N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 73

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g01930
Nbe.v1.1.chr17g01930.1
Nbe.v1.s00010g01930
Nbe.v1.1.chr17:180221445-180224210
-
Niben101Scf08819g01014.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr17g01940
Nbe.v1.1.chr17g01940.1
Nbe.v1.s00010g01940
Nbe.v1.1.chr17:180192223-180196614
-
Niben101Scf08819g01015.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr17g13180
Nbe.v1.1.chr17g13180.1
Nbe.v1.s00010g13180
Nbe.v1.1.chr17:146696758-146713405
-
Niben101Scf08665g01006.1
K+ efflux antiporter 2
K+ efflux antiporter 2
Nbe.v1.1.chr17g53690
Nbe.v1.1.chr17g53690.1
Nbe.v1.s00010g53690
Nbe.v1.1.chr17:2284586-2286302
+
NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598)
NULL
Nbe.v1.1.chr06g01790
Nbe.v1.1.chr06g01790.1
Nbe.v1.s00020g01790
Nbe.v1.1.chr06:146550177-146586322
+
Niben101Scf09004g02028.1
Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
Rho GTPase activation protein (RhoGAP) with PH domain
Nbe.v1.1.chr06g02120
Nbe.v1.1.chr06g02120.1
Nbe.v1.s00020g02120
Nbe.v1.1.chr06:145459990-145460733
+
Niben101Scf04869g05007.1
DEK carboxy-terminal domain protein
NULL
Nbe.v1.1.chr06g09430
Nbe.v1.1.chr06g09430.1
Nbe.v1.s00020g09430
Nbe.v1.1.chr06:121945152-121948299
+
Niben101Scf00861g07009.1
FASCICLIN-like arabinogalactan protein 17 precursor
FASCICLIN-like arabinogalactan protein 17 precursor
Nbe.v1.1.chr06g22180
Nbe.v1.1.chr06g22180.1
Nbe.v1.s00020g22180
Nbe.v1.1.chr06:74377806-74380266
+
Niben101Scf10022g00012.1
cation/H+ exchanger 2
cation/H+ exchanger 2
Nbe.v1.1.chr06g25500
Nbe.v1.1.chr06g25500.1
Nbe.v1.s00020g25500
Nbe.v1.1.chr06:61514454-61515714
-
Niben101Scf06578g02010.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr06g25510
Nbe.v1.1.chr06g25510.1
Nbe.v1.s00020g25510
Nbe.v1.1.chr06:61512929-61514318
-
Niben101Scf06578g02010.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr06g32380
Nbe.v1.1.chr06g32380.1
Nbe.v1.s00020g32380
Nbe.v1.1.chr06:36451922-36455055
-
Niben101Scf00572g00003.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr05g07790
Nbe.v1.1.chr05g07790.1
Nbe.v1.s00030g07790
Nbe.v1.1.chr05:27186844-27195114
-
Niben101Scf00713g04014.1
cation/H+ exchanger 20
cation/H+ exchanger 20
Nbe.v1.1.chr05g12570
Nbe.v1.1.chr05g12570.1
Nbe.v1.s00030g12570
Nbe.v1.1.chr05:42626941-42629532
-
Niben101Scf08758g00012.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr05g12820
Nbe.v1.1.chr05g12820.1
Nbe.v1.s00030g12820
Nbe.v1.1.chr05:43722440-43725559
-
Niben101Scf00401g01015.1
cation/H+ exchanger 24
cation/H+ exchanger 24
Nbe.v1.1.chr05g26870
Nbe.v1.1.chr05g26870.1
Nbe.v1.s00030g26870
Nbe.v1.1.chr05:94372820-94381819
+
Niben101Scf02220g05009.1
casein lytic proteinase B4
casein lytic proteinase B4
Nbe.v1.1.chr09g06840
Nbe.v1.1.chr09g06840.1
Nbe.v1.s00040g06840
Nbe.v1.1.chr09:125293033-125296584
-
Niben101Scf01484g00009.1
FASCICLIN-like arabinogalactan protein 17 precursor
FASCICLIN-like arabinogalactan protein 17 precursor
Nbe.v1.1.chr09g13500
Nbe.v1.1.chr09g13500.1
Nbe.v1.s00040g13500
Nbe.v1.1.chr09:102344996-102348236
-
Niben101Scf10022g00012.1
cation/H+ exchanger 2
cation/H+ exchanger 2
Nbe.v1.1.chr09g19800
Nbe.v1.1.chr09g19800.1
Nbe.v1.s00040g19800
Nbe.v1.1.chr09:81639848-81643344
+
Niben101Scf06311g01001.1
cation/hydrogen exchanger 14
cation/hydrogen exchanger 14
Nbe.v1.1.chr09g28880
Nbe.v1.1.chr09g28880.1
Nbe.v1.s00040g28880
Nbe.v1.1.chr09:52101017-52104142
-
Niben101Scf02736g01003.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr09g31330
Nbe.v1.1.chr09g31330.1
Nbe.v1.s00040g31330
Nbe.v1.1.chr09:43008871-43009979
+
Niben101Scf02702g00011.1
kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
NULL
Nbe.v1.1.chr09g39610
Nbe.v1.1.chr09g39610.1
Nbe.v1.s00040g39610
Nbe.v1.1.chr09:13543385-13544170
-
Niben101Scf00078g02007.1
protein GENOMES UNCOUPLED 4
enzyme binding;tetrapyrrole binding
Nbe.v1.1.chr10g21310
Nbe.v1.1.chr10g21310.1
Nbe.v1.s00050g21310
Nbe.v1.1.chr10:72384400-72387776
+
Niben101Scf11337g00010.1
cation/H+ exchanger 3
cation/H+ exchanger 3
Nbe.v1.1.chr10g26110
Nbe.v1.1.chr10g26110.1
Nbe.v1.s00050g26110
Nbe.v1.1.chr10:87901320-87903937
-
Niben101Scf01771g01024.1
Excinuclease ABC%2C C subunit%2C N-terminal
Excinuclease ABC, C subunit, N-terminal
Nbe.v1.1.chr10g27140
Nbe.v1.1.chr10g27140.1
Nbe.v1.s00050g27140
Nbe.v1.1.chr10:90696424-90704289
-
Niben101Scf13429g03010.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr10g32590
Nbe.v1.1.chr10g32590.1
Nbe.v1.s00050g32590
Nbe.v1.1.chr10:110588497-110594078
-
Niben101Scf05414g01004.1
coiled-coil protein (DUF572)
Family of unknown function (DUF572)
Nbe.v1.1.chr10g41230
Nbe.v1.1.chr10g41230.1
Nbe.v1.s00050g41230
Nbe.v1.1.chr10:140236977-140239737
-
Niben101Scf08819g01014.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr19g08970
Nbe.v1.1.chr19g08970.1
Nbe.v1.s00060g08970
Nbe.v1.1.chr19:109402790-109405591
+
Niben101Scf08758g00012.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr19g09410
Nbe.v1.1.chr19g09410.1
Nbe.v1.s00060g09410
Nbe.v1.1.chr19:107653187-107655139
+
Niben101Scf00401g01015.1
cation/H+ exchanger 25
cation/H+ exchanger 25
Nbe.v1.1.chr19g14660
Nbe.v1.1.chr19g14660.1
Nbe.v1.s00060g14660
Nbe.v1.1.chr19:89123595-89126346
+
Niben101Scf00713g04014.1
cation/H+ exchanger 20
NULL
Nbe.v1.1.chr19g25160
Nbe.v1.1.chr19g25160.1
Nbe.v1.s00060g25160
Nbe.v1.1.chr19:51279946-51282304
-
Niben101Scf00572g00003.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr19g25170
Nbe.v1.1.chr19g25170.1
Nbe.v1.s00060g25170
Nbe.v1.1.chr19:51279436-51279921
-
Niben101Scf05438g01001.1
cation/H+ exchanger 18
cation/H+ exchanger 18
Nbe.v1.1.chr19g39860
Nbe.v1.1.chr19g39860.1
Nbe.v1.s00060g39860
Nbe.v1.1.chr19:15257279-15258231
+
Niben101Scf03455g00006.1
cation/H+ exchanger 17
NULL
Nbe.v1.1.chr19g39870
Nbe.v1.1.chr19g39870.1
Nbe.v1.s00060g39870
Nbe.v1.1.chr19:15256287-15256733
+
Niben101Scf03455g00006.1
cation/H+ exchanger 17
NULL
Nbe.v1.1.chr12g39340
Nbe.v1.1.chr12g39340.1
Nbe.v1.s00070g39340
Nbe.v1.1.chr12:14426720-14428842
-
Niben101Scf02638g03003.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr12g39460
Nbe.v1.1.chr12g39460.1
Nbe.v1.s00070g39460
Nbe.v1.1.chr12:14102325-14145684
-
Niben101Scf12405g00019.1
casein lytic proteinase B4
casein lytic proteinase B4
Nbe.v1.1.chr12g42370
Nbe.v1.1.chr12g42370.1
Nbe.v1.s00070g42370
Nbe.v1.1.chr12:5636789-5637931
+
Niben101Scf03156g04001.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr12g42380
Nbe.v1.1.chr12g42380.1
Nbe.v1.s00070g42380
Nbe.v1.1.chr12:5629613-5636386
+
Niben101Scf03156g04001.1
cation/hydrogen exchanger 14
cation/hydrogen exchanger 14
Nbe.v1.1.chr08g32340
Nbe.v1.1.chr08g32340.1
Nbe.v1.s00080g32340
Nbe.v1.1.chr08:117265001-117311364
+
Niben101Scf03978g06001.1
ARM repeat superfamily protein
ARM repeat superfamily protein
Nbe.v1.1.chr08g33790
Nbe.v1.1.chr08g33790.1
Nbe.v1.s00080g33790
Nbe.v1.1.chr08:122506022-122508149
+
Niben101Scf01721g00009.1
cation/H+ exchanger 4
cation/H+ exchanger 4
Nbe.v1.1.chr08g37040
Nbe.v1.1.chr08g37040.1
Nbe.v1.s00080g37040
Nbe.v1.1.chr08:133718718-133726991
-
Niben101Scf02348g07001.1
GDSL-like lipase/acylhydrolase superfamily protein
NULL
Nbe.v1.1.chr02g12010
Nbe.v1.1.chr02g12010.1
Nbe.v1.s00090g12010
Nbe.v1.1.chr02:117202010-117203131
+
Niben101Scf01785g08006.1
cation/H+ exchanger 18
cation/H+ exchanger 18
Nbe.v1.1.chr02g12020
Nbe.v1.1.chr02g12020.1
Nbe.v1.s00090g12020
Nbe.v1.1.chr02:117198916-117201651
+
Niben101Scf01785g08006.1
cation/H+ exchanger 17
NULL
Nbe.v1.1.chr02g28090
Nbe.v1.1.chr02g28090.1
Nbe.v1.s00090g28090
Nbe.v1.1.chr02:71395303-71398754
-
Niben101Scf03156g04001.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr02g32970
Nbe.v1.1.chr02g32970.1
Nbe.v1.s00090g32970
Nbe.v1.1.chr02:52213958-52217234
-
Niben101Scf02107g06002.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr18g11560
Nbe.v1.1.chr18g11560.1
Nbe.v1.s00110g11560
Nbe.v1.1.chr18:103503860-103506705
-
Niben101Scf04995g00014.1
Protein kinase superfamily protein
Protein kinase superfamily protein
Nbe.v1.1.chr18g28560
Nbe.v1.1.chr18g28560.1
Nbe.v1.s00110g28560
Nbe.v1.1.chr18:44079199-44082896
+
THO2
NULL
Nbe.v1.1.chr18g32000
Nbe.v1.1.chr18g32000.1
Nbe.v1.s00110g32000
Nbe.v1.1.chr18:34335285-34339461
+
Niben101Scf10628g00011.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr18g32640
Nbe.v1.1.chr18g32640.1
Nbe.v1.s00110g32640
Nbe.v1.1.chr18:32988890-32993221
+
Niben101Scf10628g00011.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr13g23090
Nbe.v1.1.chr13g23090.1
Nbe.v1.s00120g23090
Nbe.v1.1.chr13:70994666-70997980
+
Niben101Scf06625g02012.1
YELLOW STRIPE like 2
YELLOW STRIPE like 2
Nbe.v1.1.chr13g35900
Nbe.v1.1.chr13g35900.1
Nbe.v1.s00120g35900
Nbe.v1.1.chr13:101708366-101711792
+
Niben101Scf12932g00002.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr14g33810
Nbe.v1.1.chr14g33810.1
Nbe.v1.s00140g33810
Nbe.v1.1.chr14:25439205-25442383
-
Niben101Scf01731g09009.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr14g41840
Nbe.v1.1.chr14g41840.1
Nbe.v1.s00140g41840
Nbe.v1.1.chr14:1623543-1627790
+
Niben101Scf12932g00002.1
cation/H+ exchanger 18
NULL
Nbe.v1.1.chr03g13980
Nbe.v1.1.chr03g13980.1
Nbe.v1.s00150g13980
Nbe.v1.1.chr03:50717910-50720977
+
Niben101Scf00819g00002.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr03g24050
Nbe.v1.1.chr03g24050.1
Nbe.v1.s00150g24050
Nbe.v1.1.chr03:86262360-86270169
+
cysteine-rich RECEPTOR-like kinase
NULL
Nbe.v1.1.chr01g01380
Nbe.v1.1.chr01g01380.1
Nbe.v1.s00160g01380
Nbe.v1.1.chr01:129132968-129134145
+
Niben101Scf17552g00003.1
Ankyrin repeat family protein with DHHC zinc finger domain-containing protein
Ankyrin repeat family protein with DHHC zinc finger domain
Nbe.v1.1.chr01g43840
Nbe.v1.1.chr01g43840.1
Nbe.v1.s00160g43840
Nbe.v1.1.chr01:4791095-4791634
+
Niben101Scf10628g00011.1
cation/H+ exchanger 19
NULL
Nbe.v1.1.chr11g05290
Nbe.v1.1.chr11g05290.1
Nbe.v1.s00170g05290
Nbe.v1.1.chr11:116781078-116783444
-
Niben101Scf01623g12020.1
myb domain protein 111
myb domain protein 111
Nbe.v1.1.chr11g36780
Nbe.v1.1.chr11g36780.1
Nbe.v1.s00170g36780
Nbe.v1.1.chr11:20036591-20044946
-
Niben101Scf00956g01005.1
SAUR-like auxin-responsive protein family
SAUR-like auxin-responsive protein family
Nbe.v1.1.chr16g17050
Nbe.v1.1.chr16g17050.1
Nbe.v1.s00180g17050
Nbe.v1.1.chr16:132755627-132760189
-
Niben101Scf14883g00006.1
cation/hydrogen exchanger 28
cation/hydrogen exchanger 28
Nbe.v1.1.chr16g17060
Nbe.v1.1.chr16g17060.1
Nbe.v1.s00180g17060
Nbe.v1.1.chr16:132760960-132761973
-
Niben101Scf14883g00006.1
cation/hydrogen exchanger 28
cation/hydrogen exchanger 28
Nbe.v1.1.chr16g18960
Nbe.v1.1.chr16g18960.1
Nbe.v1.s00180g18960
Nbe.v1.1.chr16:140092937-140096702
-
Niben101Scf12017g00009.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr16g26680
Nbe.v1.1.chr16g26680.1
Nbe.v1.s00180g26680
Nbe.v1.1.chr16:165418696-165421754
-
Niben101Scf03634g11004.1
FASCICLIN-like arabinogalactan protein 17 precursor
FASCICLIN-like arabinogalactan protein 17 precursor
Nbe.v1.1.chr16g29140
Nbe.v1.1.chr16g29140.1
Nbe.v1.s00180g29140
Nbe.v1.1.chr16:173810616-173812080
-
low-molecular-weight cysteine-rich 18
low-molecular-weight cysteine-rich 18
Nbe.v1.1.chr16g31240
Nbe.v1.1.chr16g31240.1
Nbe.v1.s00180g31240
Nbe.v1.1.chr16:180204950-180217249
+
Niben101Scf00961g04008.1
myb domain protein 3r-4
NULL
Nbe.v1.1.chr15g07580
Nbe.v1.1.chr15g07580.1
Nbe.v1.s00190g07580
Nbe.v1.1.chr15:152397947-152403479
+
Niben101Scf10628g00011.1
proteinaceous RNase P 2
proteinaceous RNase P 2
Nbe.v1.1.chr15g08660
Nbe.v1.1.chr15g08660.1
Nbe.v1.s00190g08660
Nbe.v1.1.chr15:149131372-149141429
-
Niben101Scf02318g01005.1
transcriptional regulator ATRX-like protein
NULL
Nbe.v1.1.chr15g26300
Nbe.v1.1.chr15g26300.1
Nbe.v1.s00190g26300
Nbe.v1.1.chr15:86997161-87001086
-
Niben101Scf11337g00010.1
cation/H+ exchanger 3
cation/H+ exchanger 3
Nbe.v1.1.chr15g31570
Nbe.v1.1.chr15g31570.1
Nbe.v1.s00190g31570
Nbe.v1.1.chr15:69174958-69175524
+
Niben101Scf13429g03010.1
cation/hydrogen exchanger 15
cation/hydrogen exchanger 15
Nbe.v1.1.chr16g34830
Nbe.v1.1.chr16g34830.1
Nbe.v1.s00200g03420
Nbe.v1.1.chr16:8473868-8475672
-
Niben101Scf00108g01009.1
cytokinin-responsive gata factor 1
cytokinin-responsive gata factor 1
Nbe.v1.1.chr16g39610
Nbe.v1.1.chr16g39610.1
Nbe.v1.s00200g08200
Nbe.v1.1.chr16:21694957-21697309
+
Niben101Scf06311g01001.1
cation/hydrogen exchanger 14
cation/hydrogen exchanger 14
Nbe.v1.1.chr15g38740
Nbe.v1.1.chr15g38740.1
Nbe.v1.s00210g06390
Nbe.v1.1.chr15:45633056-45637475
+
Niben101Scf05222g04018.1
growth-regulating factor 4
growth-regulating factor 4
Nbe.v1.1.chr15g41240
Nbe.v1.1.chr15g41240.1
Nbe.v1.s00210g08890
Nbe.v1.1.chr15:33976329-33979512
+
Niben101Scf03757g02001.1
FASCICLIN-like arabinogalactan protein 17 precursor
FASCICLIN-like arabinogalactan protein 17 precursor
Nbe.v1.1.chr15g41900
Nbe.v1.1.chr15g41900.1
Nbe.v1.s00210g09550
Nbe.v1.1.chr15:31333893-31337889
-
Niben101Scf03018g09011.1
cation/hydrogen exchanger 28
cation/hydrogen exchanger 28