N. benthamiana Gene Annotations




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"At transcript ID" indicate the top hit genes in the tBlastx search of the CDS sequence of Nbe.v1 against ARAPORT11.

Blast searches that can be performed from this page are fixed to eValue 10 or less. A separate window will open and it will take some time before the results are displayed. Please do not close the window until the results are displayed.


Download gene list

Show CDS fasta (from list)

Show AA fasta (from list)

Phylogenetic analysis (CDS)

Phylogenetic analysis (AA)

Expression profiles



Search results: 5

ID
Nbe.v1.1 gene ID
Nbe.v1.1 gene model
Nbe.v1 gene ID
Sequence
IGV
Locus
Direction
Niben1.01 gene ID
At gene model
At gene description (TAIR10)
At gene description (ARAPORT11)
Blast
Expression profiles
Nbe.v1.1.chr05g16410
Nbe.v1.1.chr05g16410.1
Nbe.v1.s00030g16410
Nbe.v1.1.chr05:56028958-56035149
+
Niben101Scf01959g07012.1
GTP-binding family protein
GTP-binding family protein
Nbe.v1.1.chr08g09080
Nbe.v1.1.chr08g09080.1
Nbe.v1.s00080g09080
Nbe.v1.1.chr08:32592015-32594247
-
Niben101Scf09742g00030.1
O-fucosyltransferase family protein
O-fucosyltransferase family protein
Nbe.v1.1.chr08g37600
Nbe.v1.1.chr08g37600.1
Nbe.v1.s00080g37600
Nbe.v1.1.chr08:136154914-136160166
+
Niben101Scf01980g12016.1
O-fucosyltransferase family protein
O-fucosyltransferase family protein
Nbe.v1.1.chr18g32630
Nbe.v1.1.chr18g32630.1
Nbe.v1.s00110g32630
Nbe.v1.1.chr18:32999917-33002832
-
Niben101Scf00033g07005.1
O-fucosyltransferase family protein
O-fucosyltransferase family protein
Nbe.v1.1.chr15g09240
Nbe.v1.1.chr15g09240.1
Nbe.v1.s00190g09240
Nbe.v1.1.chr15:146376172-146381685
+
Niben101Scf01959g07012.1
GTP-binding family protein
GTP-binding family protein