N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 6

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
81643	Nbe.v1.1.chr10g18730	Nbe.v1.1.chr10g18730.1	Nbe.v1.s00050g18730	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:64842555-64843293	-	Niben101Scf09052g03004.1	AT5G36260.1	Eukaryotic aspartyl protease family protein	Eukaryotic aspartyl protease family protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
18842	Nbe.v1.1.chr19g19870	Nbe.v1.1.chr19g19870.1	Nbe.v1.s00060g19870	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:72217872-72218446	-	Niben101Scf06909g02011.1	AT2G05642.1	Nucleic acid-binding%2C OB-fold-like protein	Nucleic acid-binding, OB-fold-like protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
19889	Nbe.v1.1.chr19g30350	Nbe.v1.1.chr19g30350.1	Nbe.v1.s00060g30350	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:39014060-39014706	-	Niben101Scf09052g03004.1	AT2G05642.1	Nucleic acid-binding%2C OB-fold-like protein	Nucleic acid-binding, OB-fold-like protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
53767	Nbe.v1.1.chr18g05120	Nbe.v1.1.chr18g05120.1	Nbe.v1.s00110g05120	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr18:125453338-125453827	-	Niben101Scf06909g02011.1	AT2G25910.1	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
61412	Nbe.v1.1.chr16g18070	Nbe.v1.1.chr16g18070.1	Nbe.v1.s00180g18070	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr16:136293350-136299499	-	Niben101Scf09052g03004.1	AT1G09020.1	sucrose nonfermenting-like protein	homolog of yeast sucrose nonfermenting 4	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
64366	Nbe.v1.1.chr15g16080	Nbe.v1.1.chr15g16080.1	Nbe.v1.s00190g16080	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr15:125972797-125973039	+	Niben101Scf09052g03004.1	AT2G41220.1	glutamate synthase 2	glutamate synthase 2	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries