N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 8

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr09g12740
Nbe.v1.1.chr09g12740.1
Nbe.v1.s00040g12740
Nbe.v1.1.chr09:105471292-105471695
+
No description
Nbe.v1.1.chr19g22110
Nbe.v1.1.chr19g22110.1
Nbe.v1.s00060g22110
Nbe.v1.1.chr19:62562803-62564645
+
No description
Nbe.v1.1.chr12g05720
Nbe.v1.1.chr12g05720.1
Nbe.v1.s00070g05720
Nbe.v1.1.chr12:122094104-122094895
+
No description
Nbe.v1.1.chr12g13000
Nbe.v1.1.chr12g13000.1
Nbe.v1.s00070g13000
Nbe.v1.1.chr12:95941861-95946096
-
No description
Nbe.v1.1.chr13g38820
Nbe.v1.1.chr13g38820.1
Nbe.v1.s00120g38820
Nbe.v1.1.chr13:109422219-109422844
-
No description
Nbe.v1.1.chr16g13060
Nbe.v1.1.chr16g13060.1
Nbe.v1.s00180g13060
Nbe.v1.1.chr16:116734669-116736783
-
No description
Nbe.v1.1.chr16g28810
Nbe.v1.1.chr16g28810.1
Nbe.v1.s00180g28810
Nbe.v1.1.chr16:172893806-172895709
+
Copia-like polyprotein/retrotransposon
NULL
Nbe.v1.1.chr15g21220
Nbe.v1.1.chr15g21220.1
Nbe.v1.s00190g21220
Nbe.v1.1.chr15:106258354-106261178
+
No description