N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

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Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 5

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g39690
Nbe.v1.1.chr06g39690.1
Nbe.v1.s00020g39690
Nbe.v1.1.chr06:8335175-8345693
+
Niben101Scf03488g06017.1
magnesium transporter NIPA (DUF803)
NULL
Nbe.v1.1.chr19g03420
Nbe.v1.1.chr19g03420.1
Nbe.v1.s00060g03420
Nbe.v1.1.chr19:132564877-132568838
+
Niben101Scf07498g02019.1
magnesium transporter%2C putative (DUF803)
Protein of unknown function (DUF803)
Nbe.v1.1.chr08g21920
Nbe.v1.1.chr08g21920.1
Nbe.v1.s00080g21920
Nbe.v1.1.chr08:78747994-78751720
+
Niben101Scf02439g00030.1
5'-AMP-activated protein kinase-like protein
5'-AMP-activated protein kinase-related
Nbe.v1.1.chr18g27650
Nbe.v1.1.chr18g27650.1
Nbe.v1.s00110g27650
Nbe.v1.1.chr18:47342667-47345941
-
Niben101Scf02439g00030.1
5'-AMP-activated protein kinase-like protein
5'-AMP-activated protein kinase-related
Nbe.v1.1.chr11g00910
Nbe.v1.1.chr11g00910.1
Nbe.v1.s00170g00910
Nbe.v1.1.chr11:129373541-129378425
+
Niben101Scf08478g00017.1
magnesium transporter%2C putative (DUF803)
Protein of unknown function (DUF803)