N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 4

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g30190
Nbe.v1.1.chr06g30190.1
Nbe.v1.s00020g30190
Nbe.v1.1.chr06:44950379-44951951
-
No description
Nbe.v1.1.chr10g20270
Nbe.v1.1.chr10g20270.1
Nbe.v1.s00050g20270
Nbe.v1.1.chr10:69466927-69467247
+
cyclin/Brf1-like TBP-binding domain-containing protein
transcription regulators;translation initiation factors;zinc ion binding;transcription activators
Nbe.v1.1.chr07g25610
Nbe.v1.1.chr07g25610.1
Nbe.v1.s00100g25610
Nbe.v1.1.chr07:42749394-42753873
+
GAG/POL/ENV polyprotein
GAG/POL/ENV polyprotein
Nbe.v1.1.chr18g22570
Nbe.v1.1.chr18g22570.1
Nbe.v1.s00110g22570
Nbe.v1.1.chr18:65033469-65034002
-
Actin-binding FH2 (formin homology 2) family protein
Actin-binding FH2 (formin homology 2) family protein