N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 4

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr10g21010
Nbe.v1.1.chr10g21010.1
Nbe.v1.s00050g21010
Nbe.v1.1.chr10:71680246-71683437
+
Niben101Scf00454g05002.1
metacaspase 1
metacaspase 1
Nbe.v1.1.chr10g21020
Nbe.v1.1.chr10g21020.1
Nbe.v1.s00050g21020
Nbe.v1.1.chr10:71747405-71749847
+
Niben101Scf00454g05003.1
metacaspase 1
metacaspase 1
Nbe.v1.1.chr13g16080
Nbe.v1.1.chr13g16080.1
Nbe.v1.s00120g16080
Nbe.v1.1.chr13:49760529-49775425
-
Niben101Scf04926g03003.1
metacaspase 1
metacaspase 1
Nbe.v1.1.chr15g26100
Nbe.v1.1.chr15g26100.1
Nbe.v1.s00190g26100
Nbe.v1.1.chr15:87525504-87525986
-
Niben101Scf08179g01016.1
metacaspase 1
metacaspase 1