N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 77

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g00670
Nbe.v1.1.chr17g00670.1
Nbe.v1.s00010g00670
Nbe.v1.1.chr17:183097460-183103262
-
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr17g01710
Nbe.v1.1.chr17g01710.1
Nbe.v1.s00010g01710
Nbe.v1.1.chr17:180707600-180710376
-
Niben101Scf01435g00008.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr17g02190
Nbe.v1.1.chr17g02190.1
Nbe.v1.s00010g02190
Nbe.v1.1.chr17:179609160-179616017
-
Niben101Scf08411g00019.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr17g04440
Nbe.v1.1.chr17g04440.1
Nbe.v1.s00010g04440
Nbe.v1.1.chr17:173729113-173746695
+
Niben101Scf02569g03013.1
Sec1/munc18-like (SM) proteins superfamily
Sec1/munc18-like (SM) proteins superfamily
Nbe.v1.1.chr17g05250
Nbe.v1.1.chr17g05250.1
Nbe.v1.s00010g05250
Nbe.v1.1.chr17:171549056-171554413
+
Niben101Scf11743g00009.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr17g21550
Nbe.v1.1.chr17g21550.1
Nbe.v1.s00010g21550
Nbe.v1.1.chr17:113358592-113360485
-
Niben101Scf04044g13018.1
Phosphoinositide phosphatase family protein
Phosphoinositide phosphatase family protein
Nbe.v1.1.chr17g25300
Nbe.v1.1.chr17g25300.1
Nbe.v1.s00010g25300
Nbe.v1.1.chr17:99821000-99824573
+
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr06g09250
Nbe.v1.1.chr06g09250.1
Nbe.v1.s00020g09250
Nbe.v1.1.chr06:122683062-122683667
-
myosin heavy chain-like protein
myosin heavy chain-related
Nbe.v1.1.chr06g19360
Nbe.v1.1.chr06g19360.1
Nbe.v1.s00020g19360
Nbe.v1.1.chr06:84841658-84855721
+
Niben101Scf05319g05002.1
RING/U-box superfamily protein
RING/U-box superfamily protein
Nbe.v1.1.chr06g22460
Nbe.v1.1.chr06g22460.1
Nbe.v1.s00020g22460
Nbe.v1.1.chr06:73231035-73233882
+
Niben101Scf00674g00009.1
armadillo repeat only 2
armadillo repeat only 2
Nbe.v1.1.chr06g31230
Nbe.v1.1.chr06g31230.1
Nbe.v1.s00020g31230
Nbe.v1.1.chr06:40432954-40448596
+
Niben101Scf00960g15006.1
acetyl-CoA carboxylase 1
acetyl-CoA carboxylase 1
Nbe.v1.1.chr06g32500
Nbe.v1.1.chr06g32500.1
Nbe.v1.s00020g32500
Nbe.v1.1.chr06:35882597-35887610
-
Niben101Scf02011g03011.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr05g03090
Nbe.v1.1.chr05g03090.1
Nbe.v1.s00030g03090
Nbe.v1.1.chr05:11931727-11935577
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr05g18020
Nbe.v1.1.chr05g18020.1
Nbe.v1.s00030g18020
Nbe.v1.1.chr05:62228867-62230529
-
Niben101Scf04174g01008.1
glutathione S-transferase TAU 19
glutathione S-transferase TAU 19
Nbe.v1.1.chr05g22570
Nbe.v1.1.chr05g22570.1
Nbe.v1.s00030g22570
Nbe.v1.1.chr05:77563902-77573671
+
Niben101Scf04894g00024.1
Topoisomerase II-associated protein PAT1
Topoisomerase II-associated protein PAT1
Nbe.v1.1.chr05g37740
Nbe.v1.1.chr05g37740.1
Nbe.v1.s00030g37740
Nbe.v1.1.chr05:139613334-139614350
-
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr09g16830
Nbe.v1.1.chr09g16830.1
Nbe.v1.s00040g16830
Nbe.v1.1.chr09:89992453-89994985
-
Niben101Scf13118g00028.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr09g26620
Nbe.v1.1.chr09g26620.1
Nbe.v1.s00040g26620
Nbe.v1.1.chr09:59812368-59814686
-
Niben101Scf00261g00005.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g26940
Nbe.v1.1.chr09g26940.1
Nbe.v1.s00040g26940
Nbe.v1.1.chr09:58641290-58641759
-
Niben101Scf15227g00003.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr09g31190
Nbe.v1.1.chr09g31190.1
Nbe.v1.s00040g31190
Nbe.v1.1.chr09:43690137-43698478
-
Niben101Scf05014g00018.1
myosin-binding protein%2C putative (Protein of unknown function%2C DUF593)
Protein of unknown function, DUF593
Nbe.v1.1.chr10g00900
Nbe.v1.1.chr10g00900.1
Nbe.v1.s00050g00900
Nbe.v1.1.chr10:2354412-2357570
+
Niben101Scf06326g00032.1
monogalactosyldiacylglycerol synthase 2
monogalactosyldiacylglycerol synthase 2
Nbe.v1.1.chr10g07650
Nbe.v1.1.chr10g07650.1
Nbe.v1.s00050g07650
Nbe.v1.1.chr10:22816426-22819140
-
Niben101Scf00674g00009.1
armadillo repeat only 2
armadillo repeat only 2
Nbe.v1.1.chr10g21640
Nbe.v1.1.chr10g21640.1
Nbe.v1.s00050g21640
Nbe.v1.1.chr10:73245499-73249895
-
Niben101Scf12797g00006.1
glycosyl hydrolase 9B10
glycosyl hydrolase 9B10
Nbe.v1.1.chr10g40920
Nbe.v1.1.chr10g40920.1
Nbe.v1.s00050g40920
Nbe.v1.1.chr10:139479472-139486167
-
Niben101Scf09458g00004.1
glycosyl hydrolase 9B14
glycosyl hydrolase 9B14
Nbe.v1.1.chr10g41730
Nbe.v1.1.chr10g41730.1
Nbe.v1.s00050g41730
Nbe.v1.1.chr10:141514294-141515015
+
Niben101Scf11588g00009.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr10g41740
Nbe.v1.1.chr10g41740.1
Nbe.v1.s00050g41740
Nbe.v1.1.chr10:141528611-141534336
+
Niben101Scf11588g00024.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g13580
Nbe.v1.1.chr19g13580.1
Nbe.v1.s00060g13580
Nbe.v1.1.chr19:92250814-92256577
-
Niben101Scf07850g04002.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr19g24930
Nbe.v1.1.chr19g24930.1
Nbe.v1.s00060g24930
Nbe.v1.1.chr19:51947268-51952020
+
Niben101Scf06529g06013.1
glycosyl hydrolase 9C2
glycosyl hydrolase 9C2
Nbe.v1.1.chr19g26050
Nbe.v1.1.chr19g26050.1
Nbe.v1.s00060g26050
Nbe.v1.1.chr19:49354472-49357019
+
Niben101Scf07253g02010.1
AMP-dependent synthetase and ligase family protein
AMP-dependent synthetase and ligase family protein
Nbe.v1.1.chr19g26070
Nbe.v1.1.chr19g26070.1
Nbe.v1.s00060g26070
Nbe.v1.1.chr19:49276401-49278296
-
Niben101Scf07253g02010.1
AMP-dependent synthetase and ligase family protein
AMP-dependent synthetase and ligase family protein
Nbe.v1.1.chr19g29630
Nbe.v1.1.chr19g29630.1
Nbe.v1.s00060g29630
Nbe.v1.1.chr19:40605178-40609579
+
Niben101Scf07070g02027.1
nodulin MtN21 /EamA-like transporter family protein
nodulin MtN21 /EamA-like transporter family protein
Nbe.v1.1.chr19g45110
Nbe.v1.1.chr19g45110.1
Nbe.v1.s00060g45110
Nbe.v1.1.chr19:1956444-1959621
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr12g03310
Nbe.v1.1.chr12g03310.1
Nbe.v1.s00070g03310
Nbe.v1.1.chr12:131341289-131355899
-
Niben101Scf09955g01007.1
callose synthase 5
callose synthase 5
Nbe.v1.1.chr12g30840
Nbe.v1.1.chr12g30840.1
Nbe.v1.s00070g30840
Nbe.v1.1.chr12:41836373-41836747
-
Niben101Scf00177g02008.1
glycosyl hydrolase 9C3
glycosyl hydrolase 9C3
Nbe.v1.1.chr12g31230
Nbe.v1.1.chr12g31230.1
Nbe.v1.s00070g31230
Nbe.v1.1.chr12:40794428-40796407
+
Niben101Scf08723g01003.1
armadillo repeat only 2
armadillo repeat only 2
Nbe.v1.1.chr12g34640
Nbe.v1.1.chr12g34640.1
Nbe.v1.s00070g34640
Nbe.v1.1.chr12:29590765-29593787
-
Niben101Scf04570g01005.1
S-locus lectin protein kinase family protein
S-locus lectin protein kinase family protein
Nbe.v1.1.chr02g02070
Nbe.v1.1.chr02g02070.1
Nbe.v1.s00090g02070
Nbe.v1.1.chr02:138703297-138713191
-
Niben101Scf07070g02027.1
nodulin MtN21 /EamA-like transporter family protein
nodulin MtN21 /EamA-like transporter family protein
Nbe.v1.1.chr02g08100
Nbe.v1.1.chr02g08100.1
Nbe.v1.s00090g08100
Nbe.v1.1.chr02:125784122-125786252
-
Niben101Scf00180g08002.1
plant/protein (DUF810)
Protein of unknown function (DUF810)
Nbe.v1.1.chr02g13130
Nbe.v1.1.chr02g13130.1
Nbe.v1.s00090g13130
Nbe.v1.1.chr02:114723469-114729609
+
Niben101Scf00271g09022.1
Transducin/WD40 repeat-like superfamily protein
Transducin/WD40 repeat-like superfamily protein
Nbe.v1.1.chr02g19160
Nbe.v1.1.chr02g19160.1
Nbe.v1.s00090g19160
Nbe.v1.1.chr02:100355275-100357543
+
Niben101Scf03735g03010.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr02g19330
Nbe.v1.1.chr02g19330.1
Nbe.v1.s00090g19330
Nbe.v1.1.chr02:99772849-99774828
-
Niben101Scf02583g06016.1
armadillo repeat only 2
armadillo repeat only 2
Nbe.v1.1.chr02g28700
Nbe.v1.1.chr02g28700.1
Nbe.v1.s00090g28700
Nbe.v1.1.chr02:69049592-69051224
+
Niben101Scf03842g01014.1
Ribosomal protein S26e family protein
Ribosomal protein S26e family protein
Nbe.v1.1.chr02g43110
Nbe.v1.1.chr02g43110.1
Nbe.v1.s00090g43110
Nbe.v1.1.chr02:6751844-6755160
-
Niben101Scf06436g04005.1
DNAJ homologue 2
DNAJ homologue 2
Nbe.v1.1.chr07g17110
Nbe.v1.1.chr07g17110.1
Nbe.v1.s00100g17110
Nbe.v1.1.chr07:73325496-73334691
+
Niben101Scf05549g02005.1
Chaperone protein htpG family protein
Chaperone protein htpG family protein
Nbe.v1.1.chr07g21090
Nbe.v1.1.chr07g21090.1
Nbe.v1.s00100g21090
Nbe.v1.1.chr07:59402836-59405808
-
Niben101Scf02714g00005.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr07g25000
Nbe.v1.1.chr07g25000.1
Nbe.v1.s00100g25000
Nbe.v1.1.chr07:45258560-45259120
+
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr18g07070
Nbe.v1.1.chr18g07070.1
Nbe.v1.s00110g07070
Nbe.v1.1.chr18:120091080-120096183
+
Niben101Scf08133g00002.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr13g17470
Nbe.v1.1.chr13g17470.1
Nbe.v1.s00120g17470
Nbe.v1.1.chr13:54996290-54998526
+
Niben101Scf00148g01009.1
glycosyl hydrolase 9B1
glycosyl hydrolase 9B1
Nbe.v1.1.chr13g19570
Nbe.v1.1.chr13g19570.1
Nbe.v1.s00120g19570
Nbe.v1.1.chr13:61782211-61787958
-
Niben101Scf04096g09005.1
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Nbe.v1.1.chr13g44160
Nbe.v1.1.chr13g44160.1
Nbe.v1.s00120g44160
Nbe.v1.1.chr13:125367537-125376706
+
Niben101Scf02405g02005.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g12830
Nbe.v1.1.chr04g12830.1
Nbe.v1.s00130g12830
Nbe.v1.1.chr04:73732594-73737933
+
Niben101Scf00152g25013.1
glycosyl hydrolase 9B5
NULL
Nbe.v1.1.chr04g24380
Nbe.v1.1.chr04g24380.1
Nbe.v1.s00130g24380
Nbe.v1.1.chr04:33120485-33125842
-
Niben101Scf11110g00025.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr04g25990
Nbe.v1.1.chr04g25990.1
Nbe.v1.s00130g25990
Nbe.v1.1.chr04:26706985-26725624
-
Niben101Scf03595g10006.1
Succinyl-CoA ligase%2C alpha subunit
Succinyl-CoA ligase, alpha subunit
Nbe.v1.1.chr04g26260
Nbe.v1.1.chr04g26260.1
Nbe.v1.s00130g26260
Nbe.v1.1.chr04:25944244-25948320
-
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g10000
Nbe.v1.1.chr14g10000.1
Nbe.v1.s00140g10000
Nbe.v1.1.chr14:98058660-98065111
-
Niben101Scf20768g00031.1
Six-hairpin glycosidases superfamily protein
Six-hairpin glycosidases superfamily protein
Nbe.v1.1.chr14g12670
Nbe.v1.1.chr14g12670.1
Nbe.v1.s00140g12670
Nbe.v1.1.chr14:88359332-88363447
+
Niben101Scf03595g01001.1
glycosyl hydrolase 9C1
glycosyl hydrolase 9C1
Nbe.v1.1.chr14g29190
Nbe.v1.1.chr14g29190.1
Nbe.v1.s00140g29190
Nbe.v1.1.chr14:39459750-39461063
-
Niben101Scf00286g01001.1
CBL-interacting protein kinase 7
CBL-interacting protein kinase 7
Nbe.v1.1.chr14g34930
Nbe.v1.1.chr14g34930.1
Nbe.v1.s00140g34930
Nbe.v1.1.chr14:21941964-21942254
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr14g35250
Nbe.v1.1.chr14g35250.1
Nbe.v1.s00140g35250
Nbe.v1.1.chr14:20827870-20828205
-
Niben101Scf01418g01002.1
F-box/RNI-like superfamily protein
F-box/RNI-like superfamily protein
Nbe.v1.1.chr14g35300
Nbe.v1.1.chr14g35300.1
Nbe.v1.s00140g35300
Nbe.v1.1.chr14:20769177-20771494
+
Niben101Scf01418g02009.1
glycosyl hydrolase 9A4
NULL
Nbe.v1.1.chr03g18250
Nbe.v1.1.chr03g18250.1
Nbe.v1.s00150g18250
Nbe.v1.1.chr03:66987282-66990359
+
Niben101Scf01184g16001.1
cellulase 3
cellulase 3
Nbe.v1.1.chr03g33120
Nbe.v1.1.chr03g33120.1
Nbe.v1.s00150g33120
Nbe.v1.1.chr03:108559688-108560938
+
Niben101Scf04407g02021.1
voltage dependent anion channel 1
voltage dependent anion channel 1
Nbe.v1.1.chr03g36340
Nbe.v1.1.chr03g36340.1
Nbe.v1.s00150g36340
Nbe.v1.1.chr03:115508858-115511233
-
Niben101Scf00063g08003.1
ER membrane protein%2C putative (DUF962)
NULL
Nbe.v1.1.chr03g36430
Nbe.v1.1.chr03g36430.1
Nbe.v1.s00150g36430
Nbe.v1.1.chr03:115841133-115843869
-
Niben101Scf00063g11003.1
cycling DOF factor 3
cycling DOF factor 3
Nbe.v1.1.chr03g41920
Nbe.v1.1.chr03g41920.1
Nbe.v1.s00150g41920
Nbe.v1.1.chr03:126883433-126906789
-
Niben101Scf10650g01008.1
ARM repeat superfamily protein
NULL
Nbe.v1.1.chr01g01780
Nbe.v1.1.chr01g01780.1
Nbe.v1.s00160g01780
Nbe.v1.1.chr01:127493920-127497453
-
Niben101Scf01105g04014.1
No description
Nbe.v1.1.chr01g12710
Nbe.v1.1.chr01g12710.1
Nbe.v1.s00160g12710
Nbe.v1.1.chr01:87206296-87209008
-
Niben101Scf04753g01003.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr01g26090
Nbe.v1.1.chr01g26090.1
Nbe.v1.s00160g26090
Nbe.v1.1.chr01:45800159-45803251
-
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr01g44520
Nbe.v1.1.chr01g44520.1
Nbe.v1.s00160g44520
Nbe.v1.1.chr01:3195951-3205036
-
Niben101Scf04664g01005.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g04940
Nbe.v1.1.chr11g04940.1
Nbe.v1.s00170g04940
Nbe.v1.1.chr11:117735565-117737983
+
Niben101Scf01623g01025.1
glycosyl hydrolase 9B13
glycosyl hydrolase 9B13
Nbe.v1.1.chr11g16300
Nbe.v1.1.chr11g16300.1
Nbe.v1.s00170g16300
Nbe.v1.1.chr11:87450491-87456111
-
Niben101Scf21401g00003.1
glycosyl hydrolase 9B18
glycosyl hydrolase 9B18
Nbe.v1.1.chr11g18080
Nbe.v1.1.chr11g18080.1
Nbe.v1.s00170g18080
Nbe.v1.1.chr11:82585464-82588864
+
Niben101Scf03753g00018.1
glycosyl hydrolase 9A1
glycosyl hydrolase 9A1
Nbe.v1.1.chr11g34790
Nbe.v1.1.chr11g34790.1
Nbe.v1.s00170g34790
Nbe.v1.1.chr11:26979350-26988445
+
Niben101Scf13259g00023.1
nitrate excretion transporter1
nitrate excretion transporter1
Nbe.v1.1.chr11g43230
Nbe.v1.1.chr11g43230.1
Nbe.v1.s00170g43230
Nbe.v1.1.chr11:533565-535135
+
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Nbe.v1.1.chr16g11910
Nbe.v1.1.chr16g11910.1
Nbe.v1.s00180g11910
Nbe.v1.1.chr16:112665612-112672268
-
Niben101Scf07048g01011.1
PHD finger protein-like protein
PHD finger protein-related
Nbe.v1.1.chr15g12810
Nbe.v1.1.chr15g12810.1
Nbe.v1.s00190g12810
Nbe.v1.1.chr15:135671956-135676761
+
Niben101Scf05692g04001.1
glycosyl hydrolase 9B8
glycosyl hydrolase 9B8
Nbe.v1.1.chr16g35410
Nbe.v1.1.chr16g35410.1
Nbe.v1.s00200g04000
Nbe.v1.1.chr16:10107648-10112920
+
Niben101Scf09262g01016.1
fatty acid biosynthesis 1
fatty acid biosynthesis 1