N. benthamiana Gene Annotations

Nbe_v1.1 Gene ID

Nbe_v1.1 Gene model

Nbe.v1 Gene ID

Niben1.01 Gene ID

At gene ID

At Gene description (regex)

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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

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Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles

Search results: 5

ID	Nbe.v1.1 gene ID	Nbe.v1.1 gene model	Nbe.v1 gene ID	Sequence	IGV	Locus	Direction	Niben1.01 gene ID	At gene model	At gene description (TAIR10)	At gene description (ARAPORT11)	Blast	Expression profiles
33173	Nbe.v1.1.chr17g26790	Nbe.v1.1.chr17g26790.1	Nbe.v1.s00010g26790	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr17:94886124-94888556	+	Niben101Scf16150g00002.1	AT1G70520.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
81041	Nbe.v1.1.chr10g12680	Nbe.v1.1.chr10g12680.1	Nbe.v1.s00050g12680	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr10:42632583-42641321	+	Niben101Scf13000g02002.1	AT5G40380.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 42	cysteine-rich RLK (RECEPTOR-like protein kinase) 42	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
19886	Nbe.v1.1.chr19g30320	Nbe.v1.1.chr19g30320.1	Nbe.v1.s00060g30320	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr19:39082691-39087476	-	Niben101Scf17164g00028.1	AT5G40380.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 42	cysteine-rich RLK (RECEPTOR-like protein kinase) 42	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
46499	Nbe.v1.1.chr07g18900	Nbe.v1.1.chr07g18900.1	Nbe.v1.s00100g18900	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr07:67010080-67012566	-	Niben101Scf16150g00002.1	AT1G70520.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries
55717	Nbe.v1.1.chr18g24670	Nbe.v1.1.chr18g24670.1	Nbe.v1.s00110g24670	Sequence CDS Amino Acid Genome (+-10 kb)	IGV	Nbe.v1.1.chr18:57710566-57712985	+	Niben101Scf01984g00024.1	AT1G70520.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	blast Nbe_v1.1 genome Nbe_v1.1 transcripts blastn Nbe_v1.1 transcripts tblastx Niben1.01 transcript blastn Niben1.01 transcript tblastx At transcript blastn At transcript tblastx	Expression Profiles Grafting timeseries