N. benthamiana Gene Annotations




List limit is fixed at 20. If Search results is more than 20, some records will not be displayed, so please reconsider your search criteria (recommend) or change List limit value (too many items take much time to display).

"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 4

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr06g20770
Nbe.v1.1.chr06g20770.1
Nbe.v1.s00020g20770
Nbe.v1.1.chr06:79861274-79861663
+
Translation elongation factor EFG/EF2 protein
Translation elongation factor EFG/EF2 protein
Nbe.v1.1.chr05g35310
Nbe.v1.1.chr05g35310.1
Nbe.v1.s00030g35310
Nbe.v1.1.chr05:128167503-128168207
+
bZIP transcription factor%2C putative (DUF1664)
Protein of unknown function (DUF1664)
Nbe.v1.1.chr10g40800
Nbe.v1.1.chr10g40800.1
Nbe.v1.s00050g40800
Nbe.v1.1.chr10:139392089-139396687
+
Niben101Scf02334g01023.1
AGAMOUS-like 65
NULL
Nbe.v1.1.chr12g34560
Nbe.v1.1.chr12g34560.1
Nbe.v1.s00070g34560
Nbe.v1.1.chr12:29867930-29871944
+
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
Cleavage and polyadenylation specificity factor (CPSF) A subunit protein