N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 35

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr17g18900
Nbe.v1.1.chr17g18900.1
Nbe.v1.s00010g18900
Nbe.v1.1.chr17:123423348-123424206
-
cytochrome P450 family protein
cytochrome P450, family 708, subfamily A, polypeptide 1
Nbe.v1.1.chr17g23210
Nbe.v1.1.chr17g23210.1
Nbe.v1.s00010g23210
Nbe.v1.1.chr17:106843963-106861881
+
Niben101Scf01784g03001.1
abscisic acid responsive elements-binding factor 2
abscisic acid responsive elements-binding factor 2
Nbe.v1.1.chr17g23840
Nbe.v1.1.chr17g23840.1
Nbe.v1.s00010g23840
Nbe.v1.1.chr17:104741120-104748370
+
Niben101Scf05688g10001.1
glyceraldehyde-3-phosphate dehydrogenase of plastid 2
glyceraldehyde-3-phosphate dehydrogenase of plastid 2
Nbe.v1.1.chr06g05900
Nbe.v1.1.chr06g05900.1
Nbe.v1.s00020g05900
Nbe.v1.1.chr06:134134484-134139739
-
Niben101Scf05516g04026.1
no pollen germination related 2
NULL
Nbe.v1.1.chr09g17250
Nbe.v1.1.chr09g17250.1
Nbe.v1.s00040g17250
Nbe.v1.1.chr09:88966991-88967866
+
Niben101Scf20914g00001.1
EID1-like 3
EID1-like 3
Nbe.v1.1.chr09g21010
Nbe.v1.1.chr09g21010.1
Nbe.v1.s00040g21010
Nbe.v1.1.chr09:77534335-77544764
+
Niben101Scf04640g03006.1
tetratricopeptide repeat (TPR)-containing protein
NULL
Nbe.v1.1.chr09g39970
Nbe.v1.1.chr09g39970.1
Nbe.v1.s00040g39970
Nbe.v1.1.chr09:11585148-11589954
-
Niben101Scf00809g00007.1
no pollen germination related 2
NULL
Nbe.v1.1.chr10g23250
Nbe.v1.1.chr10g23250.1
Nbe.v1.s00050g23250
Nbe.v1.1.chr10:78496711-78506554
+
Niben101Scf01188g05004.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr19g30500
Nbe.v1.1.chr19g30500.1
Nbe.v1.s00060g30500
Nbe.v1.1.chr19:38749691-38756285
-
Niben101Scf01448g02005.1
proline-rich receptor-like kinase%2C putative (DUF1421)
Protein of unknown function (DUF1421)
Nbe.v1.1.chr12g06790
Nbe.v1.1.chr12g06790.1
Nbe.v1.s00070g06790
Nbe.v1.1.chr12:118429322-118430994
-
myosin heavy chain-like protein
myosin heavy chain-related
Nbe.v1.1.chr12g22200
Nbe.v1.1.chr12g22200.1
Nbe.v1.s00070g22200
Nbe.v1.1.chr12:67067348-67077969
-
Niben101Scf01188g05004.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr12g43440
Nbe.v1.1.chr12g43440.1
Nbe.v1.s00070g43440
Nbe.v1.1.chr12:3322470-3328011
+
Niben101Scf09792g00021.1
no pollen germination related 2
NULL
Nbe.v1.1.chr02g01590
Nbe.v1.1.chr02g01590.1
Nbe.v1.s00090g01590
Nbe.v1.1.chr02:139824326-139830801
+
Niben101Scf02585g00029.1
proline-rich receptor-like kinase%2C putative (DUF1421)
Protein of unknown function (DUF1421)
Nbe.v1.1.chr02g05750
Nbe.v1.1.chr02g05750.1
Nbe.v1.s00090g05750
Nbe.v1.1.chr02:130496649-130500854
-
Niben101Scf02145g09006.1
aspartic proteinase A1
aspartic proteinase A1
Nbe.v1.1.chr02g10380
Nbe.v1.1.chr02g10380.1
Nbe.v1.s00090g10380
Nbe.v1.1.chr02:120165597-120168869
+
Niben101Scf14458g00008.1
O-fucosyltransferase family protein
O-fucosyltransferase family protein
Nbe.v1.1.chr02g29650
Nbe.v1.1.chr02g29650.1
Nbe.v1.s00090g29650
Nbe.v1.1.chr02:66308236-66313465
+
Niben101Scf09792g00021.1
no pollen germination related 2
NULL
Nbe.v1.1.chr18g06150
Nbe.v1.1.chr18g06150.1
Nbe.v1.s00110g06150
Nbe.v1.1.chr18:122838887-122845776
-
Niben101Scf15326g00019.1
hypothetical protein
NULL
Nbe.v1.1.chr18g12880
Nbe.v1.1.chr18g12880.1
Nbe.v1.s00110g12880
Nbe.v1.1.chr18:99426991-99430028
+
Niben101Scf03449g01013.1
no pollen germination related 1
no pollen germination related 1
Nbe.v1.1.chr13g26770
Nbe.v1.1.chr13g26770.1
Nbe.v1.s00120g26770
Nbe.v1.1.chr13:80227644-80229630
+
Niben101Scf00338g08013.1
40s ribosomal protein SA B
40s ribosomal protein SA B
Nbe.v1.1.chr04g06850
Nbe.v1.1.chr04g06850.1
Nbe.v1.s00130g06850
Nbe.v1.1.chr04:101143839-101144454
+
Niben101Scf15326g00019.1
hypothetical protein
NULL
Nbe.v1.1.chr04g16920
Nbe.v1.1.chr04g16920.1
Nbe.v1.s00130g16920
Nbe.v1.1.chr04:58864990-58867902
-
Niben101Scf03449g01013.1
no pollen germination related 1
NULL
Nbe.v1.1.chr04g27550
Nbe.v1.1.chr04g27550.1
Nbe.v1.s00130g27550
Nbe.v1.1.chr04:21060212-21065153
+
Niben101Scf00193g01002.1
sec7 domain-containing protein
sec7 domain-containing protein
Nbe.v1.1.chr03g04490
Nbe.v1.1.chr03g04490.1
Nbe.v1.s00150g04490
Nbe.v1.1.chr03:14958291-14963127
+
Niben101Scf00809g00007.1
no pollen germination related 2
NULL
Nbe.v1.1.chr01g01270
Nbe.v1.1.chr01g01270.1
Nbe.v1.s00160g01270
Nbe.v1.1.chr01:129274921-129286592
+
Niben101Scf01188g05004.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr01g07200
Nbe.v1.1.chr01g07200.1
Nbe.v1.s00160g07200
Nbe.v1.1.chr01:107440652-107441098
+
RHO guanyl-nucleotide exchange factor 14
RHO guanyl-nucleotide exchange factor 14
Nbe.v1.1.chr01g08870
Nbe.v1.1.chr01g08870.1
Nbe.v1.s00160g08870
Nbe.v1.1.chr01:102494407-102496020
+
Niben101Scf06017g00002.1
phosphate transporter 1%3B4
phosphate transporter 1;4
Nbe.v1.1.chr11g01240
Nbe.v1.1.chr11g01240.1
Nbe.v1.s00170g01240
Nbe.v1.1.chr11:128229918-128240065
-
Niben101Scf01188g05004.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Tetratricopeptide repeat (TPR)-like superfamily protein
Nbe.v1.1.chr11g01280
Nbe.v1.1.chr11g01280.1
Nbe.v1.s00170g01280
Nbe.v1.1.chr11:128139155-128155524
+
Niben101Scf03592g01011.1
Protein prenylyltransferase superfamily protein
Protein prenylyltransferase superfamily protein
Nbe.v1.1.chr11g01290
Nbe.v1.1.chr11g01290.1
Nbe.v1.s00170g01290
Nbe.v1.1.chr11:128091313-128101499
+
Niben101Scf03592g01011.1
Protein prenylyltransferase superfamily protein
NULL
Nbe.v1.1.chr11g38390
Nbe.v1.1.chr11g38390.1
Nbe.v1.s00170g38390
Nbe.v1.1.chr11:15029737-15030561
-
Niben101Scf00202g04006.1
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
NULL
Nbe.v1.1.chr16g11510
Nbe.v1.1.chr16g11510.1
Nbe.v1.s00180g11510
Nbe.v1.1.chr16:111657669-111659006
+
Niben101Scf00015g00005.1
No description
Nbe.v1.1.chr16g29880
Nbe.v1.1.chr16g29880.1
Nbe.v1.s00180g29880
Nbe.v1.1.chr16:176419681-176424582
-
Niben101Scf13185g01010.1
no pollen germination related 2
NULL
Nbe.v1.1.chr15g09830
Nbe.v1.1.chr15g09830.1
Nbe.v1.s00190g09830
Nbe.v1.1.chr15:144346329-144357812
-
Niben101Scf01992g00007.1
Pentatricopeptide repeat (PPR) superfamily protein
Pentatricopeptide repeat (PPR) superfamily protein
Nbe.v1.1.chr16g42640
Nbe.v1.1.chr16g42640.1
Nbe.v1.s00200g11230
Nbe.v1.1.chr16:29677762-29678637
-
Niben101Scf20914g00001.1
EID1-like 3
EID1-like 3
Nbe.v1.1.chr15g49070
Nbe.v1.1.chr15g49070.1
Nbe.v1.s00210g16720
Nbe.v1.1.chr15:5076422-5081602
-
Niben101Scf02393g01003.1
RNA-binding protein 47B
RNA-binding protein 47B