N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 7

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr09g07360
Nbe.v1.1.chr09g07360.1
Nbe.v1.s00040g07360
Nbe.v1.1.chr09:123584446-123587571
-
Translation elongation factor EFG/EF2 protein
Translation elongation factor EFG/EF2 protein
Nbe.v1.1.chr09g13140
Nbe.v1.1.chr09g13140.1
Nbe.v1.s00040g13140
Nbe.v1.1.chr09:103327889-103328188
+
zinc finger (Ran-binding) family protein
zinc finger (Ran-binding) family protein
Nbe.v1.1.chr12g03140
Nbe.v1.1.chr12g03140.1
Nbe.v1.s00070g03140
Nbe.v1.1.chr12:132064131-132065114
-
hypothetical protein
NULL
Nbe.v1.1.chr18g05130
Nbe.v1.1.chr18g05130.1
Nbe.v1.s00110g05130
Nbe.v1.1.chr18:125391523-125394392
-
PIF1 helicase
PIF1 helicase
Nbe.v1.1.chr13g35770
Nbe.v1.1.chr13g35770.1
Nbe.v1.s00120g35770
Nbe.v1.1.chr13:101324895-101325143
+
alpha/beta-Hydrolases superfamily protein
alpha/beta-Hydrolases superfamily protein
Nbe.v1.1.chr11g14530
Nbe.v1.1.chr11g14530.1
Nbe.v1.s00170g14530
Nbe.v1.1.chr11:91592599-91593039
+
1-deoxy-D-xylulose 5-phosphate reductoisomerase
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Nbe.v1.1.chr15g16060
Nbe.v1.1.chr15g16060.1
Nbe.v1.s00190g16060
Nbe.v1.1.chr15:125991599-125993178
+
aspartate/glutamate/uridylate kinase family protein
aspartate/glutamate/uridylate kinase family protein