1
proton pump interactor 1
Nbe.v1.1.chr13g17070
Nbe.v1.1.chr13g17070.1
Nbe.v1.s00120g17070
Nbe.v1.1.chr13:53746404-53748266
+
ABC-2 type transporter family protein
ABC-2 type transporter family protein
Nbe.v1.1.chr13g29230
Nbe.v1.1.chr13g29230.1
Nbe.v1.s00120g29230
Nbe.v1.1.chr13:85778676-85778948
+
ABC-2 type transporter family protein
ABC-2 type transporter family protein
Nbe.v1.1.chr04g14040
Nbe.v1.1.chr04g14040.1
Nbe.v1.s00130g14040
Nbe.v1.1.chr04:69205522-69206065
-
AP2/B3-like transcriptional factor family protein
NULL
Nbe.v1.1.chr04g32690
Nbe.v1.1.chr04g32690.1
Nbe.v1.s00130g32690
Nbe.v1.1.chr04:6793781-6794888
+
Niben101Scf02702g00011.1
multidrug resistance-associated protein 4
multidrug resistance-associated protein 4
Nbe.v1.1.chr04g34110
Nbe.v1.1.chr04g34110.1
Nbe.v1.s00130g34110
Nbe.v1.1.chr04:2954981-2962205
+
Niben101Scf06423g03031.1
2-phosphoglycolate phosphatase 2
2-phosphoglycolate phosphatase 2
Nbe.v1.1.chr14g13870
Nbe.v1.1.chr14g13870.1
Nbe.v1.s00140g13870
Nbe.v1.1.chr14:83894767-83904959
+
Zinc finger%2C C3HC4 type (RING finger) family protein
Zinc finger, C3HC4 type (RING finger) family protein
Nbe.v1.1.chr14g19320
Nbe.v1.1.chr14g19320.1
Nbe.v1.s00140g19320
Nbe.v1.1.chr14:69625075-69626243
-
Niben101Scf01765g02005.1
Pathogenesis-related thaumatin superfamily protein
Pathogenesis-related thaumatin superfamily protein
Nbe.v1.1.chr14g24860
Nbe.v1.1.chr14g24860.1
Nbe.v1.s00140g24860
Nbe.v1.1.chr14:52542173-52553993
+
Niben101Scf02479g03007.1
TIP41-like protein
NULL
Nbe.v1.1.chr14g29990
Nbe.v1.1.chr14g29990.1
Nbe.v1.s00140g29990
Nbe.v1.1.chr14:37416763-37421917
-
Niben101Scf01765g02005.1
B3 domain protein (DUF313)
Domain of unknown function (DUF313)
Nbe.v1.1.chr14g36620
Nbe.v1.1.chr14g36620.1
Nbe.v1.s00140g36620
Nbe.v1.1.chr14:16156607-16157715
-
Niben101Scf02702g00011.1
demeter-like 2
NULL
Nbe.v1.1.chr14g40990
Nbe.v1.1.chr14g40990.1
Nbe.v1.s00140g40990
Nbe.v1.1.chr14:4029159-4029443
+
B3 domain protein (DUF313)
Domain of unknown function (DUF313)
Nbe.v1.1.chr03g38740
Nbe.v1.1.chr03g38740.1
Nbe.v1.s00150g38740
Nbe.v1.1.chr03:120519440-120520247
+
Niben101Scf01765g02005.1
hypothetical protein
NULL
Nbe.v1.1.chr01g03900
Nbe.v1.1.chr01g03900.1
Nbe.v1.s00160g03900
Nbe.v1.1.chr01:120887853-120888209
-
AP2/B3-like transcriptional factor family protein
NULL
Nbe.v1.1.chr01g18550
Nbe.v1.1.chr01g18550.1
Nbe.v1.s00160g18550
Nbe.v1.1.chr01:66586363-66595156
+
Mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein
Nbe.v1.1.chr01g23480
Nbe.v1.1.chr01g23480.1
Nbe.v1.s00160g23480
Nbe.v1.1.chr01:52873752-52877640
-
Niben101Scf03906g02003.1
zinc finger/BTB domain protein%2C putative (DUF1644)
NULL
Nbe.v1.1.chr01g28800
Nbe.v1.1.chr01g28800.1
Nbe.v1.s00160g28800
Nbe.v1.1.chr01:39211100-39224132
+
Niben101Scf05351g02005.1
cytosolic invertase 1
cytosolic invertase 1
Nbe.v1.1.chr11g06420
Nbe.v1.1.chr11g06420.1
Nbe.v1.s00170g06420
Nbe.v1.1.chr11:113378408-113379215
+
No description
Nbe.v1.1.chr11g22190
Nbe.v1.1.chr11g22190.1
Nbe.v1.s00170g22190
Nbe.v1.1.chr11:71770691-71771146
+
Homeodomain-like protein
Homeodomain-like protein
Nbe.v1.1.chr11g23270
Nbe.v1.1.chr11g23270.1
Nbe.v1.s00170g23270
Nbe.v1.1.chr11:68736402-68737711
-
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Nbe.v1.1.chr11g35270
Nbe.v1.1.chr11g35270.1
Nbe.v1.s00170g35270
Nbe.v1.1.chr11:25420085-25424678
+
Niben101Scf22360g00002.1
Cupredoxin superfamily protein
Cupredoxin superfamily protein
Nbe.v1.1.chr16g23810
Nbe.v1.1.chr16g23810.1
Nbe.v1.s00180g23810
Nbe.v1.1.chr16:156995415-157006325
-
Niben101Scf03848g10008.1
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Nbe.v1.1.chr15g00050
Nbe.v1.1.chr15g00050.1
Nbe.v1.s00190g00050
Nbe.v1.1.chr15:176820332-176820703
-
histone deacetylase 6
histone deacetylase 6
Nbe.v1.1.chr15g00130
Nbe.v1.1.chr15g00130.1
Nbe.v1.s00190g00130
Nbe.v1.1.chr15:176684994-176695490
+
Phototropic-responsive NPH3 family protein
Phototropic-responsive NPH3 family protein
Nbe.v1.1.chr15g32030
Nbe.v1.1.chr15g32030.1
Nbe.v1.s00190g32030
Nbe.v1.1.chr15:67797893-67814195
-
polygalacturonase inhibiting protein 1
polygalacturonase inhibiting protein 1
Nbe.v1.1.chr16g35430
Nbe.v1.1.chr16g35430.1
Nbe.v1.s00200g04020
Nbe.v1.1.chr16:10148388-10154425
+
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein